@article{UBHD-69215360, author={Albrecht, Thomas and Rossberg, Annik and Albrecht, Jana Dorothea and Nicolay, Jan Peter and Straub, Beate Katharina and Gerber, Tiemo Sven and Albrecht, Michael and Brinkmann, Fritz and Charbel, Alphonse and Schwab, Constantin and Schreck, Johannes and Brobeil, Alexander and Flechtenmacher, Christa and Winterfeld, Moritz von and K{\"o}hler, Bruno Christian and Springfeld, Christoph and Mehrabi, Arianeb and Singer, Stephan and Vogel, Monika Nadja and Neumann, Olaf and Stenzinger, Albrecht and Schirmacher, Peter and Weis, Cleo-Aron Thias and R{\"o}ssler, Stephanie and Kather, Jakob Nikolas and Goeppert, Benjamin}, title={Deep learning-enabled diagnosis of liver adenocarcinoma}, subtitle={original research}, year={2023}, pages={1262-1275}, language={eng}, issn={1528-0012}, volume={165}, number={5 vom: Nov.}, note={Online verf{\"u}gbar: 9. August 2023, Artikelversion: 19. Oktober 2023 ; Gesehen am 16.05.2024}, journal={Gastroenterology}, doi={10.1053/j.gastro.2023.07.026}, } @article{UBHD-68734707, author={Bund, Timo and Nikitina, Ekaterina and Chakraborty, Deblina and Ernst, Claudia and Gunst, Karin and Boneva, Boyana and Tessmer, Claudia and Volk, Nadine and Brobeil, Alexander and Weber, Achim and Heikenw{\"a}lder, Mathias and Zur Hausen, Harald and Villiers, Ethel-Michele de}, title={Analysis of chronic inflammatory lesions of the colon for BMMF Rep antigen expression and CD68 macrophage interactions}, year={2021}, pages={1-9}, language={eng}, issn={1091-6490}, volume={118}, note={Gesehen am 06.05.2021}, journal={Proceedings of the National Academy of Sciences of the United States of America}, doi={10.1073/pnas.2025830118}, } @article{UBHD-68569611, author={Desch, Ann-Kathrin and Hartung, Kristin and Botzen, Ante and Brobeil, Alexander and Rummel, Mathias and Kurch, Lars and Georgi, Thomas Walter and Jox, Theresa and Bielack, Stefan and Burdach, Stefan and Classen, Carl Friedrich and Claviez, Alexander and Debatin, Klaus-Michael and Ebinger, Martin and Eggert, Angelika and Faber, J{\"o}rg and Flotho, Christian and Fr{\"u}hwald, Michael and Graf, Norbert and Jorch, Norbert and Kontny, Udo and Kramm, Christof and Kulozik, Andreas and K{\"u}hr, Joachim and Sykora, Karl-Walter and Metzler, Markus and M{\"u}ller, Hermann L. and Nathrath, Michaela and N{\"u}ßlein, Thomas Georg and Paulussen, Michael and Pekrun, Arnulf and Reinhardt, Dirk and Reinhard, Harald and R{\"o}ssig, Claudia and Sauerbrey, Axel and Schlegel, Paul-Gerhardt and Schneider, Dominik T. and Scheurlen, Wolfram and Schweigerer, Lothar and Simon, Thorsten and Suttorp, Meinolf and Vorwerk, Peter and Schmitz, Roland and Kluge, Regine and Mauz-K{\"o}rholz, Christine and K{\"o}rholz, Dieter and Gattenl{\"o}hner, Stefan and Br{\"a}uninger, Andreas}, title={Genotyping circulating tumor DNA of pediatric Hodgkin lymphoma}, year={2020}, pages={151-166}, language={eng}, issn={1476-5551}, volume={34}, number={1}, note={Gesehen am 23.04.2020 ; Published online: 20 August 2019}, journal={Leukemia}, doi={10.1038/s41375-019-0541-6}, } @article{UBHD-69253288, author={El Nahhas, Omar S. M. and Loeffler, Chiara M. L. and Carrero, Zunamys I. and van Treeck, Marko and Kolbinger, Fiona and Hewitt, Katherine J. and Muti, Hannah S. and Graziani, Mara and Zeng, Qinghe and Calderaro, Julien and Ortiz-Br{\"u}chle, Nadina and Yuan, Tanwei and Hoffmeister, Michael and Brenner, Hermann and Brobeil, Alexander and Reis-Filho, Jorge S. and Kather, Jakob Nikolas}, title={Regression-based Deep-Learning predicts molecular biomarkers from pathology slides}, year={2024}, pages={1-13}, language={eng}, issn={2041-1723}, volume={15}, number={Artikel-ID 1253}, note={Gesehen am 13.09.2024}, journal={Nature Communications}, doi={10.1038/s41467-024-45589-1}, } @article{UBHD-69212506, author={Gerber, Tiemo Sven and Ridder, Dirk A. and Goeppert, Benjamin and Brobeil, Alexander and Stenzel, Philipp and Zimmer, Stefanie and J{\"a}kel, J{\"o}rg and Metzig, Marie Oliver and Schwab, Roxana and Martin, Steve Z. and Kiss, András and Bergmann, Frank and Schirmacher, Peter and Galle, Peter R. and Lang, Hauke and Roth, Wilfried and Straub, Beate K.}, title={N-cadherin}, subtitle={a diagnostic marker to help discriminate primary liver carcinomas from extrahepatic carcinomas}, year={2024}, pages={1857-1868}, language={eng}, issn={1097-0215}, volume={154}, number={10 vom: Mai}, note={Ver{\"o}ffentlicht: 11. Januar 2024 ; Gesehen am 10.05.2024}, journal={International journal of cancer}, doi={10.1002/ijc.34836}, } @article{UBHD-69276193, author={Gustav, Marco and Reitsam, Nic Gabriel and Carrero, Zunamys I. and Loeffler, Chiara M. L. and van Treeck, Marko and Yuan, Tanwei and West, Nicholas P. and Quirke, Philip and Brinker, Titus Josef and Brenner, Hermann and Favre, Loëtitia and M{\"a}rkl, Bruno and Stenzinger, Albrecht and Brobeil, Alexander and Hoffmeister, Michael and Calderaro, Julien and Pujals, Anaïs and Kather, Jakob Nikolas}, title={Deep learning for dual detection of microsatellite instability and POLE mutations in colorectal cancer histopathology}, year={2024}, pages={1-11}, language={eng}, issn={2397-768X}, volume={8}, note={Gesehen am 25.11.2024}, journal={npj precision oncology}, doi={10.1038/s41698-024-00592-z}, } @article{UBHD-69213504, author={Jiang, Xiaofeng and Hoffmeister, Michael and Brenner, Hermann and Muti, Hannah Sophie and Yuan, Tanwei and Foersch, Sebastian and West, Nicholas P and Brobeil, Alexander and Jonnagaddala, Jitendra and Hawkins, Nicholas and Ward, Robyn L and Brinker, Titus Josef and Saldanha, Oliver Lester and Ke, Jia and M{\"u}ller, Wolfram and Grabsch, Heike I and Quirke, Philip and Truhn, Daniel and Kather, Jakob Nikolas}, title={End-to-end prognostication in colorectal cancer by deep learning}, subtitle={a retrospective, multicentre study}, year={2024}, pages={e33-e43}, language={eng}, issn={2589-7500}, volume={6}, number={1 vom: Jan.}, note={Online verf{\"u}gbar: 18. Dezember 2023 ; Gesehen am 14.05.2024}, journal={The lancet}, doi={10.1016/S2589-7500(23)00208-X}, } @article{UBHD-69159435, author={John, Lukas and Poos, Alexandra and Brobeil, Alexander and Schinke, Carolina and Huhn, Stefanie and Prokoph, Nina and Lutz, Raphael and Wagner, Barbara and Zangari, Maurizio and Tirier, Stephan Marius and Mallm, Jan-Philipp and Schumacher, Sabrina and Vonficht, Dominik and Solé-Boldo, Llorenç and Quick, Sabine and Steiger, Simon and Przybilla, Moritz Jakob and Bauer, Katharina and Baumann, Anja and Hemmer, Stefan and Rehnitz, Christoph and L{\"u}ckerath, Christian and Sachpekidis, Christos and Mechtersheimer, Gunhild and Haberkorn, Uwe and Dimitrakopoulou-Strauss, Antonia and Reichert, Philipp and Barlogie, Bart and M{\"u}ller-Tidow, Carsten and Goldschmidt, Hartmut and Hillengaß, Jens and Rasche, Leo and Haas, Simon and Van Rhee, Frits and Rippe, Karsten and Raab, Marc-Steffen and Sauer, Sandra and Weinhold, Niels}, title={Resolving the spatial architecture of myeloma and its microenvironment at the single-cell level}, year={2023}, pages={1-17}, language={eng}, issn={2041-1723}, volume={14}, number={Artikel-ID 5011}, note={Gesehen am 09.01.2024}, journal={Nature Communications}, doi={10.1038/s41467-023-40584-4}, } @article{UBHD-68964277, author={Kaufhold-Wedel, Carolin and Hummel, Michael and Brobeil, Alexander and Schirmacher, Peter and Schmitt, Sabrina}, title={Qualit{\"a}tssicherung im Gewebebiobanking}, subtitle={ein {\"U}berblick}, year={2022}, pages={365-371}, language={ger}, issn={2731-7196}, volume={43}, number={5}, note={Gesehen am 14.09.2022}, journal={Die Pathologie}, doi={10.1007/s00292-022-01078-0}, } @article{UBHD-69001323, author={Kehl, Niklas and Kilian, Michael and Michel, Julius and Wagner, Tim R. and Uhrig, Sebastian and Brobeil, Alexander and Sester, Lilli Sophie and Blobner, Sven and Steiger, Simon and Hundemer, Michael and Weinhold, Niels and Rippe, Karsten and Fr{\"o}hling, Stefan and Eichm{\"u}ller, Stefan B. and Bunse, Lukas and M{\"u}ller-Tidow, Carsten and Goldschmidt, Hartmut and Platten, Michael and Raab, Marc-Steffen and Friedrich, Mirco}, title={IgE type multiple myeloma exhibits hypermutated phenotype and tumor reactive T cells}, year={2022}, pages={1-9}, language={eng}, issn={2051-1426}, volume={10}, note={Gesehen am 03.01.2023}, journal={Journal for ImmunoTherapy of Cancer}, doi={10.1136/jitc-2022-005815}, } @article{UBHD-68869770, author={Kiehl, Lennard and Kuntz, Sara and H{\"o}hn, Julia and Jutzi, Tanja and Krieghoff-Henning, Eva and Kather, Jakob Nikolas and Holland-Letz, Tim and Kopp-Schneider, Annette and Chang-Claude, Jenny and Brobeil, Alexander and Kalle, Christof von and Fr{\"o}hling, Stefan and Alwers, Elizabeth and Brenner, Hermann and Hoffmeister, Michael and Brinker, Titus Josef}, title={Deep learning can predict lymph node status directly from histology in colorectal cancer}, year={2021}, pages={464-473}, language={eng}, issn={1879-0852}, volume={157}, note={Gesehen am 22.01.2022}, journal={European journal of cancer}, doi={10.1016/j.ejca.2021.08.039}, } @article{UBHD-69147184, author={K{\"o}hrer, Sebastian and Dittrich, Tobias and Schorb, Martin and Weinhold, Niels and Haberbosch, Isabella and B{\"o}rmel, Mandy and Pajor, Gabor and Goldschmidt, Hartmut and M{\"u}ller-Tidow, Carsten and Raab, Marc-Steffen and John, Lukas and Seckinger, Anja and Brobeil, Alexander and Dreger, Peter and Tornóczky, Tamás and Pajor, László and Hegenbart, Ute and Sch{\"o}nland, Stefan and Schwab, Yannick and Kr{\"a}mer, Alwin}, title={High-throughput electron tomography identifies centriole over-elongation as an early event in plasma cell disorders}, year={2023}, pages={2468-2478}, language={eng}, issn={1476-5551}, volume={37}, number={12}, note={Online ver{\"o}ffentlicht: 11. Oktober 2023 ; Gesehen am 28.11.2023}, journal={Leukemia}, doi={10.1038/s41375-023-02056-y}, } @article{UBHD-69107840, author={Niehues, Jan Moritz and Quirke, Philip and West, Nicholas P. and Grabsch, Heike I. and van Treeck, Marko and Schirris, Yoni and Veldhuizen, Gregory P. and Hutchins, Gordon G. A. and Richman, Susan D. and Foersch, Sebastian and Brinker, Titus Josef and Fukuoka, Junya and Bychkov, Andrey and Uegami, Wataru and Truhn, Daniel and Brenner, Hermann and Brobeil, Alexander and Hoffmeister, Michael and Kather, Jakob Nikolas}, title={Generalizable biomarker prediction from cancer pathology slides with self-supervised deep learning}, subtitle={a retrospective multi-centric study}, year={2023}, pages={1-16}, language={eng}, issn={2666-3791}, volume={4}, note={Online verf{\"u}gbar 22 March 2023, Version des Artikels 18 April 2023 ; Gesehen am 09.08.2023}, journal={Cell reports}, doi={10.1016/j.xcrm.2023.100980}, } @article{UBHD-69233706, author={Nikitina, Ekaterina and Alikhanyan, Kristina and Neßling, Michelle and Richter, Karsten and Kaden, Sylvia and Ernst, Claudia and Seitz, Stefan and Chuprikova, Liubov and H{\"a}fele, Lisa and Gunst, Karin and Rahbari, Nuh Nabi and Birgin, Emrullah and Rasbach, Erik and Rahbari, Mohammad and Brobeil, Alexander and Schenk, Miriam and B{\"u}chler, Markus W. and Villiers, Ethel-Michele de and Bund, Timo and Zur Hausen, Harald}, title={Structural expression of bovine milk and meat factors in tissues of colorectal, lung and pancreatic cancer patients}, subtitle={infectious causes of cancer : short report}, year={2023}, pages={173-182}, language={eng}, issn={1097-0215}, volume={153}, number={1 vom: Juli}, note={Erstmals ver{\"o}ffentlicht: 28. November 2022 ; Gesehen am 15.07.2024}, journal={International journal of cancer}, doi={10.1002/ijc.34374}, } @article{UBHD-69130726, author={Sch{\"u}tz, Sabrina and Solé-Boldo, Llorenç and Lucena Porcel, Carlota and Hoffmann, Jochen and Brobeil, Alexander and Lonsdorf, Anke Susanne and Rodríguez Paredes, Manuel and Lyko, Frank}, title={Functionally distinct cancer-associated fibroblast subpopulations establish a tumor promoting environment in squamous cell carcinoma}, year={2023}, pages={1-14}, language={eng}, issn={2041-1723}, volume={14}, number={Artikel-ID 5413}, note={Ver{\"o}ffentlicht: 05. September 2023 ; Gesehen am 17.10.2023}, journal={Nature Communications}, doi={10.1038/s41467-023-41141-9}, } @article{UBHD-68891586, author={Steinbuß, Georg and Kriegsmann, Mark and Zgorzelski, Christiane and Brobeil, Alexander and Goeppert, Benjamin and Dietrich, Sascha and Mechtersheimer, Gunhild and Kriegsmann, Katharina}, title={Deep learning for the classification of non-hodgkin lymphoma on histopathological images}, year={2021}, pages={1-11}, language={eng}, issn={2072-6694}, volume={13}, note={Gesehen am 04.03.2022}, journal={Cancers}, doi={10.3390/cancers13102419}, } @article{UBHD-69357366, author={Tauch, Saskia and Hey, Joschka and Kast, Bettina and Gengenbacher, Nicolas and Weiß, Lena and Sator-Schmitt, Melanie and Lohr, Sabrina and Brobeil, Alexander and Schirmacher, Peter and Utikal, Jochen and Augustin, Hellmut and Plass, Christoph and Angel, Peter}, title={A unique signature for cancer-associated fibroblasts in melanoma metastases}, year={2025}, pages={1-9}, language={eng}, issn={1755-148X}, volume={38}, note={Online ver{\"o}ffentlicht: 9. Februar 2025 ; Gesehen am 18.06.2025}, journal={Pigment cell & melanoma research}, doi={10.1111/pcmr.70002}, } @article{UBHD-69194137, author={Truhn, Daniel and Tayebi Arasteh, Soroosh and Saldanha, Oliver Lester and M{\"u}ller-Franzes, Gustav and Khader, Firas and Quirke, Philip and West, Nicholas P. and Gray, Richard and Hutchins, Gordon G. A. and James, Jacqueline A. and Loughrey, Maurice B. and Salto-Tellez, Manuel and Brenner, Hermann and Brobeil, Alexander and Yuan, Tanwei and Chang-Claude, Jenny and Hoffmeister, Michael and F{\"o}rsch, Sebastian and Han, Tianyu and Keil, Sebastian and Schulze-Hagen, Maximilian and Isfort, Peter and Bruners, Philipp and Kaissis, Georgios and Kuhl, Christiane and Nebelung, Sven and Kather, Jakob Nikolas}, title={Encrypted federated learning for secure decentralized collaboration in cancer image analysis}, year={2024}, pages={1-12}, language={eng}, issn={1361-8423}, volume={92(2024) vom: Feb.}, number={Artikel-ID 103059}, note={Online verf{\"u}gbar: 7. Dezember 2023, Artikelversion: 16. Dezember 2023 ; Gesehen am 21.03.2024}, journal={Medical image analysis}, doi={10.1016/j.media.2023.103059}, } @article{UBHD-69198299, author={Yuan, Tanwei and Edelmann, Dominic and Kather, Jakob Nikolas and Fan, Ziwen and Tagscherer, Katrin and Roth, Wilfried and Bewerunge-Hudler, Melanie and Brobeil, Alexander and Kloor, Matthias and Bl{\"a}ker, Hendrik and Burwinkel, Barbara and Brenner, Hermann and Hoffmeister, Michael}, title={CpG-biomarkers in tumor tissue and prediction models for the survival of colorectal cancer}, subtitle={A systematic review and external validation study}, year={2024}, pages={1-10}, language={eng}, issn={1879-0461}, volume={193}, number={Artikel-ID 104199}, note={Online verf{\"u}gbar: 11. November 2023 ; Gesehen am 08.04.2024}, journal={Critical reviews in oncology, hematology}, doi={10.1016/j.critrevonc.2023.104199}, } @article{UBHD-69289619, author={Yuan, Tanwei and Wankhede, Durgesh and Edelmann, Dominic and Kather, Jakob Nikolas and Tagscherer, Katrin and Roth, Wilfried and Bewerunge-Hudler, Melanie and Brobeil, Alexander and Kloor, Matthias and Bl{\"a}ker, Hendrik and Brenner, Hermann and Hoffmeister, Michael}, title={Large-scale external validation and meta-analysis of gene methylation biomarkers in tumor tissue for colorectal cancer prognosis}, year={2024}, pages={1-12}, language={eng}, issn={2352-3964}, volume={105(2024) vom: Juli}, number={Artikel-ID 105223}, note={Online verf{\"u}gbar 24 June 2024, Version des Artikels 24 June 2024 ; Gesehen am 13.01.2025}, journal={EBioMedicine}, doi={10.1016/j.ebiom.2024.105223}, }