@article{UBHD-68758064, author={Albert, Thomas and Interlandi, Marta and Sill, Martin and Graf, Monika and Moreno, Natalia and Menck, Kerstin and Rohlmann, Astrid and Melcher, Viktoria and Korbanka, Sonja and Meyer zu H{\"o}rste, Gerd and Lautwein, Tobias and Fr{\"u}hwald, Michael C and Krebs, Christian F and Holdhof, D{\"o}rthe and Schoof, Melanie and Bleckmann, Annalen and Missler, Markus and Dugas, Martin and Sch{\"u}ller, Ulrich and J{\"a}ger, Natalie and Pfister, Stefan and Kerl, Kornelius}, title={An extracellular vesicle-related gene expression signature identifies high-risk patients in medulloblastoma}, year={2021}, pages={586-598}, language={eng}, issn={1523-5866}, volume={23}, number={4 vom: Apr.}, note={Advance access date 11 November 2020 ; Gesehen am 09.07.2021}, journal={Neuro-Oncology}, doi={10.1093/neuonc/noaa254}, } @article{UBHD-68736692, author={Alexandrov, Ludmil and Eils, Roland and Hutter, Barbara and J{\"a}ger, Natalie and Jones, David T. W. and Kool, Marcel and Northcott, Paul A. and Schlesner, Matthias and Lichter, Peter and Pfister, Stefan}, title={Corrigendum}, subtitle={Signatures of mutational processes in human cancer}, year={2013}, pages={258-258}, language={eng}, issn={1476-4687}, volume={502}, number={7470}, note={Gesehen am 11.05.2021}, journal={Nature}, doi={10.1038/nature12666}, } @article{UBHD-68736684, author={Alexandrov, Ludmil and Eils, Roland and Hutter, Barbara and J{\"a}ger, Natalie and Jones, David T. W. and Kool, Marcel and Northcott, Paul A. and Schlesner, Matthias and Lichter, Peter and Pfister, Stefan}, title={Signatures of mutational processes in human cancer}, year={2013}, pages={415-421}, language={eng}, issn={1476-4687}, volume={500}, number={7463}, note={Gesehen am 11.05.2021}, journal={Nature}, doi={10.1038/nature12477}, } @article{UBHD-68924084, author={Beck, Pengbo and Selle, Barbara and Madenach, Lukas and Jones, David T. W. and Vokuhl, Christian and Gopisetty, Apurva and Nabbi, Arash and Brecht, Ines B. and Ebinger, Martin and Wegert, Jenny and Graf, Norbert and Gessler, Manfred and Pfister, Stefan and J{\"a}ger, Natalie}, title={The genomic landscape of pediatric renal cell carcinomas}, year={2022}, pages={1-24}, language={eng}, issn={2589-0042}, volume={25}, note={Gesehen am 31.05.2022}, journal={iScience}, doi={10.1016/j.isci.2022.104167}, } @article{UBHD-68564574, author={Begemann, Matthias and Waszak, Sebastian M. and Robinson, Giles W. and J{\"a}ger, Natalie and Sharma, Tanvi and Knopp, Cordula and Kraft, Florian and Moser, Olga and Mynarek, Martin and Guerrini-Rousseau, Lea and Brugieres, Laurence and Varlet, Pascale and Pietsch, Torsten and Bowers, Daniel C. and Chintagumpala, Murali and Sahm, Felix and Korbel, Jan Oliver and Rutkowski, Stefan and Eggermann, Thomas and Gajjar, Amar and Northcott, Paul and Elbracht, Miriam and Pfister, Stefan and Kontny, Udo and Kurth, Ingo}, title={Germline GPR161 mutations predispose to pediatric medulloblastoma}, year={2019}, pages={43-50}, language={eng}, issn={1527-7755}, volume={38}, number={1}, note={Gesehen am 15.04.2020}, journal={Journal of clinical oncology}, doi={10.1200/JCO.19.00577}, } @article{UBHD-68957627, author={Catanzaro, Giuseppina and Besharat, Zein Mersini and Carai, Andrea and J{\"a}ger, Natalie and Splendiani, Elena and Colin, Carole and Po, Agnese and Chiacchiarini, Martina and Citarella, Anna and Gianno, Francesca and Cacchione, Antonella and Miele, Evelina and Diomedi Camassei, Francesca and Gessi, Marco and Massimi, Luca and Locatelli, Franco and Jones, David T. W. and Figarella-Branger, Dominique and Pfister, Stefan and Mastronuzzi, Angela and Giangaspero, Felice and Ferretti, Elisabetta}, title={MiR-1248}, subtitle={a new prognostic biomarker able to identify supratentorial hemispheric pediatric low-grade gliomas patients associated with progression}, year={2022}, pages={1-17}, language={eng}, issn={2050-7771}, volume={10}, number={Artikel-ID 44}, note={Gesehen am 26.08.2022}, journal={Biomarker Research}, doi={10.1186/s40364-022-00389-x}, } @article{UBHD-68803891, author={Daub, Joséphine and Amini, Saman and Kersjes, Denise J. E. and Ma, Xiaotu and J{\"a}ger, Natalie and Zhang, Jinghui and Pfister, Stefan and Holstege, Frank Charles Patrick and Kemmeren, Patrick}, title={A systematic analysis of genetic interactions and their underlying biology in childhood cancer}, year={2021}, pages={1-12}, language={eng}, issn={2399-3642}, volume={4}, number={Artikel-ID 1139}, note={Gesehen am 22.11.2021}, journal={Communications biology}, doi={10.1038/s42003-021-02647-4}, } @article{UBHD-68746998, author={Ecker, Jonas and Thatikonda, Venu and Sigismondo, Gianluca and Selt, Florian and Valinciute, Gintvile and Oehme, Ina and M{\"u}ller, Carina and Buhl, Juliane and Ridinger, Johannes and Usta, Diren and Qin, Nan and Tilburg, Cornelis M. van and Herold-Mende, Christel and Remke, Marc and Sahm, Felix and Westermann, Frank and Kool, Marcel and Wechsler-Reya, Robert J. and Chavez, Lukas and Krijgsveld, Jeroen and J{\"a}ger, Natalie and Pfister, Stefan and Witt, Olaf and Milde, Till}, title={Reduced chromatin binding of MYC is a key effect of HDAC inhibition in MYC amplified medulloblastoma}, year={2021}, pages={226-239}, language={eng}, issn={1523-5866}, volume={23}, number={2 vom: Feb.}, note={Gesehen am 10.06.2021 ; First published: 21 August 2020}, journal={Neuro-Oncology}, doi={10.1093/neuonc/noaa191}, } @article{UBHD-69114482, author={Funke, Viktoria and Walter, Carolin and Melcher, Viktoria and Wei, Lanying and Sandmann, Sarah and Hotfilder, Marc and Varghese, Julian and J{\"a}ger, Natalie and Kool, Marcel and Jones, David T. W. and Pfister, Stefan and Milde, Till and Mynarek, Martin and Rutkowski, Stefan and Seggewiss, Jochen and Jeising, Daniela and de Faria, Flavia W. and Marquardt, Thorsten and Albert, Thomas K. and Sch{\"u}ller, Ulrich and Kerl, Kornelius}, title={Group-specific cellular metabolism in Medulloblastoma}, year={2023}, pages={1-16}, language={eng}, issn={1479-5876}, volume={21}, number={Artikel-ID 363}, note={Gesehen am 21.11.2023}, journal={Journal of translational medicine}, doi={10.1186/s12967-023-04211-6}, } @article{UBHD-68693928, author={Haag, Daniel and Mack, Norman and Benites Goncalves da Silva, Patricia and Statz, Britta and Clark, Jessica and Tanabe, Koji and Sharma, Tanvi and J{\"a}ger, Natalie and Jones, David T. W. and Kawauchi, Daisuke and Wernig, Marius and Pfister, Stefan}, title={H3.3-K27M drives neural stem cell-specific gliomagenesis in a human iPSC-derived model}, year={2021}, pages={407-422.e13}, language={eng}, issn={1878-3686}, volume={39}, number={3}, note={Gesehen am 05.02.2021}, journal={Cancer cell}, doi={10.1016/j.ccell.2021.01.005}, } @article{UBHD-69295603, author={Heipertz, Anna-Elisa and Pajtler, Kristian Wilfried and Pfaff, Elke and Schramm, Kathrin and Blattner-Johnson, Mirjam and Milde, Till and Jones, Barbara Christine and Zuliani, Cecilia and Hutter, Caroline and Lohi, Olli and Kattamis, Antonis and Dachowska-Kalwak, Iwona and Nilsson, Anna and Gerber, Nicolas U. and Langenberg, Karin and Goemans, Bianca F. and Zwaan, C. Michel and Molenaar, Jan J. and J{\"a}ger, Natalie and Dirksen, Uta and Witt, Ruth and Pfister, Stefan and Jones, David T. W. and Kopp-Schneider, Annette and Witt, Olaf and Tilburg, Cornelis M. van}, title={Outcome of children and adolescents with relapsed/refractory/progressive malignancies treated with molecularly informed targeted drugs in the pediatric precision oncology registry INFORM}, year={2023}, pages={1-12}, language={eng}, issn={2473-4284}, note={Gesehen am 29.01.2025}, journal={JCO precision oncology}, doi={10.1200/PO.23.00015}, } @book{UBHD-67672583, author={J{\"a}ger, Natalie}, title={Computational analysis of cancer genome sequencing data}, subtitle={the genetic landscape of pediatric brain tumors and X-chromosome hypermutation}, year={2014}, pages={XI, 131 S.}, language={eng}, note={Zsfassung in dt. Sprache}, school={Heidelberg, Univ., Diss., 2014}, library={UB [Signatur: 2014 U 864]}, } @article{UBHD-67486480, author={J{\"a}ger, Natalie and Mallm, Jan-Philipp and Korshunov, Andrey and Witt, Hendrik and Rippe, Karsten and Pfister, Stefan and Eils, Roland}, title={Hypermutation of the inactive X chromosome is a frequent event in cancer}, year={2013}, pages={1-15}, language={eng}, issn={1097-4172}, volume={155}, note={Gesehen am 22.10.2013}, journal={Cell}, doi={10.1016/j.cell.2013.09.042}, } @article{UBHD-68453111, author={Johann, Pascal-David and J{\"a}ger, Natalie and Pfister, Stefan and Sill, Martin}, title={RF_Purify}, subtitle={a novel tool for comprehensive analysis of tumor-purity in methylation array data based on random forest regression}, year={2019}, pages={9 S.}, language={eng}, issn={1471-2105}, volume={20(2019) Artikel-Nummer 428}, number={9 Seiten}, note={Gesehen am 11.11.2019}, journal={BMC bioinformatics}, doi={10.1186/s12859-019-3014-z}, } @article{UBHD-68573696, author={Jones, David T. W. and J{\"a}ger, Natalie and Kool, Marcel and Zichner, Thomas and Hutter, Barbara and Sultan, Marc and Cho, Yoon-Jae and Pugh, Trevor and Hovestadt, Volker and St{\"u}tz, Adrian M. and Rausch, Tobias and Warnatz, Hans-J{\"o}rg and Ryzhova, Marina and Bender, Sebastian and Sturm, Dominik and Pleier, Sabrina Valesca and Şeker-Cin, Huriye and Pfaff, Elke and Sieber, Laura and Wittmann, Andrea and Remke, Marc and Witt, Hendrik and Hutter, Sonja and Tzaridis, Theophilos-Dimitrios and Weischenfeldt, Joachim and Raeder, Benjamin and Avci, Meryem and Amstislavskiy, Vyacheslav and Zapatka, Marc and Weber, Ursula D. and Wang, Qi and Lasitschka, B{\"a}rbel and Bartholom{\"a}, Cynthia C. and Schmidt, Manfred and Kalle, Christof von and Ast, Volker and Lawerenz, Christian and Eils, J{\"u}rgen and Kabbe, Rolf and Benes, Vladimir and Sluis, Peter van and Koster, Jan and Volckmann, Richard and Shih, David and Betts, Matthew J. and Russell, Robert B. and Coco, Simona and Paolo Tonini, Gian and Sch{\"u}ller, Ulrich and Hans, Volkmar and Graf, Norbert and Kim, Yoo-Jin and Monoranu, Camelia and Roggendorf, Wolfgang and Unterberg, Andreas and Herold-Mende, Christel and Milde, Till and Kulozik, Andreas and Deimling, Andreas von and Witt, Olaf and Maass, Eberhard and R{\"o}ssler, Jochen and Ebinger, Martin and Schuhmann, Martin U. and Fr{\"u}hwald, Michael and Hasselblatt, Martin and Jabado, Nada and Rutkowski, Stefan and Bueren, André von and Williamson, Dan and Clifford, Steven C. and McCabe, Martin G. and Peter Collins, V. and Wolf, Stephan and Wiemann, Stefan and Lehrach, Hans and Brors, Benedikt and Scheurlen, Wolfram and Felsberg, J{\"o}rg and Reifenberger, Guido and Northcott, Paul A. and Taylor, Michael D. and Meyerson, Matthew and Pomeroy, Scott L. and Yaspo, Marie-Laure and Korbel, Jan Oliver and Korshunov, Andrey and Eils, Roland and Pfister, Stefan and Lichter, Peter}, title={Dissecting the genomic complexity underlying medulloblastoma}, year={2012}, pages={100-105}, language={eng}, issn={0028-0836}, volume={488}, number={7409 vom: 20. Juni}, journal={Nature}, } @article{UBHD-68296998, author={Jones, David T. W. and J{\"a}ger, Natalie and Kool, Marcel and Zichner, Thomas and Hutter, Barbara and Sultan, Marc and Cho, Yoon-Jae and Pugh, Trevor and Hovestadt, Volker and St{\"u}tz, Adrian M. and Rausch, Tobias and Warnatz, Hans-J{\"o}rg and Ryzhova, Marina and Bender, Sebastian and Sturm, Dominik and Pleier, Sabrina Valesca and Şeker-Cin, Huriye and Pfaff, Elke and Sieber, Laura and Wittmann, Andrea and Remke, Marc and Witt, Hendrik and Hutter, Sonja and Tzaridis, Theophilos-Dimitrios and Weischenfeldt, Joachim and Zapatka, Marc and Bartholom{\"a}, Cynthia C. and Schmidt, Manfred and Kalle, Christof von and Ast, Volker and Lawerenz, Christian and Eils, J{\"u}rgen and Betts, Matthew J. and Russell, Robert B. and Roggendorf, Wolfgang and Unterberg, Andreas and Herold-Mende, Christel and Milde, Till and Kulozik, Andreas and Deimling, Andreas von and Witt, Olaf and Rutkowski, Stefan and Bueren, André von and Brors, Benedikt and Korbel, Jan Oliver and Korshunov, Andrey and Eils, Roland and Pfister, Stefan and Lichter, Peter}, title={Dissecting the genomic complexity underlying medulloblastoma}, year={2012}, pages={100-105}, language={eng}, issn={1476-4687}, volume={488}, number={7409}, note={Gesehen am 20.08.2018}, journal={Nature}, doi={10.1038/nature11284}, } @article{UBHD-68485493, author={Jones, David T. W. and Banito, Ana and Gr{\"u}newald, Thomas G. P. and Haber, Michelle and J{\"a}ger, Natalie and Kool, Marcel and Milde, Till and Molenaar, Jan J. and Nabbi, Arash and Pugh, Trevor and Schleiermacher, Gudrun and Smith, Malcolm A. and Westermann, Frank and Pfister, Stefan}, title={Molecular characteristics and therapeutic vulnerabilities across paediatric solid tumours}, year={2019}, pages={420-438}, language={eng}, issn={1474-1768}, volume={19}, number={8}, note={Gesehen am 06.02.2020}, journal={Nature reviews}, doi={10.1038/s41568-019-0169-x}, } @article{UBHD-68945300, author={Keller, Kaylee M. and Krausert, Sonja and Gopisetty, Apurva and Luedtke, Dan and Koster, Jan and Schubert, Nil A. and Rodríguez, Ana and van Hooff, Sander R. and Stichel, Damian and Dolman, M. Emmy M. and Vassal, Gilles and Pfister, Stefan and Caron, Hubert N. and Stancato, Louis F. and Molenaar, Jan J. and J{\"a}ger, Natalie and Kool, Marcel}, title={Target actionability review}, subtitle={a systematic evaluation of replication stress as a therapeutic target for paediatric solid malignancies}, year={2022}, pages={107-117}, language={eng}, issn={1879-0852}, volume={162(2022) vom: Feb.}, note={First published: 25 December 2021 ; Gesehen am 21.07.2022}, journal={European journal of cancer}, doi={10.1016/j.ejca.2021.11.030}, } @article{UBHD-68639644, author={Mack, Stephen C. and J{\"a}ger, Natalie and Jones, David T. W. and Sill, Martin and Stark, Sebastian and Şeker-Cin, Huriye and Johann, Pascal-David and Bender, Silke and Milde, Till and Kulozik, Andreas and Deimling, Andreas von and Witt, Olaf and Kool, Marcel and Korbel, Jan Oliver and Eils, Roland and Lichter, Peter and Pfister, Stefan}, title={Epigenomic alterations define lethal CIMP-positive ependymomas of infancy}, year={2014}, pages={445-453}, language={eng}, issn={1476-4687}, volume={506}, number={7489}, note={Gesehen am 23.09.2020}, journal={Nature}, doi={10.1038/nature13108}, } @article{UBHD-68639788, author={Mynarek, Martin and Hoff, Katja von and Pietsch, Torsten and Ottensmeier, Holger and Warmuth-Metz, Monika and Bison, Brigitte and Pfister, Stefan and Korshunov, Andrey and Sharma, Tanvi and J{\"a}ger, Natalie and Ryzhova, Marina and Zheludkova, Olga and Golanov, Andrey and Rushing, Elisabeth Jane and Hasselblatt, Martin and Koch, Arend Wolfgang and Sch{\"u}ller, Ulrich and Deimling, Andreas von and Sahm, Felix and Sill, Martin and Riemenschneider, Markus Johannes and Dohmen, Hildegard and Sommer, Clemens and Staszewski, Ori and Mawrin, Christian and Schittenhelm, Jens Florian and Br{\"u}ck, Wolfgang and Filipski, Katharina Johanna and Hartmann, Christian and Meinhardt, Matthias and Pietschmann, Klaus and Haberler, Christine and Slavc, Irene and Gerber, Nicolas U. and Grotzer, Michael and Benesch, Martin and Schlegel, Paul-Gerhardt and Deinlein, Frank and Bueren, André von and Juhnke, Bj{\"o}rn-Ole and Obrecht, Denise and Fleischhack, Gudrun and Kwiecien, Robert and Faldum, Andreas and Kortmann, Rolf-Dieter and Kool, Marcel and Rutkowski, Stefan}, title={Nonmetastatic medulloblastoma of early childhood}, subtitle={results from the prospective clinical trial HIT-2000 and an extended validation cohort}, year={2020}, pages={2028-2040}, language={eng}, issn={1527-7755}, volume={38}, number={18}, note={Gesehen am 23.09.2020}, journal={Journal of clinical oncology}, doi={10.1200/JCO.19.03057}, } @article{UBHD-69151862, author={Okonechnikov, Konstantin and Camg{\"o}z, Aylin and Chapman, Owen and Wani, Sameena and Park, Donglim Esther and H{\"u}bner, Jens-Martin and Chakraborty, Abhijit and Pagadala, Meghana and Bump, Rosalind and Chandran, Sahaana and Kraft, Katerina and Acuna-Hidalgo, Rocio and Reid, Derek and Sikkink, Kristin and Mauermann, Monika and Juarez, Edwin F. and Jenseit, Anne and Robinson, James T. and Pajtler, Kristian Wilfried and Milde, Till and J{\"a}ger, Natalie and Fiesel, Petra and Morgan, Ling and Sridhar, Sunita and Coufal, Nicole G. and Levy, Michael and Malicki, Denise and Hobbs, Charlotte and Kingsmore, Stephen and Nahas, Shareef and Snuderl, Matija and Crawford, John and Wechsler-Reya, Robert J. and Davidson, Tom Belle and Cotter, Jennifer and Michaiel, George and Fleischhack, Gudrun and Mundlos, Stefan and Schmitt, Anthony and Carter, Hannah and Michealraj, Kulandaimanuvel Antony and Kumar, Sachin A. and Taylor, Michael D. and Rich, Jeremy and Buchholz, Frank and Mesirov, Jill P. and Pfister, Stefan and Ay, Ferhat and Dixon, Jesse R. and Kool, Marcel and Chavez, Lukas}, title={3D genome mapping identifies subgroup-specific chromosome conformations and tumor-dependency genes in ependymoma}, year={2023}, pages={1-16}, language={eng}, issn={2041-1723}, volume={14}, number={Artikel-ID 2300}, note={Online ver{\"o}ffentlicht: 21. April 2023 ; Gesehen am 12.12.2023}, journal={Nature Communications}, doi={10.1038/s41467-023-38044-0}, } @article{UBHD-69142675, author={Okonechnikov, Konstantin and Joshi, Piyush and Sepp, Mari and Leiss, Kevin and Sarropoulos, Ioannis and Murat, Florent and Sill, Martin and Beck, Pengbo and Chan, Kenneth Chun-Ho and Korshunov, Andrey and Sahm, Felix and Deng, Maximilian and Sturm, Dominik and DeSisto, John and Donson, Andrew M and Foreman, Nicholas K and Green, Adam L and Robinson, Giles and Orr, Brent A and Gao, Qingsong and Darrow, Emily and Hadley, Jennifer L and Northcott, Paul A and Gojo, Johannes and Kawauchi, Daisuke and Hovestadt, Volker and Filbin, Mariella G and Deimling, Andreas von and Zuckermann, Marc and Pajtler, Kristian Wilfried and Kool, Marcel and Jones, David T. W. and J{\"a}ger, Natalie and Kutscher, Lena M and Kaessmann, Henrik and Pfister, Stefan}, title={Mapping pediatric brain tumors to their origins in the developing cerebellum}, year={2023}, pages={1895-1909}, language={eng}, issn={1523-5866}, volume={25}, number={10 vom: Okt.}, note={Online ver{\"o}ffentlicht: 03. August 2023 ; Gesehen am 14.11.2023}, journal={Neuro-Oncology}, doi={10.1093/neuonc/noad124}, } @article{UBHD-69344141, author={Okonechnikov, Konstantin and Joshi, Piyush and K{\"o}rber, Verena and Rademacher, Anne and Bortolomeazzi, Michele and Mallm, Jan-Philipp and Vaillant, Jan and da Silva, Patricia Benites Goncalves and Statz, Britta and Sepp, Mari and Sarropoulos, Ioannis and Yamada, Tetsuya and Wittmann, Andrea and Schramm, Kathrin and Blattner-Johnson, Mirjam and Fiesel, Petra and Jones, Barbara Christine and J{\"a}ger, Natalie and Milde, Till and Pajtler, Kristian Wilfried and Tilburg, Cornelis M. van and Witt, Olaf and Bochennek, Konrad and Weber, Katharina Johanna and Nonnenmacher, Lisa and Reimann, Christian and Ghasemi, David R. and Sch{\"u}ller, Ulrich and Mynarek, Martin and Rutkowski, Stefan and Jones, David T. W. and Korshunov, Andrey and Rippe, Karsten and Westermann, Frank and Thongjuea, Supat and H{\"o}fer, Thomas and Kaessmann, Henrik and Kutscher, Lena and Pfister, Stefan}, title={Oncogene aberrations drive medulloblastoma progression, not initiation}, year={2025}, pages={34 S.}, language={eng}, issn={1476-4687}, note={Gesehen am 13.05.2025}, journal={Nature}, doi={10.1038/s41586-025-08973-5}, } @article{UBHD-68862212, author={Reuss, David and Piro, Rosario M. and Jones, David T. W. and Simon, Matthias and Ketter, Ralf and Kool, Marcel and Becker, Albert and Sahm, Felix and Pusch, Stefan and Meyer, Jochen and Hagenlocher, Christian and Schweizer, Leonille and Capper, David and Vollmuth, Philipp and Mucha, Jana and K{\"o}lsche, Christian and J{\"a}ger, Natalie and Santarius, Thomas and Tarpey, Patrick S. and Stephens, Philip J. and Futreal, P. Andrew and Wellenreuther, Ruth and Kraus, J{\"u}rgen and Lenartz, Doris and Herold-Mende, Christel and Hartmann, Christian and Mawrin, Christian and Giese, Nathalia and Eils, Roland and Collins, V. Peter and K{\"o}nig, Rainer and Wiestler, Otmar D. and Pfister, Stefan and Deimling, Andreas von}, title={Secretory meningiomas are defined by combined KLF4 K409Q and TRAF7 mutations}, year={2013}, pages={351-358}, language={eng}, issn={1432-0533}, volume={125}, number={3}, note={Gesehen am 04.01.2022}, journal={Acta neuropathologica}, doi={10.1007/s00401-013-1093-x}, } @article{UBHD-68864217, author={Rieber, Nora and Zapatka, Marc and Lasitschka, B{\"a}rbel and Jones, David T. W. and Northcott, Paul and Hutter, Barbara and J{\"a}ger, Natalie and Kool, Marcel and Taylor, Michael and Lichter, Peter and Pfister, Stefan and Wolf, Stephan and Brors, Benedikt and Eils, Roland}, title={Coverage bias and sensitivity of variant calling for four whole-genome sequencing technologies}, year={2013}, pages={1-11}, language={eng}, issn={1932-6203}, volume={8}, note={Gesehen am 11.01.2022}, journal={PLOS ONE}, doi={10.1371/journal.pone.0066621}, } @article{UBHD-68480819, author={Sharma, Tanvi and Schwalbe, Edward C. and Williamson, Daniel and Sill, Martin and Hovestadt, Volker and Mynarek, Martin and Rutkowski, Stefan and Robinson, Giles W. and Gajjar, Amar and Cavalli, Florence M. G. and Ramaswamy, Vijay and Taylor, Michael D. and Lindsey, Janet C. and Hill, Rebecca M. and J{\"a}ger, Natalie and Korshunov, Andrey and Hicks, Debbie and Bailey, Simon and Kool, Marcel and Chavez, Lukas and Northcott, Paul A. and Pfister, Stefan and Clifford, Steven C.}, title={Second-generation molecular subgrouping of medulloblastoma}, subtitle={an international meta-analysis of Group 3 and Group 4 subtypes}, year={2019}, pages={309-326}, language={eng}, issn={1432-0533}, volume={138}, number={2}, note={Gesehen am 27.01.2020}, journal={Acta neuropathologica}, doi={10.1007/s00401-019-02020-0}, } @article{UBHD-69053691, author={Sturm, Dominik and Capper, David and Andreiuolo, Felipe and Gessi, Marco and K{\"o}lsche, Christian and Reinhardt, Annekathrin and Sievers, Philipp and Wefers, Annika K. and Ebrahimi, Azadeh and Suwala, Abigail Kora and Gielen, Gerrit H. and Sill, Martin and Schrimpf, Daniel and Stichel, Damian and Hovestadt, Volker and Daenekas, Bjarne and Rode, Agata and Hamelmann, Stefan and Previti, A. Christopher and J{\"a}ger, Natalie and Buchhalter, Ivo and Blattner-Johnson, Mirjam and Jones, Barbara Christine and Warmuth-Metz, Monika and Bison, Brigitte and Grund, Kerstin and Sutter, Christian and Hirsch, Steffen and Dikow, Nicola and Witt, Olaf and Deimling, Andreas von and M{\"u}ller, Hermann L. and Pietsch, Torsten and Sahm, Felix and Pfister, Stefan and Jones, David T. W.}, title={Multiomic neuropathology improves diagnostic accuracy in pediatric neuro-oncology}, year={2023}, pages={917-926}, language={eng}, issn={1546-170X}, volume={29}, number={4}, note={Gesehen am 21.03.2023}, journal={Nature medicine}, doi={10.1038/s41591-023-02255-1}, } @article{UBHD-69062341, author={Thatikonda, Venu and Islam, S. M. Ashiqul and Autry, Robert J. and Jones, Barbara Christine and Gr{\"o}bner, Susanne N. and Warsow, Gregor and Hutter, Barbara and H{\"u}bschmann, Daniel and Fr{\"o}hling, Stefan and Kool, Marcel and Blattner-Johnson, Mirjam and Jones, David T. W. and Alexandrov, Ludmil B. and Pfister, Stefan and J{\"a}ger, Natalie}, title={Comprehensive analysis of mutational signatures reveals distinct patterns and molecular processes across 27 pediatric cancers}, year={2023}, pages={276-289}, language={eng}, issn={2662-1347}, volume={4}, number={2 vom: Jan.}, note={Gesehen am 04.04.2023}, journal={Nature cancer}, doi={10.1038/s43018-022-00509-4}, } @article{UBHD-68747001, author={Tilburg, Cornelis M. van and Witt, Ruth and Heiss, Melanie and Pajtler, Kristian Wilfried and Plass, Christoph and Poschke, Isabel and Platten, Michael and Harting, Inga and Sedlaczek, Oliver and Freitag, Angelika and Meyrath, David and Taylor, Lenka A. and Balasubramanian, Gnana Prakash and J{\"a}ger, Natalie and Pfaff, Elke and Jones, Barbara Christine and Milde, Till and Pfister, Stefan and Jones, David T. W. and Kopp-Schneider, Annette and Witt, Olaf}, title={INFORM2 NivEnt}, subtitle={the first trial of the INFORM2 biomarker driven phase I/II trial series : the combination of nivolumab and entinostat in children and adolescents with refractory high-risk malignancies}, year={2020}, pages={1-12}, language={eng}, issn={1471-2407}, volume={20(2020) vom: Juni}, number={Artikel-ID 523}, note={Gesehen am 10.06.2021}, journal={BMC cancer}, doi={10.1186/s12885-020-07008-8}, } @article{UBHD-68768470, author={Tilburg, Cornelis M. van and Pfaff, Elke and Pajtler, Kristian Wilfried and Langenberg, Karin and Fiesel, Petra and Jones, Barbara Christine and Balasubramanian, Gnana Prakash and Stark, Sebastian and Johann, Pascal-David and Blattner-Johnson, Mirjam and Schramm, Kathrin and Dikow, Nicola and Hirsch, Steffen and Sutter, Christian and Grund, Kerstin and Stackelberg, Arend von and Kulozik, Andreas and Lissat, Andrej and Borkhardt, Arndt and Meisel, Roland and Reinhardt, Dirk and Klusmann, Jan-Henning and Fleischhack, Gudrun and Tippelt, Stephan and Schweinitz, Dietrich von and Schmid, Irene and Kramm, Christof M. and Bueren, André von and Calaminus, Gabriele and Vorwerk, Peter and Graf, Norbert and Westermann, Frank and Fischer, Matthias and Eggert, Angelika and Burkhardt, Birgit and W{\"o}ßmann, Wilhelm and Nathrath, Michaela and Hecker-Nolting, Stefanie and Fr{\"u}hwald, Michael and Schneider, Dominik T. and Brecht, Ines B. and Ketteler, Petra and Fulda, Simone and Koscielniak, Ewa and Meister, Michael and Scheer, Monika and Hettmer, Simone and Schwab, Matthias and Tremmel, Roman and Øra, Ingrid and Hutter, Caroline and Gerber, Nicolas U. and Lohi, Olli and Kazanowska, Bernarda and Kattamis, Antonis and Filippidou, Maria and Goemans, Bianca and Zwaan, C. Michel and Milde, Till and J{\"a}ger, Natalie and Wolf, Stephan and Reuss, David and Sahm, Felix and Deimling, Andreas von and Dirksen, Uta and Freitag, Angelika and Witt, Ruth and Lichter, Peter and Kopp-Schneider, Annette and Jones, David T. W. and Molenaar, Jan J. and Capper, David and Pfister, Stefan and Witt, Olaf}, title={The pediatric precision oncology INFORM registry}, subtitle={clinical outcome and benefit for patients with very high-evidence targets}, year={2021}, pages={2764-2779}, language={eng}, issn={2159-8290}, volume={11}, number={11}, note={Gesehen am 30.07.2021}, journal={Cancer discovery}, doi={10.1158/2159-8290.CD-21-0094}, } @article{UBHD-68984076, author={Tsai, Jessica W. and Cejas, Paloma and Wang, Dayle K. and Patel, Smruti and Wu, David W. and Arounleut, Phonepasong and Wei, Xin and Zhou, Ningxuan and Syamala, Sudeepa and Dubois, Frank P.B. and Crane, Alexander and Pelton, Kristine and Vogelzang, Jayne and Sousa, Cecilia and Baguette, Audrey and Chen, Xiaolong and Condurat, Alexandra L. and Dixon-Clarke, Sarah E. and Zhou, Kevin N. and Lu, Sophie D. and Gonzalez, Elizabeth M. and Chacon, Madison S. and Digiacomo, Jeromy J. and Kumbhani, Rushil and Novikov, Dana and Hunter, J'Ya and Tsoli, Maria and Ziegler, David S. and Dirksen, Uta and J{\"a}ger, Natalie and Balasubramanian, Gnana Prakash and Kramm, Christof M. and Nathrath, Michaela and Bielack, Stefan and Baker, Suzanne J. and Zhang, Jinghui and McFarland, James M. and Getz, Gad and Aguet, François and Jabado, Nada and Witt, Olaf and Pfister, Stefan and Ligon, Keith L. and Hovestadt, Volker and Kleinman, Claudia L. and Long, Henry and Jones, David T. W. and Bandopadhayay, Pratiti and Phoenix, Timothy N.}, title={FOXR2 Is an epigenetically regulated pan-cancer oncogene that activates ETS transcriptional circuits}, year={2022}, pages={2980-3001}, language={eng}, issn={1538-7445}, volume={82}, number={17}, note={Gesehen am 10.11.2022}, journal={Cancer research}, doi={10.1158/0008-5472.CAN-22-0671}, } @article{UBHD-69068981, author={Ulrich, Elias and Pfister, Stefan and J{\"a}ger, Natalie}, title={Revana}, subtitle={a comprehensive tool for regulatory variant analysis and visualization of cancer genomes}, year={2023}, pages={1-3}, language={eng}, issn={1367-4811}, volume={39}, note={Gesehen am 25.04.2023 ; Published: 28 December 2022}, journal={Bioinformatics}, doi={10.1093/bioinformatics/btac831}, } @article{UBHD-68588486, author={Waszak, Sebastian Martin and Buchhalter, Ivo and Kerssemakers, Jules and J{\"a}ger, Natalie and Sharma, Tanvi and Rausch, Tobias and Kool, Marcel and Sturm, Dominik and Jones, David T. W. and Milde, Till and Witt, Olaf and Korshunov, Andrey and Lichter, Peter and Korbel, Jan Oliver and Pfister, Stefan}, title={Germline elongator mutations in Sonic Hedgehog medulloblastoma}, year={2020}, pages={396-401}, language={eng}, issn={1476-4687}, volume={580}, number={7803}, note={Gesehen am 18.06.2020}, journal={Nature}, doi={10.1038/s41586-020-2164-5}, } @article{UBHD-68794519, author={Weischenfeldt, Joachim and Simon, Ronald and Feuerbach, Lars and Schlangen, Karin and Weichenhan, Dieter and Minner, Sarah and Wuttig, Daniela and Warnatz, Hans-J{\"o}rg and Stehr, Henning and Rausch, Tobias and J{\"a}ger, Natalie and Gu, Lei and Bogatyrëva, Olga and St{\"u}tz, Adrian M. and Claus, Rainer and Eils, J{\"u}rgen and Eils, Roland and Gerh{\"a}user, Clarissa and Huang, Po-Hsien and Hutter, Barbara and Kabbe, Rolf and Lawerenz, Christian and Radomski, Sylwester and Bartholomae, Cynthia C. and F{\"a}lth Savitski, Maria and Gade, Stephan and Schmidt, Manfred and Amschler, Nina and Haß, Thomas and Galal, Rami and Gjoni, Jovisa and Kuner, Ruprecht and Baer, Constance and Masser, Sawinee and Kalle, Christof von and Zichner, Thomas and Benes, Vladimir and Raeder, Benjamin and Mader, Malte and Amstislavskiy, Vyacheslav and Avci, Meryem and Lehrach, Hans and Parkhomchuk, Dmitri and Sultan, Marc and Burkhardt, Lia and Graefen, Markus and Huland, Hartwig and Kluth, Martina and Krohn, Antje and Sirma, H{\"u}seyin and Stumm, Laura and Steurer, Stefan and Grupp, Katharina and S{\"u}ltmann, Holger and Sauter, Guido and Plass, Christoph and Brors, Benedikt and Yaspo, Marie-Laure and Korbel, Jan Oliver and Schlomm, Thorsten}, title={Integrative genomic analyses reveal an androgen-driven somatic alteration landscape in early-onset prostate cancer}, year={2013}, pages={159-170}, language={eng}, issn={1878-3686}, volume={23}, number={2}, note={Gesehen am 28.10.2021}, journal={Cancer cell}, doi={10.1016/j.ccr.2013.01.002}, }