@article{UBHD-68384294, author={Bischof, Lisa and Jakobi, Tobias}, title={Early response of Sulfolobus acidocaldarius to nutrient limitation}, year={2019}, pages={17 S.}, language={eng}, issn={2235-2988}, volume={9(2019) Artikel-Nummer 3201}, number={17 Seiten}, note={Gesehen am 03.05.2019}, journal={Frontiers in Cellular and Infection Microbiology}, doi={10.3389/fmicb.2018.03201}, } @article{UBHD-68395329, author={Blackwood, Erik A. and Sandmann, Christoph and M{\"u}ller, Oliver J. and Jakobi, Tobias and Dieterich, Christoph and Katus, Hugo and Doroudgar, Shirin}, title={ATF6 regulates cardiac hypertrophy by transcriptional induction of the mTORC1 activator, Rheb}, year={2019}, pages={79-93}, language={eng}, issn={1524-4571}, volume={124}, number={1}, note={Gesehen am 10.06.2019}, journal={Circulation research}, doi={10.1161/CIRCRESAHA.118.313854}, } @article{UBHD-68671406, author={Blackwood, Erik A. and Thuerauf, Donna J. and Stastna, Miroslava and Stephens, Haley and Sand, Zoe and Pentoney, Amber and Azizi, Khalid and Jakobi, Tobias and Van Eyk, Jennifer E. and Katus, Hugo and Glembotski, Christopher C. and Doroudgar, Shirin}, title={Proteomic analysis of the cardiac myocyte secretome reveals extracellular protective functions for the ER stress response}, year={2020}, pages={132-144}, language={eng}, issn={1095-8584}, volume={143}, note={Gesehen am 10.12.2020}, journal={Journal of molecular and cellular cardiology}, doi={10.1016/j.yjmcc.2020.04.012}, } @article{UBHD-68428984, author={Doroudgar, Shirin and Sandmann, Christoph and Boileau, Etienne and Malone, Brandon and Riechert, Eva and Górska, Aga and Jakobi, Tobias and Sandmann, Clara and J{\"u}rgensen, Lonny and Kmietczyk, Vivien and Malovrh, Ellen and Burghaus-Zhang, Jana and Rettel, Mandy and Stein, Frank and Younesi, Fereshteh and Friedrich, Ulrike A. and Mauz, Victoria and Backs, Johannes and Kramer, G{\"u}nter and Katus, Hugo and Dieterich, Christoph and V{\"o}lkers, Mirko}, title={Monitoring cell-type-specific gene expression using ribosome profiling in vivo during cardiac hemodynamic stress}, year={2019}, pages={431-448}, language={eng}, issn={1524-4571}, volume={125}, number={4}, note={Gesehen am 11.09.2019}, journal={Circulation research}, doi={10.1161/CIRCRESAHA.119.314817}, } @article{UBHD-68474739, author={Jakobi, Tobias and Uvarovskii, Alexey and Dieterich, Christoph}, title={Circtools - a one-stop software solution for circular RNA research}, year={2018}, pages={2326-2328}, language={eng}, issn={1367-4811 and 1460-2059}, volume={35}, number={13}, note={Gesehen am 13.01.2020}, journal={Bioinformatics}, doi={10.1093/bioinformatics/bty948}, } @article{UBHD-68406902, author={Jakobi, Tobias and Dieterich, Christoph}, title={Computational approaches for circular RNA analysis}, year={2019}, pages={14 S.}, language={eng}, issn={1757-7012}, volume={10(2019}, note={Gesehen am 10.07.2019}, journal={Wiley interdisciplinary reviews}, doi={10.1002/wrna.1528}, } @article{UBHD-68647366, author={Jakobi, Tobias and Siede, Dominik and Eschenbach, Jessica and Heum{\"u}ller, Andreas W. and Busch, Martin and Nietsch, Rouven and Meder, Benjamin and Most, Patrick and Dimmeler, Stefanie and Backs, Johannes and Katus, Hugo and Dieterich, Christoph}, title={Deep characterization of circular RNAs from human cardiovascular cell models and cardiac tissue}, year={2020}, pages={25 S.}, language={eng}, issn={2073-4409}, volume={9(2020}, note={Gesehen am 12.10.2020}, journal={Cells}, doi={10.3390/cells9071616}, } @incollection{UBHD-68564344, author={Jakobi, Tobias and Dieterich, Christoph}, title={Deep computational circular RNA analytics from RNA-seq data}, year={2018}, pages={9-25}, language={eng}, isbn={978-1-4939-7562-4}, note={Gesehen am 15.04.2020}, booktitle={Circular RNAs}, editor={Dieterich, Christoph and Papantōnēs, Akēs}, doi={10.1007/978-1-4939-7562-4_2}, } @article{UBHD-68341772, author={Jakobi, Tobias and Dieterich, Christoph}, title={Profiling and validation of the circular RNA repertoire in adult murine hearts}, year={2016}, pages={216-223}, language={eng}, issn={2210-3244}, volume={14}, number={4}, note={Gesehen am 18.12.2018}, journal={Genomics, proteomics & bioinformatics}, doi={10.1016/j.gpb.2016.02.003}, } @article{UBHD-68938265, author={Jakobi, Tobias and Groß, Julia and Cyganek, Lukas and Doroudgar, Shirin}, title={Transcriptional effects of candidate COVID-19 treatments on cardiac myocytes}, year={2022}, pages={1-13}, language={eng}, issn={2297-055X}, volume={9}, number={Artikel-ID 844441}, note={ This article is part of the Research Topic "What do we know about COVID-19 implications for cardiovascular disease?" ; Gesehen am 06.07.2022}, journal={Frontiers in Cardiovascular Medicine}, doi={10.3389/fcvm.2022.844441}, } @article{UBHD-68657347, author={Kapoor, Utkarsh and Jakobi, Tobias and Dieterich, Christoph}, title={ADAR-deficiency perturbs the global splicing landscape in mouse tissues}, year={2020}, pages={1107-1118}, language={eng}, issn={1549-5469}, volume={30}, number={8}, note={Gesehen am 04.11.2020}, journal={Genome research}, doi={10.1101/gr.256933.119}, } @article{UBHD-68586688, author={Langenk{\"a}mper, Daniel and Jakobi, Tobias and Feld, Dustin and Jelonek, Lukas and Goesmann, Alexander and Nattkemper, Tim W.}, title={Comparison of acceleration techniques for selected low-level bioinformatics operations}, year={2016}, pages={1-12}, language={eng}, issn={1664-8021}, volume={7}, note={Gesehen am 15.06.2020}, journal={Frontiers in genetics}, doi={10.3389/fgene.2016.00005}, } @article{UBHD-69261166, author={Sandmann, Christoph and Aghajani, Marjan and Alcock, Cecily D. and Blackwood, Erik A. and Sandmann, Clara and Herzog, Nicole and Groß, Julia and Plate, Lars and Wiseman, R. Luke and Kaufman, Randal J. and Katus, Hugo and Jakobi, Tobias and V{\"o}lkers, Mirko and Glembotski, Christopher C. and Doroudgar, Shirin}, title={ATF6 protects against protein misfolding during cardiac hypertrophy}, year={2024}, pages={12-24}, language={eng}, issn={1095-8584}, volume={189(2024) vom: Apr.}, note={Gesehen am 10.10.2024}, journal={Journal of molecular and cellular cardiology}, doi={10.1016/j.yjmcc.2024.02.001}, } @article{UBHD-69271652, author={Sandmann, Christoph and Serafin, Adrian and Schwerdt, Ole Momme and Fischer, Johannes and Sicklinger, Florian and Younesi, Fereshteh and Byrne, Nikole J. and Meyer, S{\"o}ren and Malovrh, Ellen and Sandmann, Clara and J{\"u}rgensen, Lonny and Kamuf-Schenk, Verena and Stroh, Claudia and L{\"o}wenthal, Zoe and Finke, Daniel and Boileau, Etienne and Beisaw, Arica and Bugger, Heiko and Rettel, Mandy and Stein, Frank and Katus, Hugo and Jakobi, Tobias and Frey, Norbert and Leuschner, Florian and V{\"o}lkers, Mirko}, title={Transient inhibition of translation improves cardiac function after ischemia/reperfusion by attenuating the inflammatory response}, year={2024}, pages={1248-1267}, language={eng}, issn={1524-4539}, volume={150}, number={16}, note={Gesehen am 07.11.2024}, journal={Circulation}, doi={10.1161/CIRCULATIONAHA.123.067479}, } @incollection{UBHD-68569959, author={Worpenberg, Lina and Jakobi, Tobias and Dieterich, Christoph}, title={Identification of methylated transcripts using the TRIBE approach}, year={2019}, pages={89-106}, language={eng}, isbn={978-1-4939-8808-2}, note={First online: 12 December 2018 ; Gesehen am 24.04.2020}, booktitle={Epitranscriptomics}, editor={Wajapeyee, Narendra and Gupta, Romi}, doi={10.1007/978-1-4939-8808-2_7}, }