@article{UBHD-69316217,
  author={An, Jingyu and Kurilov, Roman and Peccerella, Teresa and Bergmann, Frank and Edderkaoui, Mouad and Lim, Adrian and Zhou, Xu and Pf{\"u}tze, Katrin and Schulz, Angela and Wolf, Stephan and Hu, Kai and Springfeld, Christoph and Mughal, Sadaf Shabbir and Zezlina, Lenart and Fortunato, Franco and Beyer, Georg and Mayerle, Julia and Roth, Susanne and Hulkkonen, Johannes and Merz, Daniela and Ei, Shigenori and Mehrabi, Arianeb and Loos, Martin and Saeedi, Mohammed al and Michalski, Christoph and B{\"u}chler, Markus W. and Hackert, Thilo and Brors, Benedikt and Pandol, Stephen J. and Bailey, Peter and Neoptolemos, John P.},
  title={Metavert synergises with standard cytotoxics in human PDAC organoids and is associated with transcriptomic signatures of therapeutic response},
  year={2024},
  pages={1-14},
  language={eng},
  issn={1936-5233},
  volume={49(2024) vom: Nov.},
  number={Artikel-ID 102109},
  note={Online verf{\"u}gbar: 31. August 2024 ; Gesehen am 07.03.2025},
  journal={Translational oncology},
  doi={10.1016/j.tranon.2024.102109},
}
@article{UBHD-68654873,
  author={Antwi, Enoch and Olins, Ada and Teif, Vladimir and Bieg, Matthias and Bauer, Tobias and Gu, Zuguang and Brors, Benedikt and Eils, Roland and Olins, Donald and Ishaque, Naveed},
  title={Whole-genome fingerprint of the DNA methylome during chemically induced differentiation of the human AML cell line HL-60/S4},
  year={2020},
  pages={1-11},
  language={eng},
  issn={2046-6390},
  volume={9},
  note={Gesehen am 28.10.2020},
  journal={Biology open},
  doi={10.1242/bio.044222},
}
@article{UBHD-69068404,
  author={Awwad, Mohamed and Mahmoud, Abdelrahman and Bruns, Heiko and Echchannaoui, Hakim and Kriegsmann, Katharina and Lutz, Raphael and Raab, Marc-Steffen and Bertsch, Uta and Munder, Markus and Jauch, Anna and Weisel, Katja and Maier, Bettina and Weinhold, Niels and Salwender, Hans J{\"u}rgen and Eckstein, Volker and H{\"a}nel, Mathias and Fenk, Roland and D{\"u}rig, Jan and Brors, Benedikt and Benner, Axel and M{\"u}ller-Tidow, Carsten and Goldschmidt, Hartmut and Hundemer, Michael},
  title={Selective elimination of immunosuppressive T cells in patients with multiple myeloma},
  year={2021},
  pages={2602-2615},
  language={eng},
  issn={1476-5551},
  volume={35},
  number={9},
  note={Gesehen am 24.04.2023},
  journal={Leukemia},
  doi={10.1038/s41375-021-01172-x},
  url={https://doi.org/10.1038/s41375-021-01172-x},
  library={UB},
}
@article{UBHD-69124273,
  author={Aybey, Bogac and Zhao, Sheng and Brors, Benedikt and Staub, Eike},
  title={Immune cell type signature discovery and random forest classification for analysis of single cell gene expression datasets},
  year={2023},
  pages={1-14},
  language={eng},
  issn={1664-3224},
  volume={14},
  number={Artikel-ID 1194745},
  note={Gesehen am 25.09.2023},
  journal={Frontiers in immunology},
  doi={10.3389/fimmu.2023.1194745},
  url={https://doi.org/10.3389/fimmu.2023.1194745},
  library={UB},
}
@article{UBHD-68302821,
  author={Ball, Claudia R. and Oppel, Felix and Ehrenberg, Karl Roland and Dubash, Taronish Dorab and Dieter, Sebastian M. and Hoffmann, Christopher M. and Abel, Ulrich and Herbst, Friederike and Koch, Moritz and Werner, Jens and Bergmann, Frank and Schmidt, Manfred and Kalle, Christof von and Scholl, Claudia and Fr{\"o}hling, Stefan and Brors, Benedikt and Weichert, Wilko and Weitz, J{\"u}rgen and Glimm, Hanno},
  title={Succession of transiently active tumor‐initiating cell clones in human pancreatic cancer xenografts},
  year={2017},
  pages={918-932},
  language={eng},
  issn={1757-4684},
  volume={9},
  number={7},
  note={Gesehen am 06.09.2018},
  journal={EMBO molecular medicine},
  doi={10.15252/emmm.201607354},
}
@article{UBHD-68191833,
  author={Bender, Sebastian and Pfaff, Elke and Sturm, Dominik and Jones, Barbara Christine and Tilburg, Cornelis M. van and Milford, David and Heiland, Sabine and Kalle, Christof von and Kulozik, Andreas and Unterberg, Andreas and Witt, Olaf and Deimling, Andreas von and Capper, David and Brors, Benedikt and Herold-Mende, Christel and Korshunov, Andrey and Eils, Roland and Pfister, Stefan},
  title={Recurrent MET fusion genes represent a drug target in pediatric glioblastoma},
  year={2016},
  pages={1314-1322},
  language={eng},
  issn={1546-170X},
  volume={22},
  number={11},
  note={Gesehen am 17.11.2017},
  journal={Nature medicine},
  doi={10.1038/nm.4204},
}
@article{UBHD-69355263,
  author={Bitto, Verena and H{\"o}nscheid, Pia and Besso, María José and Sperling, Christian and Kurth, Ina and Baumann, Michael and Brors, Benedikt},
  title={Enhancing mass spectrometry imaging accessibility using convolutional autoencoders for deriving hypoxia-associated peptides from tumors},
  year={2024},
  pages={1-13},
  language={eng},
  issn={2056-7189},
  volume={10},
  note={Gesehen am 11.06.2025},
  journal={npj Systems biology and applications},
  doi={10.1038/s41540-024-00385-x},
}
@article{UBHD-68965610,
  author={Bogeska, Ruzhica and Mikecin, Ana-Matea and Kaschutnig, Paul Emanuel and Fawaz, Malak and B{\"u}chler-Sch{\"a}ff, Marleen and Le, Duy and Ganuza, Miguel and Vollmer, Angelika and Paffenholz, Stella V. and Asada, Noboru and Rodríguez Correa, Esther and Frauhammer, Felix and Buettner, Florian and Ball, Melanie and Knoch, Julia and St{\"a}ble, Sina and Walter, Dagmar and Petri, Amelie and Carreño-Gonzalez, Martha J. and Wagner, Vinona and Brors, Benedikt and Haas, Simon and Lipka, Daniel and Essers, Marieke and Weru, Vivienn and Holland-Letz, Tim and Mallm, Jan-Philipp and Rippe, Karsten and Kr{\"a}mer, Stephan and Schlesner, Matthias and McKinney Freeman, Shannon and Florian, Maria Carolina and King, Katherine Y. and Frenette, Paul S. and Rieger, Michael A. and Milsom, Michael},
  title={Inflammatory exposure drives long-lived impairment of hematopoietic stem cell self-renewal activity and accelerated aging},
  year={2022},
  pages={1273-1284.e8},
  language={eng},
  issn={1875-9777},
  volume={29},
  number={8},
  journal={Cell stem cell},
  doi={10.1016/j.stem.2022.06.012},
}
@article{UBHD-69149731,
  author={Braband, Kathrin Luise and Nedwed, Annekathrin Silvia and Helbich, Sara Salome and Simon, Malte and Beumer, Niklas and Brors, Benedikt and Marini, Federico and Delacher, Michael},
  title={Using single-cell chromatin accessibility sequencing to characterize CD4+ T cells from murine tissues},
  year={2023},
  pages={1-33},
  language={eng},
  issn={1664-3224},
  volume={14},
  note={Gesehen am 05.12.2023},
  journal={Frontiers in immunology},
  doi={10.3389/fimmu.2023.1232511},
}
@article{UBHD-68965888,
  author={Brocks, David and Assenov, Yassen and Minner, Sarah and Bogatyrëva, Olga and Simon, Ronald and Koop, Christina and Oakes, Christopher C. and Zucknick, Manuela and Lipka, Daniel and Weischenfeldt, Joachim and Feuerbach, Lars and Cowper-Sal-lari, Richard and Lupien, Mathieu and Brors, Benedikt and Korbel, Jan Oliver and Schlomm, Thorsten and Tanay, Amos and Sauter, Guido and Gerh{\"a}user, Clarissa and Plass, Christoph},
  title={Intratumor DNA methylation heterogeneity reflects clonal evolution in aggressive prostate cancer},
  year={2014},
  pages={798-806},
  language={eng},
  issn={2211-1247},
  volume={8},
  journal={Cell reports},
  doi={10.1016/j.celrep.2014.06.053},
}
@book{UBHD-68422989,
  author={Brors, Benedikt and H{\"o}fer, Thomas and Westermann, Frank},
  organization={Deutsches Krebsforschungszentrum},
  title={Forschungskonsortien zur Systemmedizin e:Med-Initiative: Systemmedizin beim Neuroblastom},
  subtitle={SYSMED-NB : Teilprojekte: A1: TP-Leiter: Prof. Benedikt Brors, DKFZ; A3: TP Leiter: Matthias Selbach Max Delbr{\"u}ck Center f{\"u}r Molekulare Medizin, TP Partner: PD Dr. Frank Westermann, DKFZ; B1: TP-Leiter: PD Dr. Frank Westermann, Prof. Dr. Thomas H{\"o}fer, DKFZ; B4: TP Leiter: Hedwig E. Deubzer Charité, Berlin; TP-Partner: Prof. Dr. Thomas H{\"o}fer, DKFZ : Schlussbericht {\"u}ber den Projektverlauf vom 01.08.2014 bis 31.07.2017},
  publisher={[Deutsches Krebsforschungszentrum]},
  address={[Heidelberg]},
  year={2018},
  pages={19 Bl{\"a}tter, 2 ungez{\"a}hlte Bl{\"a}tter},
  language={ger},
  note={F{\"o}rderkennzeichen BMBF 01ZX1307B. - Verbund-Nummer 01152875 ; Unterschiede zwischen dem gedruckten Dokument und der elektronischen Ressource k{\"o}nnen nicht ausgeschlossen werden},
  keywords={Neuroblastom / Kind / Systemmedizin / Molekulare Medizin},
}
@book{UBHD-68422993,
  author={Brors, Benedikt and H{\"o}fer, Thomas and Westermann, Frank},
  organization={Deutsches Krebsforschungszentrum},
  title={Forschungskonsortien zur Systemmedizin e:Med-Initiative: Systemmedizin beim Neuroblastom},
  subtitle={SYSMED-NB : Teilprojekte: A1: TP-Leiter: Prof. Benedikt Brors, DKFZ; A3: TP Leiter: Matthias Selbach, Max Delbr{\"u}ck Center f{\"u}r Molekulare Medizin, TP Partner: PD Dr. Frank Westermann, DKFZ; B1: TP-Leiter: PD Dr. Frank Westermann, Prof. Dr. Thomas H{\"o}fer, DKFZ; B4: TP Leiter: Hedwig E. Deubzer Charité, Berlin; TP-Partner: Prof. Dr. Thomas H{\"o}fer, DKFZ : Schlussbericht {\"u}ber den Projektverlauf vom 01.08.2014 bis 31.07.2017},
  publisher={[Deutsches Krebsforschungszentrum]},
  address={[Heidelberg]},
  year={2018},
  pages={1 Online-Ressource (21 Seiten, 395,82 KB)},
  language={ger},
  note={F{\"o}rderkennzeichen BMBF 01ZX1307B. - Verbund-Nummer 01152875 ; Unterschiede zwischen dem gedruckten Dokument und der elektronischen Ressource k{\"o}nnen nicht ausgeschlossen werden},
  doi={10.2314/GBV:1022268872},
  keywords={Neuroblastom / Kind / Systemmedizin / Molekulare Medizin},
}
@book{UBHD-68631115,
  author={Brors, Benedikt and Herten, Dirk-Peter and Kallenberger, Stefan M.},
  organization={Universit{\"a}t Heidelberg},
  title={LungSys - Systembiologie von Lungenkrebs: dynamische Eigenschaften fr{\"u}her Metastasierung und therapeutische Optionen},
  subtitle={Teilprojekte WP1, WP2 und WP4 : Schlussbericht : 01.02.2012-31.07.2015},
  publisher={Ruprecht-Karls-Universit{\"a}t Heidelberg},
  address={Heidelberg},
  year={2016},
  pages={11 Bl{\"a}tter},
  language={ger},
  note={F{\"o}rderkennzeichen BMBF 0316042C. - Verbund-Nummer 01099805 ; Unterschiede zwischen dem gedruckten Dokument und der elektronischen Ressource k{\"o}nnen nicht ausgeschlossen werden},
  keywords={Lungenkrebs / Nicht-kleinzelliges Bronchialkarzinom / Tumorwachstum / Metastase / Signaltransduktion / Systembiologie},
}
@book{UBHD-68631117,
  author={Brors, Benedikt and Herten, Dirk-Peter and Kallenberger, Stefan M.},
  organization={Universit{\"a}t Heidelberg},
  title={LungSys - Systembiologie von Lungenkrebs: dynamische Eigenschaften fr{\"u}her Metastasierung und therapeutische Optionen},
  subtitle={Teilprojekte WP1, WP2 und WP4 : Schlussbericht : 01.02.2012-31.07.2015},
  publisher={Ruprecht-Karls-Universit{\"a}t Heidelberg},
  address={Heidelberg},
  year={2016},
  pages={1 Online-Ressource (11 Seiten, 128,01 KB)},
  language={ger},
  note={F{\"o}rderkennzeichen BMBF 0316042C. - Verbund-Nummer 01099805 ; Unterschiede zwischen dem gedruckten Dokument und der elektronischen Ressource k{\"o}nnen nicht ausgeschlossen werden},
  doi={10.2314/GBV:880039086},
  keywords={Lungenkrebs / Nicht-kleinzelliges Bronchialkarzinom / Tumorwachstum / Metastase / Signaltransduktion / Systembiologie},
}
@article{UBHD-68298919,
  author={Budczies, Jan and Mechtersheimer, Gunhild and Mughal, Sadaf Shabbir and Chudasama, Priya and Endris, Volker and Lier, Amelie and Lasitschka, Felix and Penzel, Roland and Brors, Benedikt and Gr{\"o}schel, Stefan and Glimm, Hanno and Schirmacher, Peter and Renner, Marcus and Fr{\"o}hling, Stefan and Stenzinger, Albrecht},
  title={PD-L1 (CD274) copy number gain, expression, and immune cell infiltration as candidate predictors for response to immune checkpoint inhibitors in soft-tissue sarcoma},
  year={2017},
  language={eng},
  issn={2162-402X},
  volume={6(2017},
  note={Gesehen am 24.08.2018},
  journal={OncoImmunology},
  doi={10.1080/2162402X.2017.1279777},
}
@article{UBHD-68430763,
  author={Busch, Elena and Heining, Christoph and Weber, Tim and Lasitschka, Felix and Schemmer, Peter and Schirmacher, Peter and Weiss, Karl Heinz and Glimm, Hanno and Brors, Benedikt and Weichert, Wilko and J{\"a}ger, Dirk and Fr{\"o}hling, Stefan and Springfeld, Christoph},
  title={Dauerhafte Remission unter dualer HER2-Blockade mit Trastuzumab und Pertuzumab bei metastasiertem Gallenblasenkarzinom},
  year={2016},
  pages={426-430},
  language={ger and eng},
  issn={1439-7803},
  volume={54},
  number={05},
  note={Gesehen am 17.09.2019},
  journal={Zeitschrift f{\"u}r Gastroenterologie},
  doi={10.1055/s-0042-103498},
}
@article{UBHD-69079552,
  author={Busch, Elena and Kreutzfeldt, Simon and Agaimy, Abbas and Mechtersheimer, Gunhild and Horak, Peter and Brors, Benedikt and Hutter, Barbara and Fr{\"o}hlich, Martina and Uhrig, Sebastian and Mayer, Philipp and Schr{\"o}ck, Evelin and Stenzinger, Albrecht and Glimm, Hanno and J{\"a}ger, Dirk and Springfeld, Christoph and Fr{\"o}hling, Stefan and Zsch{\"a}bitz, Stefanie},
  title={Successful BRAF/MEK inhibition in a patient with BRAFV600E-mutated extrapancreatic acinar cell carcinoma},
  year={2020},
  pages={1-10},
  language={eng},
  issn={2373-2873},
  volume={6},
  note={Im Titel ist der Ausdruck "V600E" hochgestellt ; Gesehen am 25.05.2023},
  journal={Cold Spring Harbor molecular case studies},
  doi={10.1101/mcs.a005553},
}
@article{UBHD-68616811,
  author={Cabezas Wallscheid, Nina and Klimmeck, Daniel and Hansson, Jenny and Lipka, Daniel and Reyes, Alejandro and Wang, Qi and Weichenhan, Dieter and Lier, Amelie and Paleske, Lisa von and Renders, Simon and W{\"u}nsche, Peer and Zeisberger, Petra and Brocks, David and Gu, Lei and Herrmann, Carl and Haas, Simon and Essers, Marieke and Brors, Benedikt and Eils, Roland and Huber, Wolfgang and Milsom, Michael and Plass, Christoph and Krijgsveld, Jeroen and Trumpp, Andreas},
  title={Identification of regulatory networks in HSCs and their immediate progeny via integrated proteome, transcriptome, and DNA methylome analysis},
  year={2014},
  pages={507-522},
  language={eng},
  issn={1875-9777},
  volume={15},
  number={4},
  note={Gesehen am 14.07.2020},
  journal={Cell stem cell},
  doi={10.1016/j.stem.2014.07.005},
}
@article{UBHD-68208677,
  author={Chudasama, Priya and Herbst, Sophie and Kasper, Bernd and Heilig, Christoph E. and Egerer, Gerlinde and Kalle, Christof von and Eils, Roland and Stenzinger, Albrecht and Glimm, Hanno and Gr{\"o}schel, Stefan and Omlor, Georg and Lehner, Burkhard and Schimmack, Simon and Ulrich, Alexis and Mechtersheimer, Gunhild and Rippe, Karsten and Brors, Benedikt and Renner, Marcus and Hohenberger, Peter and Scholl, Claudia and Fr{\"o}hling, Stefan},
  title={Integrative genomic and transcriptomic analysis of leiomyosarcoma},
  year={2018},
  pages={15 S.},
  language={eng},
  issn={2041-1723},
  volume={9(2018) Artikel-Nummer 144},
  number={15 Seiten},
  note={Gesehen am 11.01.2018},
  journal={Nature Communications},
  doi={10.1038/s41467-017-02602-0},
}
@article{UBHD-68402695,
  author={Correia, Margareta and Stojanovic, Ana and Bauer, Katharina and Juraeva, Dilafruz and Tykocinski, Lars-Oliver and Lorenz, Hanns-Martin and Brors, Benedikt and Cerwenka, Adelheid},
  title={Distinct human circulating NKp30+FcεRIγ+CD8+ T cell population exhibiting high natural killer-like antitumor potential},
  year={2018},
  pages={10 S.},
  language={eng},
  issn={1091-6490},
  volume={115 (2018},
  note={Published online June 12, 2018 ; Gesehen am 28.06.2019},
  journal={Proceedings of the National Academy of Sciences of the United States of America},
  doi={10.1073/pnas.1720564115},
}
@article{UBHD-69192836,
  author={Delacher, Michael and Schmidleithner, Lisa Maria and Simon, Malte and St{\"u}ve, Philipp Florenz and Sanderink, Lieke and Hotz-Wagenblatt, Agnes and Wuttke, Marina and Schambeck, Kathrin and Ruhland, Brigitte and Hofmann, Veronika and Bittner, Sebastian and Ritter, Uwe and Pant, Asmita and Helbich, Sara Salome and Voss, Morten and Lemmermann, Niels Arne Wilhelm and Bessiri-Schake, Lisa and Bohn, Toszka and Eigenberger, Andreas and Menevse, Ayse Nur and Gebhard, Claudia and Strieder, Nicholas and Abken, Hinrich and Rehli, Michael and H{\"u}hn, Jochen and Beckhove, Philipp and Hehlgans, Thomas and Junger, Henrik Horst Gerhard and Geissler, Edward K. and Prantl, Lukas and Werner, Jens-Martin and Schmidl, Christian and Brors, Benedikt and Imbusch, Charles and Feuerer, Markus},
  title={The effector program of human CD8 T cells supports tissue remodeling},
  year={2024},
  pages={1-22},
  language={eng},
  issn={1540-9538},
  volume={221},
  note={Gesehen am 18.03.2024},
  journal={Journal of experimental medicine},
  doi={10.1084/jem.20230488},
}
@article{UBHD-68315333,
  author={Delacher, Michael and Imbusch, Charles and Weichenhan, Dieter and Breiling, Achim and Hotz-Wagenblatt, Agnes and Tr{\"a}ger, Ulrike and Herrmann, Carl and Brors, Benedikt and Plass, Christoph and Feuerer, Markus},
  title={Genome-wide DNA-methylation landscape defines specialization of regulatory T cells in tissues},
  year={2017},
  pages={1160-1172},
  language={eng},
  issn={1529-2916},
  volume={18},
  number={10},
  note={A corrigendum to this article was published on 16 November 2017 ; Gesehen am 15.10.2018},
  journal={Nature immunology},
  doi={10.1038/ni.3799},
}
@article{UBHD-68559828,
  author={Delacher, Michael and Hotz-Wagenblatt, Agnes and Mallm, Jan-Philipp and Bauer, Katharina and Brors, Benedikt and Feuerer, Markus},
  title={Precursors for nonlymphoid-tissue treg cells reside in secondary lymphoid organs and are programmed by the transcription factor BATF},
  year={2020},
  pages={295-312.e1-e11},
  language={eng},
  issn={1097-4180},
  volume={52},
  number={2},
  note={Gesehen am 31.03.2020},
  journal={Immunity},
  doi={10.1016/j.immuni.2019.12.002},
}
@article{UBHD-68741525,
  author={Delacher, Michael and Simon, Malte and Sanderink, Lieke and Hotz-Wagenblatt, Agnes and Wuttke, Marina and Schambeck, Kathrin and Schmidleithner, Lisa and Bittner, Sebastian and Pant, Asmita and Ritter, Uwe and Hehlgans, Thomas and Riegel, Dania and Schneider, Verena and Groeber-Becker, Florian Kai and Eigenberger, Andreas and Gebhard, Claudia and Strieder, Nicholas and Fischer, Alexander and Rehli, Michael and Hoffmann, Petra and Edinger, Matthias and Strowig, Till and Huehn, Jochen and Schmidl, Christian and Werner, Jens M. and Prantl, Lukas and Brors, Benedikt and Imbusch, Charles and Feuerer, Markus},
  title={Single-cell chromatin accessibility landscape identifies tissue repair program in human regulatory T cells},
  year={2021},
  pages={36 S.},
  language={eng},
  issn={1097-4180},
  volume={54(2021},
  note={Gesehen am 27.05.2021},
  journal={Immunity},
  doi={10.1016/j.immuni.2021.03.007},
}
@article{UBHD-68320075,
  author={Dieter, Sebastian M. and Heining, Christoph and H{\"u}bschmann, Daniel and Hutter, Barbara and Ehrenberg, Karl Roland and Fr{\"o}hlich, Martina and Scholl, Claudia and Mavratzas, Athanasios and Jung, Carla Sabine and Gr{\"o}schel, Stefan and Kalle, Christof von and Eils, Roland and Brors, Benedikt and Penzel, Roland and Kriegsmann, Mark and Reuss, David and Schirmacher, Peter and Stenzinger, Albrecht and Federspil, Philippe A. and Weichert, Wilko and Glimm, Hanno and Fr{\"o}hling, Stefan},
  title={Mutant KIT as imatinib-sensitive target in metastatic sinonasal carcinoma},
  year={2017},
  pages={142-148},
  language={eng},
  issn={1569-8041},
  volume={28},
  number={1},
  note={Published online 29 September 2016 ; Gesehen am 23.10.2018},
  journal={Annals of oncology},
  doi={10.1093/annonc/mdw446},
}
@article{UBHD-68302355,
  author={Dieter, Sebastian M. and Gießler, Klara Monika and Kriegsmann, Mark and Dubash, Taronish Dorab and Siegl, Christine and Weber, Sarah and Heger, Ulrike and Gao, Jianpeng and Hartinger, Eva-Maria and Oppel, Felix and Hoffmann, Christopher M. and Ha, Nati and Brors, Benedikt and Lasitschka, Felix and Ulrich, Alexis and Strobel, Oliver and Schmidt, Manfred and Kalle, Christof von and Schneider, Martin and Weichert, Wilko and Glimm, Hanno and Ball, Claudia R.},
  title={Patient-derived xenografts of gastrointestinal cancers are susceptible to rapid and delayed B-lymphoproliferation},
  year={2017},
  pages={1356-1363},
  language={eng},
  issn={1097-0215},
  volume={140},
  number={6},
  note={First published: 09 December 2016 ; Gesehen am 05.09.2018},
  journal={International journal of cancer},
  doi={10.1002/ijc.30561},
}
@article{UBHD-68649467,
  author={Espinet, Elisa and Gu, Zuguang and Imbusch, Charles and Giese, Nathalia and B{\"u}scher, Magdalena and Safavi, Mariam and Weisenburger, Silke and Klein, Corinna and Vogel, Vanessa and Falcone, Mattia and Insua-Rodríguez, Jacob and Reitberger, Manuel and Thiel, Vera and Kossi, Steffi O. and Muckenhuber, Alexander and Sarai, Karnjit and Lee, Alex YL and Backx, Elyne and Zarei, Soheila and Gaida, Matthias and Rodríguez Paredes, Manuel and Donato, Elisa and Yen, Hsi-Yu and Eils, Roland and Schlesner, Matthias and Pfarr, Nicole and Hackert, Thilo and Plass, Christoph and Brors, Benedikt and Steiger, Katja and Weichenhan, Dieter and Arda, H. Efsun and Rooman, Ilse and Kopp, Janel L. and Strobel, Oliver and Weichert, Wilko and Sprick, Martin and Trumpp, Andreas},
  title={Aggressive PDACs show hypomethylation of repetitive elements and the execution of an intrinsic IFN program linked to a ductal cell-of-origin},
  year={2021},
  pages={638-659},
  language={eng},
  issn={2159-8290},
  volume={11},
  number={3},
  note={Published first October 15, 2020 ; Gesehen am 16.10.2020},
  journal={Cancer discovery},
  doi={10.1158/2159-8290.CD-20-1202},
}
@book{UBHD-68423132,
  author={Feuerbach, Lars and Sieverling, Lina Katharine and Deeg, Katharina and Hutter, Barbara and Buchhalter, Ivo and Mughal, Sadaf Shabbir and Chudasama, Priya and Glimm, Hanno and Scholl, Claudia and Lichter, Peter and Fr{\"o}hling, Stefan and Pfister, Stefan and Jones, David T. W. and Rippe, Karsten and Brors, Benedikt},
  title={TelomereHunter},
  subtitle={in silico estimation of telomere content and composition from cancer genomes},
  publisher={Universit{\"a}tsbibliothek Heidelberg},
  address={Heidelberg},
  year={2019},
  pages={1 Online-Ressource (11 Seiten)},
  language={eng},
  note={In: BMC Bioinformatics, 20 (2019), Nr. 272. pp. 1-11. ISSN 1471-2105},
  url={https://nbn-resolving.org/urn:nbn:de:bsz:16-heidok-265107},
  library={UB},
}
@article{UBHD-68406340,
  author={Feuerbach, Lars and Sieverling, Lina Katharine and Deeg, Katharina and Hutter, Barbara and Buchhalter, Ivo and Mughal, Sadaf Shabbir and Chudasama, Priya and Glimm, Hanno and Scholl, Claudia and Lichter, Peter and Fr{\"o}hling, Stefan and Pfister, Stefan and Jones, David T. W. and Rippe, Karsten and Brors, Benedikt},
  title={TelomereHunter},
  subtitle={in silico estimation of telomere content and composition from cancer genomes},
  year={2019},
  pages={11 S.},
  language={eng},
  issn={1471-2105},
  volume={20(2019) Artikel-Nummer 272},
  number={11 Seiten},
  note={Gesehen am 09.07.2019},
  journal={BMC bioinformatics},
  doi={10.1186/s12859-019-2851-0},
}
@article{UBHD-68915169,
  author={Feuerborn, Alexander and Srivastava, P. K. and K{\"u}ffer, Stefan and Grandy, W. A. and Sijmonsma, T. P. and Gretz, Norbert and Brors, Benedikt and Gr{\"o}ne, Hermann-Josef},
  title={The Forkhead factor FoxQ1 influences epithelial differentiation},
  year={2011},
  pages={710-719},
  language={eng},
  issn={1097-4652},
  volume={226},
  number={3},
  note={First published: 17 August 2010 ; Gesehen am 05.05.2022},
  journal={Journal of cellular physiology},
  doi={10.1002/jcp.22385},
}
@article{UBHD-69087626,
  author={Fischer, Matthias and Bauer, Tobias Hartmut and Oberth{\"u}r, Carl André and Hero, B. and Theissen, J. and Ehrich, M. and Spitz, R. and Eils, Roland and Westermann, Frank and Brors, Benedikt and K{\"o}nig, Rainer and Berthold, Frank},
  title={Integrated genomic profiling identifies two distinct molecular subtypes with divergent outcome in neuroblastoma with loss of chromosome 11q},
  year={2010},
  pages={865-875},
  language={eng},
  issn={1476-5594},
  volume={29},
  number={6},
  note={Online ver{\"o}ffentlicht am 9. November 2009 ; Gesehen am 20.06.2023},
  journal={Oncogene},
  doi={10.1038/onc.2009.390},
}
@book{UBHD-68664284,
  author={Winkler, Eva C. and Idler, Irina and Beck, Katja and Brors, Benedikt and Cornelius, Kai and Dikow, Nicola and Fr{\"o}hling, Stefan and Glimm, Hanno and Herpel, Esther and Korbel, Jan Oliver and Lichter, Peter and Richter, Daniela and Schickhardt, Christoph and Tanner, Klaus and Wiemann, Stefan and Fleischer, Henrike},
  organization={Projektgruppe EURAT},
  title={Position paper on the release of raw genomic data to patients and study participants},
  publisher={Marsilius-Kolleg},
  address={Heidelberg},
  year={2020},
  pages={1 Online-Ressource (67 Seiten)},
  language={ger and eng},
  number={ARRAY(0x563b880aed60)},
  series={Forum Marsilius-Kolleg},
  note={Gesehen am 23.11.2020},
  doi={10.11588/fmk.2020.0.76125},
  url={http://dx.doi.org/10.11588/fmk.2020.0.76125},
  library={UB},
}
@book{UBHD-69140233,
  author={Jungkunz, Martin and Cornelius, Kai and Schickhardt, Christoph and Dikow, Nicola and Winkler, Eva C. and Brors, Benedikt and Fr{\"o}hling, Stefan and Greulich-Bode, Karin Maria and Idler, Irina and Lichter, Peter and Milde, Till and Pfister, Stefan and Schaaf, Christian P. and Wiemann, Stefan},
  title={Position paper on the return of additional genetic findings in minors},
  publisher={Marsilius-Kolleg},
  address={Heidelberg},
  year={2023},
  pages={1 Online-Ressource (120 Seiten)},
  language={eng},
  number={ARRAY(0x563b88132df0)},
  series={Forum Marsilius-Kolleg},
  note={Gesehen am 06.11.2023},
  url={https://doi.org/10.11588/fmk.2023.23.100566},
  library={UB},
}
@book{UBHD-69139948,
  author={Jungkunz, Martin and Cornelius, Kai and Schickhardt, Christoph and Dikow, Nicola and Winkler, Eva C. and Brors, Benedikt and Fr{\"o}hling, Stefan and Greulich-Bode, Karin Maria and Idler, Irina and Lichter, Peter and Milde, Till and Pfister, Stefan and Schaaf, Christian P. and Wiemann, Stefan},
  organization={Projektgruppe EURAT},
  title={Stellungnahme zur R{\"u}ckmeldung genetischer Zusatzbefunde Minderj{\"a}hriger},
  publisher={Marsilius-Kolleg},
  address={Heidelberg},
  year={2023},
  pages={1 Online-Ressource (130 Seiten)},
  language={ger},
  number={ARRAY(0x563b880a3038)},
  series={Forum Marsilius-Kolleg},
  note={Gesehen am 06.11.2023},
  doi={10.11588/fmk.2023.23.98739},
  url={https://doi.org/10.11588/fmk.2023.23.98739},
  library={UB},
}
@article{UBHD-68916855,
  author={Frank, Oliver and Brors, Benedikt and Fabarius, Alice and Li, Li and Haak, M. and Merk, S. and Schwindel, U. and Zheng, C. and M{\"u}ller, Martin Christian and Gretz, Norbert and Hehlmann, R{\"u}diger and Hochhaus, Andreas and Seifarth, Wolfgang},
  title={Gene expression signature of primary imatinib-resistant chronic myeloid leukemia patients},
  year={2006},
  pages={1400-1407},
  language={eng},
  issn={1476-5551},
  volume={20},
  number={8},
  note={Gesehen am 10.05.2022},
  journal={Leukemia},
  doi={10.1038/sj.leu.2404270},
}
@article{UBHD-68374139,
  author={Gerh{\"a}user, Clarissa and Feuerbach, Lars and Assenov, Yassen and H{\"u}bschmann, Daniel and Kuryshev, Vladimir and Weichenhan, Dieter and Toth, Reka and Lutsik, Pavlo and Lawerenz, Christian and Eils, Roland and Schlesner, Matthias and Kalle, Christof von and S{\"u}ltmann, Holger and Brors, Benedikt and Plass, Christoph and Korbel, Jan Oliver},
  title={Molecular evolution of early-onset prostate cancer identifies molecular risk markers and clinical trajectories},
  year={2018},
  pages={996-1011.e8},
  language={eng},
  issn={1878-3686},
  volume={34},
  number={6},
  note={Gesehen am 29.03.2019},
  journal={Cancer cell},
  doi={10.1016/j.ccell.2018.10.016},
}
@article{UBHD-68620922,
  author={Gerola, Stefano and Nittka, Stefanie and K{\"a}hler, Georg and Tao, Sha and Brenner, Hermann and Binelli, Giorgio and Eils, Roland and Brors, Benedikt and Neumaier, Michael},
  title={Genetic variants in apoptosis-related genes associated with colorectal hyperplasia},
  year={2014},
  pages={769-778},
  language={eng},
  issn={1098-2264},
  volume={53},
  number={9},
  note={Gesehen am 27.07.2020},
  journal={Genes, chromosomes & cancer},
  doi={10.1002/gcc.22185},
}
@article{UBHD-69065196,
  author={Giesen, Nicola and Paramasivam, Nagarajan and Toprak, Umut and H{\"u}bschmann, Daniel and Xu, Jing and Uhrig, Sebastian and Samur, Mehmet and B{\"a}hr, Stella and Fr{\"o}hlich, Martina and Mughal, Sadaf Shabbir and Mai, Elias K. and Jauch, Anna and M{\"u}ller-Tidow, Carsten and Brors, Benedikt and Munshi, Nikhil C. and Goldschmidt, Hartmut and Weinhold, Niels and Schlesner, Matthias and Raab, Marc-Steffen},
  title={Comprehensive genomic analysis of refractory multiple myeloma reveals a complex mutational landscape associated with drug resistance and novel therapeutic vulnerabilities},
  year={2022},
  pages={1891-1901},
  language={eng},
  issn={1592-8721},
  volume={107},
  number={8},
  note={Gesehen am 13.04.2023},
  journal={Haematologica},
  doi={10.3324/haematol.2021.279360},
}
@article{UBHD-68263864,
  author={Gießler, Klara Monika and Kleinheinz, Kortine and H{\"u}bschmann, Daniel and Balasubramanian, Gnana Prakash and Dubash, Taronish Dorab and Dieter, Sebastian M. and Siegl, Christine and Herbst, Friederike and Weber, Sarah and Hoffmann, Christopher M. and Fronza, Raffaele and Buchhalter, Ivo and Paramasivam, Nagarajan and Eils, Roland and Schmidt, Manfred and Kalle, Christof von and Schneider, Martin and Ulrich, Alexis and Scholl, Claudia and Fr{\"o}hling, Stefan and Weichert, Wilko and Brors, Benedikt and Schlesner, Matthias and Ball, Claudia R. and Glimm, Hanno},
  title={Genetic subclone architecture of tumor clone-initiating cells in colorectal cancer},
  year={2017},
  pages={2073-2088},
  language={eng},
  issn={1540-9538},
  volume={214},
  number={7},
  note={Published June 1, 2017 ; Gesehen am 20.06.2018},
  journal={Journal of experimental medicine},
  doi={10.1084/jem.20162017},
}
@article{UBHD-69062904,
  author={Gnjatic, Sacha and Ritter, Erika and B{\"u}chler, Markus W. and Giese, Nathalia and Brors, Benedikt and Frei, Claudia and Murray, Anne and Halama, Niels and Z{\"o}rnig, Inka and Chen, Yao-Tseng and Andrews, Christopher and Ritter, Gerd and Old, Lloyd J. and Odunsi, Kunle and J{\"a}ger, Dirk},
  title={Seromic profiling of ovarian and pancreatic cancer},
  year={2010},
  pages={5088-5093},
  language={eng},
  issn={1091-6490},
  volume={107},
  number={11},
  note={Gesehen am 05.04.2023},
  journal={Proceedings of the National Academy of Sciences of the United States of America},
  doi={10.1073/pnas.0914213107},
}
@article{UBHD-68570567,
  author={Gr{\"o}bner, Susanne and Jones, Barbara Christine and Buchhalter, Ivo and Johann, Pascal-David and Balasubramanian, Gnana Prakash and Bender, Sebastian and Hutter, Barbara and Sturm, Dominik and Pfaff, Elke and H{\"u}bschmann, Daniel and Heinold, Michael and Eils, J{\"u}rgen and Kulozik, Andreas and Witt, Hendrik and Witt, Olaf and Tilburg, Cornelis M. van and Klingebiel, Thomas and Brors, Benedikt and Pajtler, Kristian Wilfried and Kool, Marcel and Korbel, Jan Oliver and Schlesner, Matthias and Eils, Roland and Jones, David T. W. and Lichter, Peter and Zapatka, Marc and Pfister, Stefan},
  title={Author correction: The landscape of genomic alterations across childhood cancers},
  year={2018},
  pages={E10-E10},
  language={eng},
  issn={1476-4687},
  volume={559},
  number={7714},
  note={Gesehen am 27.04.2020},
  journal={Nature},
  doi={10.1038/s41586-018-0167-2},
}
@article{UBHD-68394778,
  author={Gr{\"o}schel, Stefan and H{\"u}bschmann, Daniel and Raimondi, Francesco and Horak, Peter and Kleinheinz, Kortine and Chudasama, Priya and Heilig, Christoph E. and Eils, Roland and Kalle, Christof von and Scholl, Claudia and Stenzinger, Albrecht and Brors, Benedikt and Russell, Robert B. and Glimm, Hanno and Fr{\"o}hling, Stefan},
  title={Defective homologous recombination DNA repair as therapeutic target in advanced chordoma},
  year={2019},
  pages={9 S.},
  language={eng},
  issn={2041-1723},
  volume={10(2019) Artikel-Nummer 1635},
  number={9 Seiten},
  note={Gesehen am 03.06.2019},
  journal={Nature Communications},
  doi={10.1038/s41467-019-09633-9},
}
@article{UBHD-67747298,
  author={Gu, Lei and Kuner, Ruprecht and S{\"u}ltmann, Holger and Brors, Benedikt and Korbel, Jan Oliver and Plass, Christoph and Eils, Roland},
  title={BAZ2A (TIP5) is involved in epigenetic alterations in prostate cancer and its overexpression predicts disease recurrence},
  year={2015},
  pages={22-30},
  language={eng},
  issn={1546-1718},
  volume={47},
  number={1},
  note={Published online 8 December 2014 ; Im PDF sind 3 weitere Seiten "Online methods" ; Gesehen am 21.01.2021},
  journal={Nature genetics},
  doi={10.1038/ng.3165},
}
@article{UBHD-68618454,
  author={Gu, Zuguang and Gu, Lei and Eils, Roland and Schlesner, Matthias and Brors, Benedikt},
  title={circlize implements and enhances circular visualization in R},
  year={2014},
  pages={2811-2812},
  language={eng},
  issn={1367-4811 and 1460-2059},
  volume={30},
  number={19},
  note={Gesehen am 20.07.2020},
  journal={Bioinformatics},
  doi={10.1093/bioinformatics/btu393},
}
@article{UBHD-68108869,
  author={Haller, Florian and Bieg, Matthias and Moskalev, Evgeny A. and Barthelmeß, Sarah and Geddert, Helene and Boltze, Carsten and Diessl, Nicolle and Braumandl, Karin and Brors, Benedikt and Iro, Heinrich and Hartmann, Arndt and Wiemann, Stefan and Agaimy, Abbas},
  title={Recurrent mutations within the amino-terminal region of β-catenin are probable key molecular driver events in sinonasal hemangiopericytoma},
  year={2015},
  pages={563-571},
  language={eng},
  issn={1525-2191},
  volume={185},
  number={2 vom: Feb.},
  note={Available online 4 December 2014 ; Gesehen am 25.03.2021},
  journal={The American journal of pathology},
  doi={10.1016/j.ajpath.2014.10.019},
}
@article{UBHD-68969851,
  author={Heilig, Christoph E. and Laßmann, Andreas and Mughal, Sadaf S. and Mock, Andreas and Pirmann, Sebastian and Teleanu, Maria-Veronica and Renner, Marcus and Andresen, Carolin and K{\"o}hler, Bruno Christian and Aybey, Bogac and Bauer, Sebastian and Siveke, Jens T. and Hamacher, Rainer and Folprecht, Gunnar and Richter, Stephan and Schr{\"o}ck, Evelin and Brandts, Christian Hubertus and Ahrens, Marit and Hohenberger, Peter and Egerer, Gerlinde and Kindler, Thomas and Boerries, Melanie and Illert, Anna L. and von Bubnoff, Nikolas and Apostolidis, Leonidas and Jost, Philipp J. and Westphalen, C. Benedikt and Weichert, Wilko and Keilholz, Ulrich and Klauschen, Frederick and Beck, Katja and Winter, Ulrike and Richter, Daniela and M{\"o}hrmann, Lino and Bitzer, Michael and Schulze-Osthoff, Klaus and Brors, Benedikt and Mechtersheimer, Gunhild and Kreutzfeldt, Simon and Heining, Christoph and Lipka, Daniel and Stenzinger, Albrecht and Schlenk, Richard Friedrich and Horak, Peter and Glimm, Hanno and H{\"u}bschmann, Daniel and Fr{\"o}hling, Stefan},
  title={Gene expression-based prediction of pazopanib efficacy in sarcoma},
  year={2022},
  pages={107-118},
  language={eng},
  issn={1879-0852},
  volume={172},
  note={Gesehen am 04.10.2021},
  journal={European journal of cancer},
  doi={10.1016/j.ejca.2022.05.025},
}
@article{UBHD-69009563,
  author={Heilig, Christoph E. and Horak, Peter and Kreutzfeldt, Simon and Teleanu, Maria-Veronica and Mock, Andreas and Renner, Marcus and Bhatti, Irfan A. and Hutter, Barbara and H{\"u}llein, Jennifer and Fr{\"o}hlich, Martina and Uhrig, Sebastian and S{\"u}ße, Heike and Heiligenthal, Laura and Ochsenreither, S. and Illert, A. L. and Vogel, A. and Desuki, A. and Heinemann, V. and Heidegger, S. and Bitzer, M. and Scheytt, M. and Brors, Benedikt and H{\"u}bschmann, Daniel and Baretton, G. and Stenzinger, Albrecht and Steindorf, Karen and Benner, Axel and J{\"a}ger, Dirk and Heining, C. and Glimm, Hanno and Fr{\"o}hling, Stefan and Schlenk, Richard Friedrich},
  title={Rationale and design of the CRAFT (Continuous ReAssessment with Flexible ExTension in Rare Malignancies) multicenter phase II trial},
  year={2021},
  pages={1-5},
  language={eng},
  issn={2059-7029},
  volume={6},
  note={Gesehen am 24.01.2023},
  journal={ESMO open},
  doi={10.1016/j.esmoop.2021.100310},
}
@article{UBHD-68576360,
  author={Hezaveh, Kebria and Kloetgen, Andreas and Bernhart, Stephan H. and Mahapatra, Kunal Das and Lenze, Dido and Richter, Julia and Haake, Andrea and Bergmann, Anke K. and Brors, Benedikt and Burkhardt, Birgit and Claviez, Alexander and Drexler, Hans G. and Eils, Roland and Haas, Siegfried and Hoffmann, Steve and Karsch, Dennis and Klapper, Wolfram and Kleinheinz, Kortine and Korbel, Jan Oliver and Kretzmer, Helene and Kreuz, Markus and K{\"u}ppers, Ralf and Lawerenz, Christian and Leich, Ellen and Loeffler, Markus and Mantovani-Loeffler, Luisa and López, Cristina and McHardy, Alice and M{\"o}ller, Peter and Rohde, Marius and Rosenstiel, Philip and Rosenwald, Andreas and Schilhabel, Markus and Schlesner, Matthias and Scholz, Ingrid and Stadler, Peter F. and Stilgenbauer, Stephan and Sungalee, Stéphanie and Szczepanowski, Monika and Tr{\"u}mper, Lorenz and Weniger, Marc A. and Siebert, Reiner and Borkhardt, Arndt and Hummel, Michael and Hoell, Jessica I.},
  title={Alterations of microRNA and microRNA-regulated messenger RNA expression in germinal center B-cell lymphomas determined by integrative sequencing analysis},
  year={2016},
  pages={1380-1389},
  language={eng},
  issn={1592-8721},
  volume={101},
  number={11},
  note={Gesehen am 13.05.2020},
  journal={Haematologica},
  doi={10.3324/haematol.2016.143891},
}
@article{UBHD-68728573,
  author={Hlevnjak, Mario and Schulze, Markus and Elgaafary, Shaymaa and Fremd, Carlo and Michel, Laura L. and Beck, Katja and Pf{\"u}tze, Katrin and Richter, Daniela and Wolf, Stephan and Horak, Peter and Kreutzfeldt, Simon and Pixberg, Constantin Frederic and Hutter, Barbara and Ishaque, Naveed and Hirsch, Steffen and Gieldon, Laura and Stenzinger, Albrecht and Springfeld, Christoph and Smetanay, Katharina and Seitz, Julia and Mavratzas, Athanasios and Brors, Benedikt and Kirsten, Romy and Sch{\"u}tz, Florian and Fr{\"o}hling, Stefan and Sinn, Peter and J{\"a}ger, Dirk and Thewes, Verena and Zapatka, Marc and Lichter, Peter and Schneeweiss, Andreas},
  title={CATCH},
  subtitle={a prospective precision oncology trial in metastatic breast cancer},
  year={2021},
  pages={676-686},
  language={eng},
  issn={2473-4284},
  volume={5},
  note={Gesehen am 27.04.2021},
  journal={JCO precision oncology},
  doi={10.1200/PO.20.00248},
}
@book{UBHD-68422960,
  author={H{\"o}fer, Thomas and Westermann, Frank and Eils, J{\"u}rgen and Brors, Benedikt and Korf, Ulrike},
  organization={Deutsches Krebsforschungszentrum / Modellierung Biologischer Systeme},
  title={Schlussbericht zum CancerSys-Verbundprojekt "MYC-NET - Aufkl{\"a}rung der Mechanismen MYC-getriebener Therapieresistenz neuroectodermaler Tumore", Teilprojekt Systembiologische Analyse},
  subtitle={Systembiologie in der Krebsforschung - CancerSys : Laufzeit des Vorhabens: 01.03.2012-28.02.2015, zuwendungsneutrale Verl{\"a}ngerung: 01.03.2015-30.09.2015},
  publisher={DKFZ},
  address={Heidelberg},
  year={2016},
  pages={33 Seiten},
  language={ger},
  note={F{\"o}rderkennzeichen BMBF 0316076A. - Verbund-Nummer 01109385 ; Der Bericht umfasst die Arbeiten aus den Teilprojekten 2, 3 und 6 des MYC-NET Verbundprojekts ; Unterschiede zwischen dem gedruckten Dokument und der elektronischen Ressource k{\"o}nnen nicht ausgeschlossen werden},
  keywords={Neuroblastom / Systembiologie / Genregulation / Myc},
}
@book{UBHD-68422962,
  author={H{\"o}fer, Thomas and Westermann, Frank and Eils, J{\"u}rgen and Brors, Benedikt and Korf, Ulrike},
  organization={Deutsches Krebsforschungszentrum / Modellierung Biologischer Systeme},
  title={Schlussbericht zum CancerSys-Verbundprojekt "MYC-NET - Aufkl{\"a}rung der Mechanismen MYC-getriebener Therapieresistenz neuroectodermaler Tumore", Teilprojekt Systembiologische Analyse},
  subtitle={Systembiologie in der Krebsforschung - CancerSys : Laufzeit des Vorhabens: 01.03.2012-28.02.2015, zuwendungsneutrale Verl{\"a}ngerung: 01.03.2015-30.09.2015},
  publisher={DKFZ},
  address={Heidelberg},
  year={2016},
  pages={1 Online-Ressource (33 Seiten, 639,98 KB)},
  language={ger},
  note={F{\"o}rderkennzeichen BMBF 0316076A. - Verbund-Nummer 01109385 ; Der Bericht umfasst die Arbeiten aus den Teilprojekten 2, 3 und 6 des MYC-NET Verbundprojekts ; Unterschiede zwischen dem gedruckten Dokument und der elektronischen Ressource k{\"o}nnen nicht ausgeschlossen werden},
  doi={10.2314/GBV:883839237},
  keywords={Neuroblastom / Systembiologie / Genregulation / Myc},
}
@article{UBHD-68749247,
  author={Horak, Peter and Hutter, Barbara and Mock, Andreas and H{\"u}llein, Jennifer and Gieldon, Laura and Teleanu, Maria-Veronica and Heilig, Christoph E. and Lipka, Daniel and Allg{\"a}uer, Michael and Endris, Volker and Neumann, Olaf and Penzel, Roland and Wolf, Stephan and Buchhalter, Ivo and Hohenberger, Peter and Kroiß, Matthias and Schirmacher, Peter and Schlenk, Richard Friedrich and Keilholz, Ulrich and Klauschen, Frederick and Folprecht, Gunnar and Siveke, Jens and Brandts, Christian Hubertus and Kindler, Thomas and B{\"o}rries, Melanie and Illert, Anna Lena and Bubnoff, Nikolas von and Schulze-Osthoff, Klaus and Kalle, Christof von and Klink, Barbara and Brors, Benedikt and Stenzinger, Albrecht and Schr{\"o}ck, Evelin and H{\"u}bschmann, Daniel and Weichert, Wilko and Glimm, Hanno and Fr{\"o}hling, Stefan},
  title={Comprehensive genomic and transcriptomic analysis for guiding therapeutic decisions in patients with rare cancers},
  year={2021},
  pages={2780-2795},
  language={eng},
  issn={2159-8290},
  volume={11},
  number={11},
  note={Gesehen am 16.06.2021},
  journal={Cancer discovery},
  doi={10.1158/2159-8290.CD-21-0126},
}
@article{UBHD-68301919,
  author={Horak, Peter and Heining, Christoph and Gr{\"o}schel, Stefan and Hutter, Barbara and Fr{\"o}hlich, Martina and H{\"u}bschmann, Daniel and Schlesner, Matthias and Eils, Roland and Richter, Daniela and Pf{\"u}tze, Katrin and Ge{\"o}rg, Christina and Meissburger, Bettina and Wolf, Stephan and Penzel, Roland and Herpel, Esther and Kirchner, Martina and Lier, Amelie and Endris, Volker and Singer, Stephan and Schirmacher, Peter and Stenzinger, Albrecht and Schlenk, Richard Friedrich and Brors, Benedikt and Kalle, Christof von and Glimm, Hanno and Fr{\"o}hling, Stefan},
  title={Precision oncology based on omics data},
  subtitle={the NCT Heidelberg experience},
  year={2017},
  pages={877-886},
  language={eng},
  issn={1097-0215},
  volume={141},
  number={5},
  note={Gesehen am 04.09.2018},
  journal={International journal of cancer},
  doi={10.1002/ijc.30828},
}
@article{UBHD-68588678,
  author={Horak, Peter and Weischenfeldt, Joachim and Amsberg, Gunhild von and Beyer, Burkhard and Sch{\"u}tte, Andreas and Uhrig, Sebastian and Gieldon, Laura and Klink, Barbara and Feuerbach, Lars and H{\"u}bschmann, Daniel and Kreutzfeldt, Simon and Heining, Christoph and Maier, Sebastian and Hutter, Barbara and Penzel, Roland and Schlesner, Matthias and Eils, Roland and Sauter, Guido and Stenzinger, Albrecht and Brors, Benedikt and Schr{\"o}ck, Evelin and Glimm, Hanno and Fr{\"o}hling, Stefan and Schlomm, Thorsten},
  title={Response to olaparib in a PALB2 germline mutated prostate cancer and genetic events associated with resistance},
  year={2019},
  pages={10 S.},
  language={eng},
  issn={2373-2873},
  volume={5(2019},
  note={Gesehen am 18.06.2020},
  journal={Cold Spring Harbor molecular case studies},
  doi={10.1101/mcs.a003657},
}
@article{UBHD-67970363,
  author={Hovestadt, Volker and Jones, David T. W. and Kool, Marcel and Bartholom{\"a}, Cynthia C. and Kalle, Christof von and Eils, J{\"u}rgen and Milde, Till and Witt, Olaf and Scheurlen, Wolfram and Brors, Benedikt and Eils, Roland and Korshunov, Andrey and Zapatka, Marc and Pfister, Stefan and Lichter, Peter},
  title={Decoding the regulatory landscape of medulloblastoma using DNA methylation sequencing},
  year={2014},
  pages={537-541},
  language={eng},
  issn={1476-4687},
  volume={510},
  number={7506},
  note={Gesehen am 21.04.2016},
  journal={Nature},
  doi={10.1038/nature13268},
}
@article{UBHD-68873825,
  author={H{\"u}bschmann, Daniel and Kleinheinz, Kortine and Wagener, Rabea and Bernhart, Stephan H. and López, Cristina and Toprak, Umut and Sungalee, Stéphanie and Ishaque, Naveed and Kretzmer, Helene and Kreuz, Markus and Waszak, Sebastian Martin and Paramasivam, Nagarajan and Ammerpohl, Ole and Aukema, Sietse M. and Beekman, Renée and Bergmann, Anke K. and Bieg, Matthias and Binder, Hans and Borkhardt, Arndt and Borst, Christoph and Brors, Benedikt and Bruns, Philipp and Carrillo de Santa Pau, Enrique and Claviez, Alexander and Doose, Gero and Haake, Andrea and Karsch, Dennis and Haas, Siegfried and Hansmann, Martin-Leo and Hoell, Jessica I. and Hovestadt, Volker and Huang, Bingding and Hummel, Michael and J{\"a}ger-Schmidt, Christina and Kerssemakers, Jules and Korbel, Jan Oliver and Kube, Dieter and Lawerenz, Christian and Lenze, Dido and Martens, Joost H. A. and Ott, German and Radlwimmer, Bernhard and Reisinger, Eva and Richter, Julia and Rico, Daniel and Rosenstiel, Philip and Rosenwald, Andreas and Schillhabel, Markus and Stilgenbauer, Stephan and Stadler, Peter F. and Martín-Subero, José I. and Szczepanowski, Monika and Warsow, Gregor and Weniger, Marc A. and Zapatka, Marc and Valencia, Alfonso and Stunnenberg, Hendrik G. and Lichter, Peter and M{\"o}ller, Peter and Loeffler, Markus and Eils, Roland and Klapper, Wolfram and Hoffmann, Steve and Tr{\"u}mper, Lorenz and K{\"u}ppers, Ralf and Schlesner, Matthias and Siebert, Reiner},
  title={Mutational mechanisms shaping the coding and noncoding genome of germinal center derived B-cell lymphomas},
  year={2021},
  pages={2002-2016},
  language={eng},
  issn={1476-5551},
  volume={35},
  number={7},
  note={Affiliations: Daniel H{\"u}bschmann, Kortine Kleinheinz, Rabea Wagener, Stephan H. Bernhart, Cristina López, Umut H. Toprak, Stephanie Sungalee, Naveed Ishaque, Helene Kretzmer, Markus Kreuz, Sebastian M. Waszak, Nagarajan Paramasivam, Ole Ammerpohl, Sietse M. Aukema, Renée Beekman, Anke K. Bergmann, Matthias Bieg, Hans Binder, Arndt Borkhardt, Christoph Borst, Benedikt Brors, Philipp Bruns, Enrique Carrillo de Santa Pau, Alexander Claviez, Gero Doose, Andrea Haake, Dennis Karsch, Siegfried Haas, Martin-Leo Hansmann, Jessica I. Hoell, Volker Hovestadt, Bingding Huang, Michael Hummel, Christina J{\"a}ger-Schmidt, Jules N.A. Kerssemakers, Jan O. Korbel, Dieter Kube, Chris Lawerenz, Dido Lenze, Joost H.A. Martens, German Ott, Bernhard Radlwimmer, Eva Reisinger, Julia Richter, Daniel Rico, Philip Rosenstiel, Andreas Rosenwald, Markus Schillhabel, Stephan Stilgenbauer, Peter F. Stadler, José I. Martín-Subero, Monika Szczepanowski, Gregor Warsow, Marc A. Weniger, Marc Zapatka, Alfonso Valencia, Hendrik G. Stunnenberg, Peter Lichter, Peter M{\"o}ller, Markus Loeffler, Roland Eils, Wolfram Klapper, Steve Hoffmann, Lorenz Tr{\"u}mper, ICGC MMML-Seq consortium, ICGC DE-Mining consortium, BLUEPRINT consortium, Ralf K{\"u}ppers, Matthias Schlesner, Reiner Siebert ; Gesehen am 03.02.2022},
  journal={Leukemia},
  doi={10.1038/s41375-021-01251-z},
}
@article{UBHD-68478956,
  author={H{\"u}llein, Jennifer and Słabicki, Mikołaj and Rosolowski, Maciej and Jethwa, Alexander and Habringer, Stefan and Tomska, Katarzyna and Kurilov, Roma and Lu, Junyan and Scheinost, Sebastian and Wagener, Rabea and Huang, Zhiqin and Lukas, Marina and Yavorska, Olena and Helfrich, Hanne and Scholtysik, René and Bonneau, Kyle and Tedesco, Donato and K{\"u}ppers, Ralf and Klapper, Wolfram and Pott, Christiane and Stilgenbauer, Stephan and Burkhardt, Birgit and L{\"o}ffler, Markus and Tr{\"u}mper, Lorenz H. and Hummel, Michael and Brors, Benedikt and Zapatka, Marc and Siebert, Reiner and Kreuz, Markus and Keller, Ulrich and Huber, Wolfgang and Zenz, Thorsten},
  title={MDM4 is targeted by 1q gain and drives disease in Burkitt Lymphoma},
  year={2019},
  pages={3125-3138},
  language={eng},
  issn={1538-7445},
  volume={79},
  number={12},
  note={Gesehen am 21.01.2020},
  journal={Cancer research},
  doi={10.1158/0008-5472.CAN-18-3438},
}
@article{UBHD-69079325,
  author={Hudson, Thomas J. and Eils, Roland and Korbel, Jan Oliver and Korshunov, Andrey and Pfister, Stefan and Kalle, Christof von and Lichter, Peter and Brors, Benedikt and Radlwimmer, Bernhard},
  organization={International Cancer Genome Consortium},
  title={International network of cancer genome projects},
  year={2010},
  pages={993-998},
  language={eng},
  issn={1476-4687},
  volume={464},
  number={7291},
  note={The International Cancer Genome Consortium: Thomas J. Hudson (Chairperson), Warwick Anderson, Axel Aretz, Anna D. Barker, Cindy Bell, Rosa R. Bernabé, M. K. Bhan, Fabien Calvo, Iiro Eerola, Daniela S. Gerhard, Alan Guttmacher, Mark Guyer, Fiona M. Hemsley, Jennifer L. Jennings, David Kerr, Peter Klatt, Patrik Kolar, Jun Kusuda, David P. Lane, Frank Laplace, Youyong Lu, Gerd Nettekoven, Brad Ozenberger, Jane Peterson, T.S. Rao, Jacques Remacle, Alan J. Schafer, Tatsuhiro Shibata, Michael R. Stratton, Joseph G. Vockley, Koichi Watanabe, Huanming Yang, Matthew M. F. Yuen, Bartha M. Knoppers (Leader), Martin Bobrow, Anne Cambon-Thomsen, Lynn G. Dressler, Stephanie O. M. Dyke, Yann Joly, Kazuto Kato, Karen L. Kennedy, Pilar Nicolás, Michael J. Parker, Emmanuelle Rial-Sebbag, Carlos M. Romeo-Casabona, Kenna M. Shaw, Susan Wallace, Georgia L. Wiesner, Nikolajs Zeps, Peter Lichter (Leader), Andrew V. Biankin, Christian Chabannon, Lynda Chin, Bruno Clément, Enrique de Alava, Françoise Degos, Martin L. Ferguson, Peter Geary, D. Neil Hayes, Thomas J. Hudson, Amber L. Johns, Arek Kasprzyk, Hidewaki Nakagawa, Robert Penny, Miguel A. Piris, Rajiv Sarin, Aldo Scarpa, Tatsuhiro Shibata, Marc van de Vijver, P. Andrew Futreal (Leader), Hiroyuki Aburatani, Mónica Bayés, David D.L. Bowtell, Peter J. Campbell, Xavier Estivill, Daniela S. Gerhard, Sean M. Grimmond, Ivo Gut, Martin Hirst, Carlos López-Otín, Partha Majumder, Marco Marra, John D. McPherson, Hidewaki Nakagawa, Zemin Ning, Xose S. Puente, Yijun Ruan, Tatsuhiro Shibata, Michael R. Stratton, Hendrik G. Stunnenberg, Harold Swerdlow, Victor E. Velculescu, Richard K. Wilson, Hong H. Xue, Liu Yang, Paul T. Spellman (Leader), Gary D. Bader, Paul C. Boutros, Peter J. Campbell, Paul Flicek, Gad Getz, Roderic Guigó, Guangwu Guo, David Haussler, Simon Heath, Tim J. Hubbard, Tao Jiang, Steven M. Jones, Qibin Li, Nuria López-Bigas, Ruibang Luo, Lakshmi Muthuswamy, B. F. Francis Ouellette, John V. Pearson, Xose S. Puente, Victor Quesada, Benjamin J. Raphael, Chris Sander, Tatsuhiro Shibata, Terence P. Speed, Lincoln D. Stein, Joshua M. Stuart, Jon W. Teague, Yasushi Totoki, Tatsuhiko Tsunoda, Alfonso Valencia, David A. Wheeler, Honglong Wu, Shancen Zhao, Guangyu Zhou, Lincoln D. Stein (Leader), Roderic Guigó, Tim J. Hubbard, Yann Joly, Steven M. Jones, Arek Kasprzyk, Mark Lathrop, Nuria López-Bigas, B. F. Francis Ouellette, Paul T. Spellman, Jon W. Teague, Gilles Thomas, Alfonso Valencia, Teruhiko Yoshida, Karen L. Kennedy (Leader), Myles Axton, Stephanie O. M. Dyke, P. Andrew Futreal, Daniela S. Gerhard, Chris Gunter, Mark Guyer, Thomas J. Hudson, John D. McPherson, Linda J. Miller, Brad Ozenberger, Kenna M. Shaw, Arek Kasprzyk (Leader), Lincoln D. Stein (Leader), Junjun Zhang, Syed A. Haider, Jianxin Wang, Christina K. Yung, Anthony Cross, Yong Liang, Saravanamuttu Gnaneshan, Jonathan Guberman, Jack Hsu, Martin Bobrow (Leader), Don R. C. Chalmers, Karl W. Hasel, Yann Joly, Terry S. H. Kaan, Karen L. Kennedy, Bartha M. Knoppers, William W. Lowrance, Tohru Masui, Pilar Nicolás, Emmanuelle Rial-Sebbag, Laura Lyman Rodriguez, Catherine Vergely, Teruhiko Yoshida, Sean M. Grimmond (Leader), Andrew V. Biankin, David D. L. Bowtell, Nicole Cloonan, Anna deFazio, James R. Eshleman, Dariush Etemadmoghadam, Brooke A. Gardiner, James G. Kench, Aldo Scarpa, Robert L. Sutherland, Margaret A. Tempero, Nicola J. Waddell, Peter J. Wilson, John D. McPherson (Leader), Steve Gallinger, Ming-Sound Tsao, Patricia A. Shaw, Gloria M. Petersen, Debabrata Mukhopadhyay, Lynda Chin, Ronald A. DePinho, Sarah Thayer, Lakshmi Muthuswamy, Kamran Shazand, Timothy Beck, Michelle Sam, Lee Timms, Vanessa Ballin, Youyong Lu (Leader), Jiafu Ji, Xiuqing Zhang, Feng Chen, Xueda Hu, Guangyu Zhou, Qi Yang, Geng Tian, Lianhai Zhang, Xiaofang Xing, Xianghong Li, Zhenggang Zhu, Yingyan Yu, Jun Yu, Huanming Yang, Mark Lathrop (Leader), J{\"o}rg Tost, Paul Brennan, Ivana Holcatova, David Zaridze, Alvis Brazma, Lars Egevad, Egor Prokhortchouk, Rosamonde Elizabeth Banks, Mathias Uhlén, Anne Cambon-Thomsen, Juris Viksna, Fredrik Ponten, Konstantin Skryabin, Michael R. Stratton (Leader), P. Andrew Futreal, Ewan Birney, Ake Borg, Anne-Lise Børresen-Dale, Carlos Caldas, John A. Foekens, Sancha Martin, Jorge S. Reis-Filho, Andrea L. Richardson, Christos Sotiriou, Hendrik G. Stunnenberg, Gilles Thomas, Marc van de Vijver, Laura van’t Veer, Fabien Calvo (Leader), Daniel Birnbaum, Hélène Blanche, Pascal Boucher, Sandrine Boyault, Christian Chabannon, Ivo Gut, Jocelyne D. Masson-Jacquemier, Mark Lathrop, Iris Pauporté, Xavier Pivot, Anne Vincent-Salomon, Eric Tabone, Charles Theillet, Gilles Thomas, J{\"o}rg Tost, Isabelle Treilleux, Fabien Calvo (Leader), Paulette Bioulac-Sage, Bruno Clément, Thomas Decaens, Françoise Degos, Dominique Franco, Ivo Gut, Marta Gut, Simon Heath, Mark Lathrop, Didier Samuel, Gilles Thomas, The International Cancer Genome Consortium, Executive committee, Ethics and policy committee, Tissue and clinical annotation working group, Technologies working group, Bioinformatics analyses working group, Data coordination and management working group, data tiers and publications working group Data release, Data coordination centre, International data access committee, Cancer genome projects: Pancreatic cancer (ductal adenocarcinoma) and ovarian cancer (serous adenocarcinoma) (Australia), Pancreatic cancer (ductal adenocarcinomas) (Canada), Gastric cancer (intestinal- and diffuse-type) (China), Renal cancer (renal cell carcinoma; focus on but not limited to clear cell subtype) (European Union/France), Breast cancer (subtypes defined by an amplification of ER+ HER ductal-type) (European Union/United Kingdom), Breast cancer (subtype defined by an amplification of the HER2 gene) (France), Liver cancer (hepatocellular carcinoma; secondary to alcohol and adiposity) (France) ; Gesehen am 23.05.2023},
  journal={Nature},
  doi={10.1038/nature08987},
}
@article{UBHD-68491160,
  author={Ishaque, Naveed and Abba, Mohammed L. and Patil, Nitin and Paramasivam, Nagarajan and H{\"u}bschmann, Daniel and Leupold, J{\"o}rg and Balasubramanian, Gnana Prakash and Kleinheinz, Kortine and Toprak, Umut and Hutter, Barbara and Benner, Axel and Kerssemakers, Jules and Marx, Alexander and Eils, J{\"u}rgen and Schlesner, Matthias and Eils, Roland and Brors, Benedikt and Allgayer, Heike},
  title={Whole genome sequencing puts forward hypotheses on metastasis evolution and therapy in colorectal cancer},
  year={2018},
  pages={14 S.},
  language={eng},
  issn={2041-1723},
  volume={9(2018) Artikel-Nummer 4782},
  number={14 Seiten},
  note={Gesehen am 19.02.2020},
  journal={Nature Communications},
  doi={10.1038/s41467-018-07041-z},
}
@article{UBHD-68980320,
  author={Jahn, Arne and Rump, A. and Widmann, T. J. and Heining, C. and Horak, Peter and Hutter, Barbara and Paramasivam, Nagarajan and Uhrig, Sebastian and Gieldon, Laura and Drukewitz, S. and K{\"u}bler, A. and Bermudez, M. and Hackmann, K. and Porrmann, J. and Wagner, J. and Arlt, M. and Franke, M. and Fischer, J. and Kowalzyk, Z. and William, D. and Weth, V. and Oster, S. and Fr{\"o}hlich, M. and H{\"u}llein, Jennifer and Valle González, C. and Kreutzfeldt, Simon and Mock, Andreas and Heilig, Christoph E. and Lipka, Daniel and M{\"o}hrmann, L. and Hanf, D. and Oleś, M. and Teleanu, Maria-Veronica and Allg{\"a}uer, Michael and Ruhnke, L. and Kutz, O. and Knurr, Alexander and Laßmann, Andreas and Endris, Volker and Neumann, Olaf and Penzel, Roland and Beck, K. and Richter, D. and Winter, U. and Wolf, S. and Pf{\"u}tze, Katrin and Ge{\"o}rg, C. and Meissburger, Bettina and Buchhalter, Ivo and Augustin, M. and Aulitzky, W. E. and Hohenberger, Peter and Kroiss, M. and Schirmacher, Peter and Schlenk, Richard Friedrich and Keilholz, Ulrich and Klauschen, Frederick and Folprecht, G. and Bauer, S. and Siveke, J. T. and Brandts, C. H. and Kindler, T. and Boerries, M. and Illert, A. L. and von Bubnoff, N. and Jost, P. J. and Metzeler, K. H. and Bitzer, M. and Schulze-Osthoff, K. and Kalle, Christof von and Brors, Benedikt and Stenzinger, Albrecht and Weichert, Wilko and H{\"u}bschmann, Daniel and Fr{\"o}hling, Stefan and Glimm, Hanno and Schr{\"o}ck, E. and Klink, Barbara},
  title={Comprehensive cancer predisposition testing within the prospective MASTER trial identifies hereditary cancer patients and supports treatment decisions for rare cancers},
  year={2022},
  pages={1186-1199},
  language={eng},
  issn={1569-8041},
  volume={33},
  number={11},
  note={Online ver{\"o}ffentlicht am 18. August 2022, Artikelversion 25. Oktober 2022 ; Gesehen am 31.10.2022},
  journal={Annals of oncology},
  doi={10.1016/j.annonc.2022.07.008},
}
@article{UBHD-68215366,
  author={Jones, Barbara Christine and Tilburg, Cornelis M. van and Balasubramanian, Gnana Prakash and Fiesel, Petra and Witt, Ruth and Freitag, Angelika and Boudalil, Miream and Hutter, Barbara and Taylor, Lenka A. and Sutter, Christian and Bartram, Claus R. and Milde, Till and Pfaff, Elke and Kulozik, Andreas and Brors, Benedikt and Deimling, Andreas von and Capper, David and Pfister, Stefan and Witt, Olaf},
  title={Next-generation personalised medicine for high-risk paediatric cancer patients - The INFORM pilot study},
  year={2016},
  pages={91-101},
  language={eng},
  issn={1879-0852},
  volume={65},
  note={Gesehen am 31.01.2018},
  journal={European journal of cancer},
  doi={10.1016/j.ejca.2016.06.009},
}
@article{UBHD-68573696,
  author={Jones, David T. W. and J{\"a}ger, Natalie and Kool, Marcel and Zichner, Thomas and Hutter, Barbara and Sultan, Marc and Cho, Yoon-Jae and Pugh, Trevor and Hovestadt, Volker and St{\"u}tz, Adrian M. and Rausch, Tobias and Warnatz, Hans-J{\"o}rg and Ryzhova, Marina and Bender, Sebastian and Sturm, Dominik and Pleier, Sabrina Valesca and Şeker-Cin, Huriye and Pfaff, Elke and Sieber, Laura and Wittmann, Andrea and Remke, Marc and Witt, Hendrik and Hutter, Sonja and Tzaridis, Theophilos-Dimitrios and Weischenfeldt, Joachim and Raeder, Benjamin and Avci, Meryem and Amstislavskiy, Vyacheslav and Zapatka, Marc and Weber, Ursula D. and Wang, Qi and Lasitschka, B{\"a}rbel and Bartholom{\"a}, Cynthia C. and Schmidt, Manfred and Kalle, Christof von and Ast, Volker and Lawerenz, Christian and Eils, J{\"u}rgen and Kabbe, Rolf and Benes, Vladimir and Sluis, Peter van and Koster, Jan and Volckmann, Richard and Shih, David and Betts, Matthew J. and Russell, Robert B. and Coco, Simona and Paolo Tonini, Gian and Sch{\"u}ller, Ulrich and Hans, Volkmar and Graf, Norbert and Kim, Yoo-Jin and Monoranu, Camelia and Roggendorf, Wolfgang and Unterberg, Andreas and Herold-Mende, Christel and Milde, Till and Kulozik, Andreas and Deimling, Andreas von and Witt, Olaf and Maass, Eberhard and R{\"o}ssler, Jochen and Ebinger, Martin and Schuhmann, Martin U. and Fr{\"u}hwald, Michael and Hasselblatt, Martin and Jabado, Nada and Rutkowski, Stefan and Bueren, André von and Williamson, Dan and Clifford, Steven C. and McCabe, Martin G. and Peter Collins, V. and Wolf, Stephan and Wiemann, Stefan and Lehrach, Hans and Brors, Benedikt and Scheurlen, Wolfram and Felsberg, J{\"o}rg and Reifenberger, Guido and Northcott, Paul A. and Taylor, Michael D. and Meyerson, Matthew and Pomeroy, Scott L. and Yaspo, Marie-Laure and Korbel, Jan Oliver and Korshunov, Andrey and Eils, Roland and Pfister, Stefan and Lichter, Peter},
  title={Dissecting the genomic complexity underlying medulloblastoma},
  year={2012},
  pages={100-105},
  language={eng},
  issn={0028-0836},
  volume={488},
  number={7409 vom: 20. Juni},
  journal={Nature},
}
@article{UBHD-69165661,
  author={Kandala, Sridhar and Ramos, Maria and Voith von Voithenberg, Lena and Díaz-Jiménez, Alberto and Chocarro, Sara and Keding, Johanna and Brors, Benedikt and Imbusch, Charles and Sotillo, Rocio},
  title={Chronic chromosome instability induced by Plk1 results in immune suppression in breast cancer},
  year={2023},
  pages={1-22},
  language={eng},
  issn={2211-1247},
  volume={42},
  note={Gesehen am 25.01.2024},
  journal={Cell reports},
  doi={10.1016/j.celrep.2023.113266},
}
@article{UBHD-68656931,
  author={Kim-Wanner, Soo-Zin and Assenov, Yassen and Nair, Mridul Balakrishnan and Weichenhan, Dieter and Benner, Axel and Becker, Natalia and Landwehr, Katharina and Kuner, Ruprecht and S{\"u}ltmann, Holger and Esteller, Manel and Koch, Ina and Lindner, Michael and Meister, Michael and Thomas, Michael and Bieg, Matthias and Klingm{\"u}ller, Ursula and Schlesner, Matthias and Warth, Arne and Brors, Benedikt and Seifried, Erhard and B{\"o}nig, Halvard and Plass, Christoph and Risch, Angela and Muley, Thomas},
  title={Genome-wide DNA methylation profiling in early stage I lung adenocarcinoma reveals predictive aberrant methylation in the promoter region of the long noncoding RNA PLUT},
  subtitle={an exploratory study},
  year={2020},
  pages={1338-1350},
  language={eng},
  issn={1556-1380},
  volume={15},
  number={8},
  note={Gesehen am 03.11.2020},
  journal={Journal of thoracic oncology},
  doi={10.1016/j.jtho.2020.03.023},
}
@article{UBHD-68714874,
  author={Kocak, Hayriye and Ackermann, S. and Hero, B. and Kahlert, Y. and Oberthuer, A. and Juraeva, Dilafruz and Roels, F. and Theissen, J. and Westermann, Frank and Deubzer, Hedwig and Ehemann, Volker and Brors, Benedikt and Odenthal, M. and Berthold, F. and Fischer, M.},
  title={Hox-C9 activates the intrinsic pathway of apoptosis and is associated with spontaneous regression in neuroblastoma},
  year={2013},
  pages={1-11},
  language={eng},
  issn={2041-4889},
  volume={4},
  note={Gesehen am 07.06.2022},
  journal={Cell death & disease},
  doi={10.1038/cddis.2013.84},
}
@article{UBHD-68714947,
  author={Koch, Yvonne and Wolf, Thomas and Sorger, Peter K. and Eils, Roland and Brors, Benedikt},
  title={Decision-tree based model analysis for efficient identification of parameter relations leading to different signaling states},
  year={2013},
  pages={1-10},
  language={eng},
  issn={1932-6203},
  volume={8},
  note={Gesehen am 16.12.2021},
  journal={PLOS ONE},
  doi={10.1371/journal.pone.0082593},
}
@article{UBHD-68708346,
  author={K{\"o}lsche, Christian and Schrimpf, Daniel and Stichel, Damian and Sill, Martin and Sahm, Felix and Reuss, David and Jones, Barbara Christine and Heilig, Christoph E. and Horak, Peter and Stark, Sebastian and Johann, Pascal-David and Selt, Florian and Ecker, Jonas and Sturm, Dominik and Pajtler, Kristian Wilfried and Reinhardt, Annekathrin and Wefers, Annika K. and Sievers, Philipp and Suwala, Abigail Kora and Fernández Klett, Francisco and Casalini, Belén and Korshunov, Andrey and Kommoss, Felix and Kriegsmann, Mark and Milde, Till and Witt, Olaf and Kulozik, Andreas and Kool, Marcel and Gr{\"u}newald, Thomas G. P. and Wick, Wolfgang and Platten, Michael and Unterberg, Andreas and Uhl, Matthias and Abdollahi, Amir and Debus, J{\"u}rgen and Lehner, Burkhard and Schirmacher, Peter and Stenzinger, Albrecht and Brors, Benedikt and Glimm, Hanno and Hohenberger, Peter and Mechtersheimer, Gunhild and Jones, David T. W. and Fr{\"o}hling, Stefan and Pfister, Stefan and Deimling, Andreas von},
  title={Sarcoma classification by DNA methylation profiling},
  year={2021},
  pages={1-10},
  language={eng},
  issn={2041-1723},
  volume={12},
  number={Artikel-ID 498},
  note={Gesehen am 09.03.2021},
  journal={Nature Communications},
  doi={10.1038/s41467-020-20603-4},
}
@article{UBHD-69056863,
  author={K{\"o}rber, Verena and Stainczyk, Sabine and Kurilov, Roman and Henrich, Kai-Oliver and Hero, Barbara and Brors, Benedikt and Westermann, Frank and H{\"o}fer, Thomas},
  title={Neuroblastoma arises in early fetal development and its evolutionary duration predicts outcome},
  year={2023},
  pages={1-12},
  language={eng},
  issn={1546-1718},
  volume={55},
  number={4},
  note={Gesehen am 28.03.2023},
  journal={Nature genetics},
  doi={10.1038/s41588-023-01332-y},
}
@article{UBHD-68460155,
  author={Kordes, Maximilian and Heining, Christoph and Hutter, Barbara and Richter, Daniela and Ge{\"o}rg, Christina and Scholl, Claudia and Gr{\"o}schel, Stefan and Roth, Wilfried and Kalle, Christof von and J{\"a}ger, Dirk and Brors, Benedikt and Weichert, Wilko and Gr{\"u}llich, Carsten and Glimm, Hanno and Fr{\"o}hling, Stefan},
  title={Cooperation of BRAF F595L and mutant HRAS in histiocytic sarcoma provides new insights into oncogenic BRAF signaling},
  year={2016},
  pages={937-946},
  language={eng},
  issn={1476-5551},
  volume={30},
  number={4},
  note={Advance online publication, 18 December 2015 ; Gesehen am 26.11.2019},
  journal={Leukemia},
  doi={10.1038/leu.2015.319},
}
@article{UBHD-68803169,
  author={Kreis, Julian and Nedić, Boro and Mazur, Johanna and Urban, Miriam and Schelhorn, Sven-Eric and Grombacher, Thomas and Geist, Felix and Brors, Benedikt and Z{\"u}hlsdorf, Michael and Staub, Eike},
  title={RosettaSX},
  subtitle={reliable gene expression signature scoring of cancer models and patients},
  year={2021},
  pages={1069-1077},
  language={eng},
  issn={1476-5586},
  volume={23},
  number={11 vom: Nov.},
  note={Gesehen am 18.11.2021},
  journal={Neoplasia},
  doi={10.1016/j.neo.2021.08.005},
}
@article{UBHD-68638736,
  author={Kurilov, Roman and Haibe-Kains, Benjamin and Brors, Benedikt},
  title={Assessment of modelling strategies for drug response prediction in cell lines and xenografts},
  year={2020},
  language={eng},
  issn={2045-2322},
  volume={10(2020) Artikel-Nummer 2849},
  number={11 Seiten},
  note={Gesehen am 18.09.2020},
  journal={Scientific reports},
  doi={10.1038/s41598-020-59656-2},
}
@article{UBHD-69050965,
  author={Letellier, Elisabeth and Kumar, Sachin and Sancho-Martinez, Ignacio and Krauth, Stefanie J. and Funke-Kaiser, Anne and Laudenklos, Sabrina Angelina and Konecki, Katrin and Klußmann, Stefan and Corsini, Nina and Kleber, Susanne and Drost, Natalia and Neumann, Andreas and Lévi-Strauss, Matthieu and Brors, Benedikt and Gretz, Norbert and Edler, Lutz and Fischer, Carmen and Hill, Oliver and Thiemann, Meinolf and Biglari, Bahram and Karray, Saoussen and Martín-Villalba, Ana},
  title={CD95-ligand on peripheral myeloid cells activates syk kinase to trigger their recruitment to the inflammatory site},
  year={2010},
  pages={240-252},
  language={eng},
  issn={1097-4180},
  volume={32},
  number={2 vom: Feb.},
  note={Gesehen am 13.03.2023},
  journal={Immunity},
  doi={10.1016/j.immuni.2010.01.011},
}
@book{UBHD-68423025,
  author={Lichter, Peter and Pfister, Stefan and Brors, Benedikt and Plass, Christoph and Eils, Roland},
  organization={Deutsches Krebsforschungszentrum},
  title={Projekttitel: Charakterisierung des nicht-Protein-kodierenden Subgenoms in Tumorzellen durch Mining genomweiter Omics-Datens{\"a}tze aus den deutschen ICGC Projekten},
  subtitle={Schlussbericht ICGC-DE-Mining},
  publisher={DKFZ},
  address={[Heidelberg]},
  year={2018},
  pages={10 Bl{\"a}tter, 2 ungez{\"a}hlte Bl{\"a}tter},
  language={ger},
  note={F{\"o}rderkennzeichen BMBF 01KU1505A. - Verbund-Nummer 01166347 ; Autoren dem Berichtsblatt entnommen. - Paralleltitel dem englischen Berichtsblatt entnommen ; Unterschiede zwischen dem gedruckten Dokument und der elektronischen Ressource k{\"o}nnen nicht ausgeschlossen werden},
  keywords={Prostatakrebs / Hirntumor / Lymphom / High throughput screening / Data Mining / Differentielle Genexpression / Genom / Transkriptom / Chromatin / Histone / Molekulare Medizin},
}
@book{UBHD-68423026,
  author={Lichter, Peter and Pfister, Stefan and Brors, Benedikt and Plass, Christoph and Eils, Roland},
  organization={Deutsches Krebsforschungszentrum},
  title={Projekttitel: Charakterisierung des nicht-Protein-kodierenden Subgenoms in Tumorzellen durch Mining genomweiter Omics-Datens{\"a}tze aus den deutschen ICGC Projekten},
  subtitle={Schlussbericht ICGC-DE-Mining},
  publisher={DKFZ},
  address={[Heidelberg]},
  year={2018},
  pages={1 Online-Ressource (12 Seiten, 184,42 KB)},
  language={ger},
  note={F{\"o}rderkennzeichen BMBF 01KU1505A. - Verbund-Nummer 01166347 ; Autoren dem Berichtsblatt entnommen. - Paralleltitel dem englischen Berichtsblatt entnommen ; Unterschiede zwischen dem gedruckten Dokument und der elektronischen Ressource k{\"o}nnen nicht ausgeschlossen werden},
  doi={10.2314/GBV:1662853432},
  keywords={Prostatakrebs / Hirntumor / Lymphom / High throughput screening / Data Mining / Differentielle Genexpression / Genom / Transkriptom / Chromatin / Histone / Molekulare Medizin},
}
@article{UBHD-68665908,
  author={Lipka, Daniel and Wang, Qi and Cabezas Wallscheid, Nina and Klimmeck, Daniel and Weichenhan, Dieter and Herrmann, Carl and Lier, Amelie and Brocks, David and Paleske, Lisa von and Renders, Simon and W{\"u}nsche, Peer and Zeisberger, Petra and Gu, Lei and Haas, Simon and Essers, Marieke Ag and Brors, Benedikt and Eils, Roland and Trumpp, Andreas and Milsom, Michael and Plass, Christoph},
  title={Identification of DNA methylation changes at cis-regulatory elements during early steps of HSC differentiation using tagmentation-based whole genome bisulfite sequencing},
  year={2014},
  pages={3476-3487},
  language={eng},
  issn={1551-4005},
  volume={13},
  number={22},
  note={Gesehen am 26.11.2020},
  journal={Cell cycle},
  doi={10.4161/15384101.2014.973334},
}
@article{UBHD-68955188,
  author={L{\"o}hr, J.-Matthias and Faißner, Ralf and Koczan, Dirk and Bewerunge, Peter and Bassi, Claudio and Brors, Benedikt and Eils, Roland and Frulloni, Luca and Funk, Anette and Halangk, Walter and Jesenofsky, Ralf and Kaderali, Lars and Kleeff, J{\"o}rg H. and Kr{\"u}ger, Burkhard and Lerch, Markus M. and L{\"o}sel, Ralf M. and Magnani, Mauro and Neumaier, Michael and Nittka, Stephanie and Sahin-Tóth, Miklós and S{\"a}nger, Julian and Serafini, Sonja and Schn{\"o}lzer, Martina and Thierse, Hermann-Josef and Wandschneider, Silke and Zamboni, Giuseppe and Kl{\"o}ppel, G{\"u}nter},
  title={Autoantibodies against the exocrine pancreas in autoimmune pancreatitis},
  subtitle={gene and protein expression profiling and immunoassays identify pancreatic enzymes as a major target of the inflammatory process},
  year={2010},
  pages={2060-2071},
  language={eng},
  issn={0002-9270},
  volume={105},
  number={9},
  journal={The American journal of gastroenterology},
}
@article{UBHD-68955497,
  author={L{\"o}hr, J.-Matthias and Faißner, Ralf and Koczan, Dirk and Bewerunge, Peter and Bassi, Claudio and Brors, Benedikt and Eils, Roland and Frulloni, Luca and Funk, Anette and Halangk, Walter and Jesenofsky, Ralf and Kaderali, Lars and Kleeff, J{\"o}rg H. and Kr{\"u}ger, Burkhard and Lerch, Markus M. and L{\"o}sel, Ralf M. and Magnani, Mauro and Neumaier, Michael and Nittka, Stephanie and Sahin-Tóth, Miklós and S{\"a}nger, Julian and Serafini, Sonja and Schn{\"o}lzer, Martina and Thierse, Hermann-Josef and Wandschneider, Silke and Zamboni, Giuseppe and Kl{\"o}ppel, G{\"u}nter},
  title={Autoantibodies against the exocrine pancreas in autoimmune pancreatitis},
  subtitle={gene and protein expression profiling and immunoassays identify pancreatic enzymes as a major target of the inflammatory process},
  year={2010},
  pages={2060-2071},
  language={eng},
  issn={1572-0241},
  volume={105},
  number={9},
  note={Gesehen am 18.08.2022},
  journal={The American journal of gastroenterology},
  doi={10.1038/ajg.2010.141},
}
@article{UBHD-69346223,
  author={Lutz, Raphael and Gr{\"u}nschl{\"a}ger, Florian and Simon, Malte and Bauer, Marcus and Awwad, Mohamed and Yousefian, Schayan and Beumer, Niklas and Jopp-Saile, Lea and Sedlmeier, Anastasia and Solé-Boldo, Llorenç and Avanesyan, Bogdan and Vonficht, Dominik and Stelmach, Patrick and Steinbuss, Georg and Boch, Tobias and Steiger, Simon and B{\"a}rtsch, Marc-Andrea and Prokoph, Nina and Rippe, Karsten and Wickenhauser, Claudia and Durie, Brian G. M. and Trumpp, Andreas and M{\"u}ller-Tidow, Carsten and H{\"u}bschmann, Daniel and Weinhold, Niels and Raab, Marc-Steffen and Brors, Benedikt and Goldschmidt, Hartmut and Imbusch, Charles and Hundemer, Michael and Haas, Simon},
  title={Multiple myeloma long-term survivors exhibit sustained immune alterations decades after first-line therapy},
  year={2024},
  pages={1-18},
  language={eng},
  issn={2041-1723},
  volume={15},
  number={Artikel-ID 10396},
  note={Gesehen am 20.05.2025},
  journal={Nature Communications},
  doi={10.1038/s41467-024-54543-0},
}
@article{UBHD-68412232,
  author={Mallm, Jan-Philipp and  ̇Iskar, Murat and Klett, Lara C. and Poos, Alexandra and Erdel, Fabian and Tavernari, Daniele and Schumacher, Sabrina and Brors, Benedikt and Lichter, Peter and Zapatka, Marc and Rippe, Karsten},
  title={Linking aberrant chromatin features in chronic lymphocytic leukemia to transcription factor networks},
  year={2019},
  pages={20 S.},
  language={eng},
  issn={1744-4292},
  volume={15(2019},
  note={Gesehen am 25.07.2019},
  journal={Molecular systems biology},
  doi={10.15252/msb.20188339},
}
@article{UBHD-68753964,
  author={Maulik, Ujjwal and Mukhopadhyay, Anirban and Bhattacharyya, Malay and Kaderali, Lars and Brors, Benedikt and Bandyopadhyay, Sanghamitra and Eils, Roland},
  title={Mining quasi-bicliques from HIV-1-human protein interaction network},
  subtitle={a multiobjective biclustering approach},
  year={2013},
  pages={423-435},
  language={eng},
  issn={1557-9964},
  volume={10},
  number={2 vom: M{\"a}rz/Apr.},
  note={Published online 28 Nov. 2012 ; Gesehen am 29.06.2021},
  journal={IEEE ACM transactions on computational biology and bioinformatics},
  doi={10.1109/TCBB.2012.139},
}
@article{UBHD-68966029,
  author={Meier, Ruth and Greve, Gabriele and Zimmer, Dennis and Bresser, Helena and Berberich, Bettina and Langova, Ralitsa and Stomper, Julia and Rubarth, Anne and Feuerbach, Lars and Lipka, Daniel and Hey, Joschka and Gr{\"u}ning, Bj{\"o}rn and Brors, Benedikt and Duyster, Justus and Plass, Christoph and Becker, Heiko and L{\"u}bbert, Michael},
  title={The antileukemic activity of decitabine upon PML/RARA-negative AML blasts is supported by all-trans retinoic acid},
  subtitle={in vitro and in vivo evidence for cooperation},
  year={2022},
  pages={1-13},
  language={eng},
  issn={2044-5385},
  volume={12},
  journal={Blood cancer journal},
  doi={10.1038/s41408-022-00715-4},
}
@article{UBHD-68563771,
  author={Mock, Andreas and Heilig, Christoph E. and Kreutzfeldt, Simon and H{\"u}bschmann, Daniel and Heining, Christoph and Schr{\"o}k, Evelin and Brors, Benedikt and Stenzinger, Albrecht and J{\"a}ger, Dirk and Schlenk, Richard Friedrich and Glimm, Hanno and Fr{\"o}hling, Stefan and Horak, Peter and Griesinger, Frank},
  title={Community-driven development of a modified progression-free survival ratio for precision oncology},
  year={2019},
  pages={6 S.},
  language={eng},
  issn={2059-7029},
  volume={4(2019) Artikel-Nummer e00058},
  number={6 Seiten},
  note={Gesehen am 14.04.2020},
  journal={ESMO open},
  doi={10.1136/esmoopen-2019-000583},
}
@article{UBHD-68430462,
  author={Mock, Andreas and Rapp, Carmen and Warta, Rolf and Abdollahi, Amir and J{\"a}ger, Dirk and Sakowitz, Oliver and Brors, Benedikt and Deimling, Andreas von and Jungk, Christine and Unterberg, Andreas and Herold-Mende, Christel},
  title={Impact of post-surgical freezing delay on brain tumor metabolomics},
  year={2019},
  pages={8 S.},
  language={eng},
  issn={1573-3890},
  volume={15(2019},
  note={Gesehen am 16.09.2019},
  journal={Metabolomics},
  doi={10.1007/s11306-019-1541-2},
}
@article{UBHD-68572779,
  author={Mock, Andreas and Warta, Rolf and Dettling, Steffen and Brors, Benedikt and J{\"a}ger, Dirk and Herold-Mende, Christel},
  title={MetaboDiff},
  subtitle={an R package for differential metabolomic analysis},
  year={2018},
  pages={3417-3418},
  language={eng},
  issn={1367-4811 and 1460-2059},
  volume={34},
  number={19},
  note={Gesehen am 04.05.2020},
  journal={Bioinformatics},
  doi={10.1093/bioinformatics/bty344},
}
@article{UBHD-68957380,
  author={M{\"o}hrmann, Lino and Werner, Maximilian and Oleś, Małgorzata and Mock, Andreas and Uhrig, Sebastian and Jahn, Arne and Kreutzfeldt, Simon and Fr{\"o}hlich, Martina and Hutter, Barbara and Paramasivam, Nagarajan and Richter, Daniela and Beck, Katja and Winter, Ulrike and Pf{\"u}tze, Katrin and Heilig, Christoph E. and Teleanu, Maria-Veronica and Lipka, Daniel and Zapatka, Marc and Hanf, Dorothea and List, Catrin and Allg{\"a}uer, Michael and Penzel, Roland and R{\"u}ter, Gina and Jelas, Ivan and Hamacher, Rainer W. and Falkenhorst, Johanna and Wagner, Sebastian and Brandts, Christian H. and B{\"o}rries, Melanie and Illert, Anna Lena and Metzeler, Klaus H. and Westphalen, C. Benedikt and Desuki, Alexander and Kindler, Thomas and Folprecht, Gunnar and Weichert, Wilko and Brors, Benedikt and Stenzinger, Albrecht and Schr{\"o}ck, Evelin and H{\"u}bschmann, Daniel and Horak, Peter and Heining, Christoph and Fr{\"o}hling, Stefan and Glimm, Hanno},
  title={Comprehensive genomic and epigenomic analysis in cancer of unknown primary guides molecularly-informed therapies despite heterogeneity},
  year={2022},
  pages={1-15},
  language={eng},
  issn={2041-1723},
  volume={13},
  number={Artikel-ID 4485},
  note={Gesehen am 25.08.2022},
  journal={Nature Communications},
  doi={10.1038/s41467-022-31866-4},
}
@article{UBHD-68465377,
  author={M{\"u}hlenberg, Thomas Eike Markus and Ketzer, Julia and Heinrich, Michael C. and Grunewald, Susanne and Marino-Enriquez, Adrian and Trautmann, Marcel and Hartmann, Wolfgang and Wardelmann, Eva and Treckmann, J{\"u}rgen and Worm, Karl and Bertram, Stefanie and Herold, Thomas and Schildhaus, Hans-Ulrich and Glimm, Hanno and Stenzinger, Albrecht and Brors, Benedikt and Horak, Peter and Hohenberger, Peter and Fr{\"o}hling, Stefan and Fletcher, Jonathan A. and Bauer, Sebastian},
  title={KIT-dependent and KIT-independent genomic heterogeneity of resistance in gastrointestinal stromal tumors},
  subtitle={TORC1/2 inhibition as salvage strategy},
  year={2019},
  pages={1985-1996},
  language={eng},
  issn={1538-8514},
  volume={18},
  number={11},
  note={Gesehen am 09.12.2019},
  journal={Molecular cancer therapeutics},
  doi={10.1158/1535-7163.MCT-18-1224},
}
@article{UBHD-68254461,
  author={Northcott, Paul A. and Paramasivam, Nagarajan and Heinold, Michael and H{\"u}bschmann, Daniel and Herold-Mende, Christel and Witt, Olaf and Milde, Till and Deimling, Andreas von and Capper, David and Brors, Benedikt and Eils, Roland},
  title={The whole-genome landscape of medulloblastoma subtypes},
  year={2017},
  pages={311-317},
  language={eng},
  issn={1476-4687},
  volume={547},
  number={7663},
  note={Das PDF enth{\"a}lt abweichend von der Seitenangabe 20 Seiten, incl. Anhang ; Gesehen am 24.05.2018},
  journal={Nature},
  doi={10.1038/nature22973},
}
@article{UBHD-69079843,
  author={Oberth{\"u}r, Carl André and Juraeva, D. and Li, L. and Kahlert, Y. and Westermann, Frank and Eils, Roland and Berthold, F. and Shi, L. and Wolfinger, R. D. and Fischer, M. and Brors, Benedikt},
  title={Comparison of performance of one-color and two-color gene-expression analyses in predicting clinical endpoints of neuroblastoma patients},
  year={2010},
  pages={258-266},
  language={eng},
  issn={1473-1150},
  volume={10},
  number={4},
  note={Gesehen am 26.05.2023},
  journal={The pharmacogenomics journal},
  doi={10.1038/tpj.2010.53},
}
@article{UBHD-68587904,
  author={Oberth{\"u}r, Carl André and Juraeva, Dilafruz and Eils, Roland and Westermann, Frank and Brors, Benedikt},
  title={Revised risk estimation and treatment stratification of low- and intermediate-risk neuroblastoma patients by integrating clinical and molecular prognostic markers},
  year={2015},
  pages={1904-1915},
  language={eng},
  issn={1557-3265},
  volume={21},
  number={8},
  note={Published online first September 17, 2014 ; Gesehen am 17.06.2020},
  journal={Clinical cancer research},
  doi={10.1158/1078-0432.CCR-14-0817},
}
@article{UBHD-68975741,
  author={Oumeraci, Tonio and Schmidt, Bernd and Wolf, Thomas and Zapatka, Marc and Pich, Andreas and Brors, Benedikt and Eils, Roland and Fleischhacker, Michael and Schlegelberger, Brigitte and Neuhoff, Nils v.},
  title={Bronchoalveolar lavage fluid of lung cancer patients},
  subtitle={mapping the uncharted waters using proteomics technology},
  year={2011},
  pages={136-138},
  language={eng},
  issn={1872-8332},
  volume={72},
  number={1 vom: Apr.},
  note={Letters to the editor ; Gesehen am 19.10.2022},
  journal={Lung cancer},
  doi={10.1016/j.lungcan.2011.01.015},
}
@article{UBHD-68568600,
  author={Perera-Bel, Júlia and Hutter, Barbara and Heining, Christoph and Fr{\"o}hlich, Martina and Fr{\"o}hling, Stefan and Glimm, Hanno and Brors, Benedikt},
  title={From somatic variants towards precision oncology},
  subtitle={evidence-driven reporting of treatment options in molecular tumor boards},
  year={2018},
  pages={15 S.},
  language={eng},
  issn={1756-994X},
  volume={10(2018) Artikel-Nummer 18},
  number={15 Seiten},
  note={Gesehen am 21.04.2020},
  journal={Genome medicine},
  doi={10.1186/s13073-018-0529-2},
}
@article{UBHD-68298578,
  author={Pfaff, Elke and Keßler, Tobias and Balasubramanian, Gnana Prakash and Berberich, Anne and Schrimpf, Daniel and Wick, Antje and Debus, J{\"u}rgen and Unterberg, Andreas and Bendszus, Martin and Herold-Mende, Christel and Eisenmenger, Andreas and Dettmer, Susan and Brors, Benedikt and Platten, Michael and Pfister, Stefan and Deimling, Andreas von and Jones, David T. W. and Wick, Wolfgang and Sahm, Felix},
  title={Feasibility of real-time molecular profiling for patients with newly diagnosed glioblastoma without MGMT promoter hypermethylation},
  subtitle={the NCT Neuro Master Match (N2M2) pilot study},
  year={2018},
  pages={826-837},
  language={eng},
  issn={1523-5866},
  volume={20},
  number={6},
  note={Gesehen am 23.08.2018 ; Published: 18 November 2017},
  journal={Neuro-Oncology},
  doi={10.1093/neuonc/nox216},
}
@article{UBHD-68804876,
  author={Pinto, Sheena Dominique and Michel, Chloé and Schmidt-Glenewinkel, Hannah and Harder, Nathalie and Rohr, Karl and Wild, Stefan and Brors, Benedikt and Kyewski, Bruno},
  title={Overlapping gene coexpression patterns in human medullary thymic epithelial cells generate self-antigen diversity},
  year={2013},
  pages={E3497-E3505},
  language={eng},
  issn={1091-6490},
  volume={110},
  number={37},
  note={Gesehen am 24.11.2021},
  journal={Proceedings of the National Academy of Sciences of the United States of America},
  doi={10.1073/pnas.1308311110},
}
@book{UBHD-69316526,
  author={Jungkunz, Martin and Cornelius, Kai and Schickhardt, Christoph and Dikow, Nicola and Winkler, Eva C. and Brors, Benedikt and Fr{\"o}hling, Stefan and Greulich-Bode, Karin Maria and Idler, Irina and Lichter, Peter and Milde, Till and Pfister, Stefan and Schaaf, Christian P. and Wiemann, Stefan},
  organization={Projektgruppe EURAT},
  title={Stellungnahme zur R{\"u}ckmeldung genetischer Zusatzbefunde Minderj{\"a}hriger},
  subtitle={Heidelberg, Oktober 2023},
  publisher={Sektion f{\"u}r Translationale Medizinethik},
  address={Heidelberg},
  year={2023},
  pages={130 Seiten},
  language={ger},
}
@article{UBHD-68936577,
  author={Radke, Josefine and Ishaque, Naveed and Koll, Randi and Gu, Zuguang and Schumann, Elisa and Sieverling, Lina and Uhrig, Sebastian and H{\"u}bschmann, Daniel and Toprak, Umut and López, Cristina and Hostench, Xavier Pastor and Borgoni, Simone and Juraeva, Dilafruz and Pritsch, Fabienne and Paramasivam, Nagarajan and Balasubramanian, Gnana Prakash and Schlesner, Matthias and Sahay, Shashwat and Weniger, Marc and Pehl, Debora and Radbruch, Helena and Osterloh, Anja and Korfel, Agnieszka and Misch, Martin and Onken, Julia and Faust, Katharina and Vajkoczy, Peter and Moskopp, Dag and Wang, Yawen and J{\"o}dicke, Andreas and Tr{\"u}mper, Lorenz and Anagnostopoulos, Ioannis and Lenze, Dido and K{\"u}ppers, Ralf and Hummel, Michael and Schmitt, Clemens Alexander and Wiestler, Otmar D. and Wolf, Stephan and Unterberg, Andreas and Eils, Roland and Herold-Mende, Christel and Brors, Benedikt and Siebert, Reiner and Wiemann, Stefan and Heppner, Frank L. and Lichter, Peter and Radlwimmer, Bernhard},
  title={The genomic and transcriptional landscape of primary central nervous system lymphoma},
  year={2022},
  pages={1-20},
  language={eng},
  issn={2041-1723},
  volume={13},
  number={Artikel-ID 2558},
  note={Gesehen am 01.07.2022},
  journal={Nature Communications},
  doi={10.1038/s41467-022-30050-y},
}
@article{UBHD-68587720,
  author={Rattay, Kristin and Meyer, Hannah V. and Herrmann, Carl and Brors, Benedikt and Kyewski, Bruno},
  title={Evolutionary conserved gene co-expression drives generation of self-antigen diversity in medullary thymic epithelial cells},
  year={2016},
  pages={65-75},
  language={eng},
  issn={1095-9157},
  volume={67},
  note={Available online 23 October 2015 ; Gesehen am 17.06.2020},
  journal={Journal of autoimmunity},
  doi={10.1016/j.jaut.2015.10.001},
}
@article{UBHD-68251412,
  author={Reis, Yara and Bernardo Faura, Martí and Richter, Daniela and Wolf, Thomas and Brors, Benedikt and Hamacher-Brady, Anne and Eils, Roland and Brady, Nathan},
  title={Multi-parametric analysis and modeling of relationships between mitochondrial morphology and apoptosis},
  year={2012},
  language={eng},
  issn={1932-6203},
  volume={7(2012},
  note={Gesehen am 11.05.2018},
  journal={PLOS ONE},
  doi={10.1371/journal.pone.0028694},
}
@article{UBHD-68863261,
  author={Renner, Marcus and Wolf, Thomas and Meyer, Hannah V. and Hartmann, Wolfgang and Penzel, Roland and Ulrich, Alexis and Lehner, Burkhard and Hovestadt, Volker and Czwan, Esteban and Egerer, Gerlinde and Schmitt, Thomas and Alldinger, Ingo and Renker, Eva Kristin and Ehemann, Volker and Eils, Roland and Wardelmann, Eva and B{\"u}ttner, Reinhard and Lichter, Peter and Brors, Benedikt and Schirmacher, Peter and Mechtersheimer, Gunhild},
  title={Integrative DNA methylation and gene expression analysis in high-grade soft tissue sarcomas},
  year={2013},
  pages={1-26},
  language={eng},
  issn={1474-760X},
  volume={14},
  note={Gesehen am 07.01.2022},
  journal={Genome biology},
  doi={10.1186/gb-2013-14-12-r137},
}
@article{UBHD-68864217,
  author={Rieber, Nora and Zapatka, Marc and Lasitschka, B{\"a}rbel and Jones, David T. W. and Northcott, Paul and Hutter, Barbara and J{\"a}ger, Natalie and Kool, Marcel and Taylor, Michael and Lichter, Peter and Pfister, Stefan and Wolf, Stephan and Brors, Benedikt and Eils, Roland},
  title={Coverage bias and sensitivity of variant calling for four whole-genome sequencing technologies},
  year={2013},
  pages={1-11},
  language={eng},
  issn={1932-6203},
  volume={8},
  note={Gesehen am 11.01.2022},
  journal={PLOS ONE},
  doi={10.1371/journal.pone.0066621},
}
@article{UBHD-69057686,
  author={Riegel, Dania and Romero-Fernández, Elena and Simon, Malte and Adenugba, Akinbami Raphael and Singer, Katrin and Mayr, Roman and Weber, Florian and Kleemann, Mark and Imbusch, Charles and Kreutz, Marina and Brors, Benedikt and Ugele, Ines and Werner, Jens M. and Siska, Peter J. and Schmidl, Christian},
  title={Integrated single-cell profiling dissects cell-state-specific enhancer landscapes of human tumor-infiltrating CD8+ T cells},
  year={2023},
  pages={622-636.e10},
  language={eng},
  issn={1097-4164},
  volume={83},
  number={4 vom: Feb.},
  note={Online verf{\"u}gbar 18. Januar 2023, Artikelversion 16. Februar 2023 ; Gesehen am 29.03.2023 ; Im Titel ist das Pluszeichen hochgestellt},
  journal={Molecular cell},
  doi={10.1016/j.molcel.2022.12.029},
}
@article{UBHD-69077070,
  author={Riehl, Astrid and Bauer, Tobias Hartmut and Brors, Benedikt and Busch, Hauke and Mark, Regina and Németh, Julia and Gebhardt, Christoffer and Bierhaus, Angelika and Nawroth, Peter Paul and Eils, Roland and K{\"o}nig, Rainer and Angel, Peter and Heß, Jochen},
  title={Identification of the Rage-dependent gene regulatory network in a mouse model of skin inflammation},
  year={2010},
  pages={1-13},
  language={eng},
  issn={1471-2164},
  volume={11},
  number={Artikel-ID 537},
  note={Gesehen am 17.05.2023},
  journal={BMC genomics},
  doi={10.1186/1471-2164-11-537},
}
@article{UBHD-69003753,
  author={Rieke, Damian and de Bortoli, Till and Horak, Peter and Lamping, Mario and Benary, Manuela and Jelas, Ivan and R{\"u}ter, Gina and Berger, Johannes and Zettwitz, Marit and Kagelmann, Niklas and Kind, Andreas and Fabian, Falk and Beule, Dieter and Glimm, Hanno and Brors, Benedikt and Stenzinger, Albrecht and Fr{\"o}hling, Stefan and Keilholz, Ulrich},
  title={Feasibility and outcome of reproducible clinical interpretation of high-dimensional molecular data},
  subtitle={a comparison of two molecular tumor boards},
  year={2022},
  pages={1-11},
  language={eng},
  issn={1741-7015},
  volume={20},
  number={Artikel-ID 367},
  note={Gesehen am 10.01.2023},
  journal={BMC medicine},
  doi={10.1186/s12916-022-02560-5},
}
@article{UBHD-69078855,
  author={Rietschel, Marcella and Mattheisen, Manuel and Frank, Josef and Treutlein, Jens and Degenhardt, Franziska and Breuer, René and Steffens, Michael and Mier, Daniela and Esslinger, Christine and Walter, Henrik and Kirsch, Peter and Erk, Susanne and Schnell, Knut and Herms, Stefan and Wichmann, H. -Erich and Schreiber, Stefan and J{\"o}ckel, Karl-Heinz and Strohmaier, Jana and Roeske, Darina and Haenisch, Britta and Gross, Magdalena and Hoefels, Susanne and Lucae, Susanne and Binder, Elisabeth B. and Wienker, Thomas F. and Schulze, Thomas G. and Schm{\"a}l, Christine and Zimmer, Andreas and Juraeva, Dilafruz and Brors, Benedikt and Bettecken, Thomas and Meyer-Lindenberg, Andreas and M{\"u}ller-Myhsok, Bertram and Maier, Wolfgang and N{\"o}then, Markus M. and Cichon, Sven},
  title={Genome-wide association-, replication-, and neuroimaging study implicates HOMER1 in the etiology of major depression},
  year={2010},
  pages={578-585},
  language={eng},
  issn={1873-2402},
  volume={68},
  number={6},
  note={Gesehen am 24.05.2023},
  journal={Biological psychiatry},
  doi={10.1016/j.biopsych.2010.05.038},
}
@book{UBHD-68594469,
  author={Rippe, Karsten and Lichter, Peter and Plass, Christoph and H{\"o}fer, Thomas and Brors, Benedikt and Eils, Roland},
  organization={Deutsches Krebsforschungszentrum},
  title={Schlussbericht zum Teilprojekt A im CancerSys - Verbundprojekt "CancerEpiSys - Integrative Analyse epigenetischer Netzwerke bei chronisch lymphatischer Leuk{\"a}mie"},
  subtitle={Laufzeit des Vorhabens: 1. 3. 2012-28. 2. 2015, mit zuwendungsneutraler Verl{\"a}ngerung bis zum 31. 8. 2015},
  publisher={Deutsches Krebsforschungszentrum},
  address={Heidelberg},
  year={2016},
  pages={31 Bl{\"a}tter, 1 ungez{\"a}hltes Blatt},
  language={ger},
  note={F{\"o}rderkennzeichen BMBF 0316049A. - Verbund-Nummer 01100465 ; Autoren dem Berichtsblatt entnommen ; Unterschiede zwischen dem gedruckten Dokument und der elektronischen Ressource k{\"o}nnen nicht ausgeschlossen werden ; "Durchf{\"u}hrende Institution(en): Deutsches Krebsforschungszentrum (DKFZ): Rippe: Genomorganisation und Funktion - B066, Lichter: Molekulare Genetik - B060, Plass: Epigenomik und Krebsrisikofaktoren - C010, H{\"o}fer: Theoretische Systembiologie - B086, Brors/Eils: Theoretische Bioinformatik - B080" - Berichtsblatt},
  keywords={Chronisch-lymphatische Leuk{\"a}mie / Genregulation / Systembiologie / Mathematische Modellierung},
}
@book{UBHD-68594473,
  author={Rippe, Karsten and Lichter, Peter and Plass, Christoph and H{\"o}fer, Thomas and Brors, Benedikt and Eils, Roland},
  organization={Deutsches Krebsforschungszentrum},
  title={Schlussbericht zum Teilprojekt A im CancerSys - Verbundprojekt "CancerEpiSys - Integrative Analyse epigenetischer Netzwerke bei chronisch lymphatischer Leuk{\"a}mie"},
  subtitle={Laufzeit des Vorhabens: 1. 3. 2012-28. 2. 2015, mit zuwendungsneutraler Verl{\"a}ngerung bis zum 31. 8. 2015},
  publisher={Deutsches Krebsforschungszentrum},
  address={Heidelberg},
  year={2016},
  pages={1 Online-Ressource (32 Seiten, 355,95 KB)},
  language={ger},
  note={F{\"o}rderkennzeichen BMBF 0316049A. - Verbund-Nummer 01100465 ; Autoren dem Berichtsblatt entnommen ; Unterschiede zwischen dem gedruckten Dokument und der elektronischen Ressource k{\"o}nnen nicht ausgeschlossen werden ; "Durchf{\"u}hrende Institution(en): Deutsches Krebsforschungszentrum (DKFZ): Rippe: Genomorganisation und Funktion - B066, Lichter: Molekulare Genetik - B060, Plass: Epigenomik und Krebsrisikofaktoren - C010, H{\"o}fer: Theoretische Systembiologie - B086, Brors/Eils: Theoretische Bioinformatik - B080" - Berichtsblatt},
  doi={10.2314/GBV:870579649},
  keywords={Chronisch-lymphatische Leuk{\"a}mie / Genregulation / Systembiologie / Mathematische Modellierung},
}
@article{UBHD-68563945,
  author={Rodríguez Paredes, Manuel and Lucena Porcel, Carlota and Feuerbach, Lars and Brors, Benedikt and Herpel, Esther and Hofmann, Thomas G. and Lyko, Frank},
  title={Methylation profiling identifies two subclasses of squamous cell carcinoma related to distinct cells of origin},
  year={2018},
  pages={1-9},
  language={eng},
  issn={2041-1723},
  volume={9},
  number={Artikel-ID 577},
  note={Gesehen am 14.04.2020},
  journal={Nature Communications},
  doi={10.1038/s41467-018-03025-1},
}
@article{UBHD-68676883,
  author={Roider, Tobias and Seufert, Julian and Uvarovskii, Alexey and Frauhammer, Felix and Bordas, Marie and Abedpour, Nima and Stolarczyk, Marta and Mallm, Jan-Philipp and Herbst, Sophie A. and Bruch, Peter-Martin and Balke-Want, Hyatt and Hundemer, Michael and Rippe, Karsten and Goeppert, Benjamin and Seiffert, Martina and Brors, Benedikt and Mechtersheimer, Gunhild and Zenz, Thorsten and Peifer, Martin and Chapuy, Bj{\"o}rn and Schlesner, Matthias and M{\"u}ller-Tidow, Carsten and Fr{\"o}hling, Stefan and Huber, Wolfgang and Anders, Simon and Dietrich, Sascha},
  title={Dissecting intratumour heterogeneity of nodal B-cell lymphomas at the transcriptional, genetic and drug-response levels},
  year={2020},
  pages={896-906},
  language={eng},
  issn={1476-4679},
  volume={22},
  number={7},
  note={Gesehen am 05.01.2021},
  journal={Nature cell biology},
  doi={10.1038/s41556-020-0532-x},
}
@book{UBHD-68561947,
  author={Roider, Tobias and Seufert, Julian and Uvarovskii, Alexey and Frauhammer, Felix and Bordas, Marie and Abedpour, Nima and Stolarczyk, Marta and Mallm, Jan-Philipp and Herbst, Sophie A. and Bruch, Peter-Martin and Balke-Want, Hyatt and Hundemer, Michael and Rippe, Karsten and Goeppert, Benjamin and Seiffert, Martina and Brors, Benedikt and Mechtersheimer, Gunhild and Zenz, Thorsten and Peifer, Martin and Chapuy, Bj{\"o}rn and Schlesner, Matthias and M{\"u}ller-Tidow, Carsten and Fr{\"o}hling, Stefan and Huber, Wolfgang and Anders, Simon and Dietrich, Sascha},
  title={Dissecting intratumor heterogeneity of nodal B cell lymphomas at transcriptional, genetic, and drug response levels},
  publisher={Universit{\"a}t},
  address={Heidelberg},
  year={2020},
  pages={1 Online-Ressource (15 Files)},
  language={eng},
  note={Gesehen am 06.04.2020},
  doi={10.11588/data/VRJUNV},
  url={https://doi.org/10.11588/data/VRJUNV},
  library={UB},
}
@article{UBHD-68495264,
  author={Ronellenfitsch, Michael Wilfried and Harter, Patrick N. and Kirchner, Martina and Heining, Christoph and Hutter, Barbara and Gieldon, Laura and Schittenhelm, Jens Florian and Schuhmann, Martin U. and Tatagiba, Marcos and Marquardt, Gerhard and Wagner, Marlies and Endris, Volker and Brandts, Christian H. and Mautner, Victor-Felix and Schr{\"o}ck, Evelin and Weichert, Wilko and Brors, Benedikt and Deimling, Andreas von and Mittelbronn, Michel and Steinbach, Joachim P. and Reuss, David and Glimm, Hanno and Stenzinger, Albrecht and Fr{\"o}hling, Stefan},
  title={Targetable ERBB2 mutations identified in neurofibroma/schwannoma hybrid nerve sheath tumors},
  year={2020},
  pages={2488-2495},
  language={eng},
  issn={1558-8238},
  volume={130},
  number={5},
  note={First published February 4, 2020 ; Gesehen am 02.032020},
  journal={The journal of clinical investigation},
  doi={10.1172/JCI130787},
}
@article{UBHD-68615315,
  author={R{\"u}ßeler, Anna Vanessa and Brors, Benedikt and Fischer, Thomas and Hartmann, J{\"o}rg Thomas and Hartmann, Wolfgang and Hohenberger, Peter and Lichter, Peter and Marx, Alexander and Mechtersheimer, Gunhild and Penzel, Roland and Renner, Marcus and Schildhaus, Hans-Ulrich and Schirmacher, Peter and Sievers, Elisabeth and Str{\"o}bel, Philipp and Wardelmann, Eva and Ziesché, Elisabeth and B{\"u}ttner, Reinhard},
  title={Molekularpathologie von Sarkomen},
  subtitle={erste Ergebnisse des Sarkomforschungsverbundes KoSar},
  year={2010},
  pages={211-214},
  language={ger},
  issn={1432-1963},
  volume={31},
  number={Supplement 2},
  note={Gesehen am 09.07.2020},
  journal={Der Pathologe},
  doi={10.1007/s00292-010-1340-z},
}
@article{UBHD-68614948,
  author={R{\"u}ßeler, Anna Vanessa and Brors, Benedikt and Fischer, Thomas and Hartmann, J{\"o}rg Thomas and Hartmann, Wolfgang and Hohenberger, Peter and Lichter, Peter and Marx, Alexander and Mechtersheimer, Gunhild and Penzel, Roland and Renner, Marcus and Schildhaus, Hans-Ulrich and Schirmacher, Peter and Sievers, Elisabeth and Str{\"o}bel, Philipp and Wardelmann, Eva and Ziesché, Elisabeth and B{\"u}ttner, Reinhard},
  title={Molekularpathologie von Sarkomen: Erste Ergebnisse des Sarkomforschungsverbundes KoSar},
  year={2010},
  pages={211-214},
  language={ger},
  issn={0172-8113},
  volume={Bd. 31.2010},
  number={Suppl.2},
  journal={Der Pathologe},
}
@article{UBHD-68671426,
  author={Scherr, Anna-Lena and Mock, Andreas and Gdynia, Georg and Schmitt, Nathalie and Heilig, Christoph E. and Korell, Felix and Rhadakrishnan, Praveen and Hoffmeister-Wittmann, Paula and Metzeler, Klaus H. and Schulze-Osthoff, Klaus and Illert, Anna Lena and B{\"o}rries, Melanie and Trojan, J{\"o}rg and Waidmann, Oliver and Falkenhorst, Johanna and Siveke, Jens and Jost, Philipp J. and Bitzer, Michael and Malek, Nisar P. and Vecchione, Loredana and Jelas, Ivan and Brors, Benedikt and Glimm, Hanno and Stenzinger, Albrecht and Grekova, Svetlana and Gehrig, Tobias and Schulze-Bergkamen, Henning and J{\"a}ger, Dirk and Schirmacher, Peter and Heikenwalder, Mathias and Goeppert, Benjamin and Schneider, Martin and Fr{\"o}hling, Stefan and K{\"o}hler, Bruno Christian},
  title={Identification of BCL-XL as highly active survival factor and promising therapeutic target in colorectal cancer},
  year={2020},
  pages={1-16},
  language={eng},
  issn={2041-4889},
  volume={11},
  number={10},
  note={Gesehen am 10.12.2020},
  journal={Cell death & disease},
  doi={10.1038/s41419-020-03092-7},
  url={https://doi.org/10.1038/s41419-020-03092-7},
  library={UB},
}
@article{UBHD-69084882,
  author={Schmid, Ramona and Baum, Patrick and Ittrich, Carina and Fundel-Clemens, Katrin and Huber, Wolfgang and Brors, Benedikt and Eils, Roland and Weith, Andreas and Mennerich, Detlev and Quast, Karsten},
  title={Comparison of normalization methods for Illumina BeadChip HumanHT-12 v3},
  year={2010},
  pages={1-17},
  language={eng},
  issn={1471-2164},
  volume={11},
  number={Artikel-ID 349},
  note={Gesehen am 13.06.2023},
  journal={BMC genomics},
  doi={10.1186/1471-2164-11-349},
}
@article{UBHD-68560523,
  author={Sieverling, Lina Katharine and Hong, Chen and Koser, Sandra D. and Ginsbach, Philip and Kleinheinz, Kortine and Hutter, Barbara and Braun, Delia and Cortés-Ciriano, Isidro and Xi, Ruibin and Kabbe, Rolf and Park, Peter J. and Eils, Roland and Schlesner, Matthias and Brors, Benedikt and Rippe, Karsten and Jones, David T. W. and Feuerbach, Lars},
  title={Genomic footprints of activated telomere maintenance mechanisms in cancer},
  year={2020},
  pages={13 S.},
  language={eng},
  issn={2041-1723},
  volume={11(2020) Artikel-Nummer 733},
  number={13 Seiten},
  note={Gesehen am 02.04.2020},
  journal={Nature Communications},
  doi={10.1038/s41467-019-13824-9},
}
@article{UBHD-68967419,
  author={Simon, Malte and Mughal, Sadaf Shabbir and Horak, Peter and Uhrig, Sebastian and Buchloh, Jonas and Aybey, Bogac and Stenzinger, Albrecht and Glimm, Hanno and Fr{\"o}hling, Stefan and Brors, Benedikt and Imbusch, Charles},
  title={Correction to: Deconvolution of sarcoma methylomes reveals varying degrees of immune cell infiltrates with association to genomic aberrations},
  year={2022},
  pages={1},
  language={eng},
  issn={1479-5876},
  volume={20},
  number={Artikel-ID 152},
  note={Published online 02 April 2022 ; Gesehen am 26.09.2022},
  journal={Journal of translational medicine},
  doi={10.1186/s12967-022-03316-8},
}
@article{UBHD-68761656,
  author={Simon, Malte and Mughal, Sadaf Shabbir and Horak, Peter and Uhrig, Sebastian and Buchloh, Jonas and Aybey, Bogac and Stenzinger, Albrecht and Glimm, Hanno and Fr{\"o}hling, Stefan and Brors, Benedikt and Imbusch, Charles},
  title={Deconvolution of sarcoma methylomes reveals varying degrees of immune cell infiltrates with association to genomic aberrations},
  year={2021},
  pages={1-17},
  language={eng},
  issn={1479-5876},
  volume={19},
  number={Artikel-ID 204},
  note={Gesehen am 20.07.2021},
  journal={Journal of translational medicine},
  doi={10.1186/s12967-021-02858-7},
}
@article{UBHD-69367013,
  author={Simon, Malte and St{\"u}ve, Philipp and Schmidleithner, Lisa and Bittner, Sebastian and Beumer, Niklas and Strieder, Nicholas and Schmidl, Christian and Pant, Asmita and Gebhard, Claudia and Eigenberger, Andreas and Rehli, Michael and Prantl, Lukas and Hehlgans, Thomas and Brors, Benedikt and Imbusch, Charles and Delacher, Michael and Feuerer, Markus},
  title={Single-cell chromatin accessibility and transposable element landscapes reveal shared features of tissue-residing immune cells},
  year={2024},
  pages={1975-1993.e10},
  language={eng},
  issn={1097-4180},
  volume={57},
  number={8 vom: Aug.},
  note={Online verf{\"u}gbar: 23. Juli 2024, Artikelversion: 13. August 2024 ; Gesehen am 18.07.2025},
  journal={Immunity},
  doi={10.1016/j.immuni.2024.06.015},
}
@article{UBHD-68873903,
  author={Skorokhod, Alexander and Helmbold, Peter and Brors, Benedikt and Schirmacher, Peter and Enk, Alexander and Penzel, Roland},
  title={Automated universal BRAF state detection within the activation segment in skin metastases by pyrosequencing-based assay U-BRAFV600},
  year={2013},
  pages={1-10},
  language={eng},
  issn={1932-6203},
  volume={8},
  note={Im Text ist "V600" hochgestellt ; Published: March 26, 2013 ; Gesehen am 03.02.2022},
  journal={PLOS ONE},
  doi={10.1371/journal.pone.0059221},
}
@article{UBHD-68704401,
  author={Stainczyk, Sabine and Sieverling, Lina and Nadler-Holly, Michal and Ziehm, Matthias and Toprak, Umut H. and Herrmann, Carl and Ishaque, Naveed and Okonechnikov, Konstantin and Gartlgruber, Moritz and Park, Young-Gyu and Wecht, Elisa Maria and Savelyeva, Larissa and Henrich, Kai-Oliver and Rosswog, Carolina and Fischer, Matthias and Hero, Barbara and Jones, David T. W. and Pfaff, Elke and Witt, Olaf and Pfister, Stefan and Volckmann, Richard and Koster, Jan and Kiesel, Katharina and Rippe, Karsten and Taschner-Mandl, Sabine and Ambros, Peter and Brors, Benedikt and Selbach, Matthias and Feuerbach, Lars and Westermann, Frank},
  title={Alternative lengthening of telomeres in childhood neuroblastoma from genome to proteome},
  year={2021},
  pages={1-18},
  language={eng},
  issn={2041-1723},
  volume={12},
  number={Artikel-ID 1269},
  note={Gesehen am 26.02.2021},
  journal={Nature Communications},
  doi={10.1038/s41467-021-21247-8},
}
@article{UBHD-68403987,
  author={Tomska, Katarzyna and Kurilov, Roman and Lee, Kwang Seok and H{\"u}llein, Jennifer and Lukas, Marina and Sellner, Leopold and Walther, Tatjana and Wagner, Lena and Oleś, Małgorzata and Brors, Benedikt and Huber, Wolfgang and Zenz, Thorsten},
  title={Drug-based perturbation screen uncovers synergistic drug combinations in Burkitt lymphoma},
  year={2018},
  pages={12 S.},
  language={eng},
  issn={2045-2322},
  volume={8(2018) Artikel-Nummer 12046},
  note={Gesehen am 03.07.2019},
  journal={Scientific reports},
  doi={10.1038/s41598-018-30509-3},
}
@article{UBHD-68647801,
  author={Voronina, Natalia and Wong, John K. L. and H{\"u}bschmann, Daniel and Hlevnjak, Mario and Uhrig, Sebastian and Heilig, Christoph E. and Horak, Peter and Kreutzfeldt, Simon and Mock, Andreas and Stenzinger, Albrecht and Hutter, Barbara and Fr{\"o}hlich, Martina and Brors, Benedikt and Jahn, Arne and Klink, Barbara and Gieldon, Laura and Sieverling, Lina Katharine and Feuerbach, Lars and Chudasama, Priya and Beck, Katja and Kroiss, Matthias and Heining, Christoph and M{\"o}hrmann, Lino and Fischer, Andrea and Schr{\"o}ck, Evelin and Glimm, Hanno and Zapatka, Marc and Lichter, Peter and Fr{\"o}hling, Stefan and Ernst, Aurélie},
  title={The landscape of chromothripsis across adult cancer types},
  year={2020},
  pages={13 S.},
  language={eng},
  issn={2041-1723},
  volume={11(2020) Artikel-Nummer 2320},
  number={13 Seiten},
  note={Gesehen am 13.10.2020},
  journal={Nature Communications},
  doi={10.1038/s41467-020-16134-7},
}
@article{UBHD-68642373,
  author={Wahjudi, Leonie and Bernhardt, Stephan and Abnaof, Khalid and Horak, Peter and Kreutzfeldt, Simon and Heining, Christoph and Borgoni, Simone and Becki, Corinna and Berg, Daniela and Richter, Daniela and Hutter, Barbara and Uhrig, Sebastian and Pf{\"u}tze, Katrin and Leichsenring, Jonas and Glimm, Hanno and Brors, Benedikt and Kalle, Christof von and Stenzinger, Albrecht and Korf, Ulrike and Fr{\"o}hling, Stefan and Wiemann, Stefan},
  title={Integrating proteomics into precision oncology},
  year={2021},
  pages={1438-1451},
  language={eng},
  issn={1097-0215},
  volume={148},
  number={6},
  note={First published: 19 September 2020 ; Gesehen am 02.10.2020},
  journal={International journal of cancer},
  doi={10.1002/ijc.33301},
}
@article{UBHD-68933393,
  author={Wahler, Theodora and Gretz, Norbert and Gr{\"o}ne, Hermann-Josef and Kenzelmann, Marc and Eils, Roland and Brors, Benedikt},
  title={Group testing for pathway analysis improves comparability of different microarray datasets},
  year={2006},
  pages={10$p2500-2506$t7},
  language={eng},
  issn={1367-4811},
  volume={22},
  number={20},
  note={Advance access publication: August 7, 2006 ; Gesehen am 22.06.2022},
  journal={Bioinformatics},
  doi={10.1093/bioinformatics/btl424},
}
@incollection{UBHD-68569846,
  author={Weichenhan, Dieter and Imbusch, Charles and Wang, Qi and Brors, Benedikt and Plass, Christoph},
  title={Generation of whole genome bisulfite sequencing libraries from very low DNA input},
  year={2019},
  pages={229-248},
  language={eng},
  isbn={978-1-4939-9151-8},
  note={Gesehen am 23.04.2020},
  booktitle={Lymphoma},
  editor={K{\"u}ppers, Ralf},
  doi={10.1007/978-1-4939-9151-8_10},
}
@article{UBHD-68578637,
  author={Weinberg, Florian and Griffin, Ricarda and Fr{\"o}hlich, Martina and Heining, Christoph and Braun, Sandra Daniela and Spohr, Corinna and Iconomou, Mary and Hollek, Viola and R{\"o}ring, Michael and Horak, Peter and Kreutzfeldt, Simon and Warsow, Gregor and Hutter, Barbara and Uhrig, Sebastian and Neumann, Olaf and Reuss, David and Heiland, Dieter Henrik and Kalle, Christof von and Weichert, Wilko and Stenzinger, Albrecht and Brors, Benedikt and Glimm, Hanno and Fr{\"o}hling, Stefan and Brummer, Tilman},
  title={Identification and characterization of a BRAF fusion oncoprotein with retained autoinhibitory domains},
  year={2020},
  pages={814-832},
  language={eng},
  issn={1476-5594},
  volume={39},
  number={4},
  note={Published: 26 September 2019 ; Gesehen am 18.05.2020},
  journal={Oncogene},
  doi={10.1038/s41388-019-1021-1},
}
@article{UBHD-68794519,
  author={Weischenfeldt, Joachim and Simon, Ronald and Feuerbach, Lars and Schlangen, Karin and Weichenhan, Dieter and Minner, Sarah and Wuttig, Daniela and Warnatz, Hans-J{\"o}rg and Stehr, Henning and Rausch, Tobias and J{\"a}ger, Natalie and Gu, Lei and Bogatyrëva, Olga and St{\"u}tz, Adrian M. and Claus, Rainer and Eils, J{\"u}rgen and Eils, Roland and Gerh{\"a}user, Clarissa and Huang, Po-Hsien and Hutter, Barbara and Kabbe, Rolf and Lawerenz, Christian and Radomski, Sylwester and Bartholomae, Cynthia C. and F{\"a}lth Savitski, Maria and Gade, Stephan and Schmidt, Manfred and Amschler, Nina and Haß, Thomas and Galal, Rami and Gjoni, Jovisa and Kuner, Ruprecht and Baer, Constance and Masser, Sawinee and Kalle, Christof von and Zichner, Thomas and Benes, Vladimir and Raeder, Benjamin and Mader, Malte and Amstislavskiy, Vyacheslav and Avci, Meryem and Lehrach, Hans and Parkhomchuk, Dmitri and Sultan, Marc and Burkhardt, Lia and Graefen, Markus and Huland, Hartwig and Kluth, Martina and Krohn, Antje and Sirma, H{\"u}seyin and Stumm, Laura and Steurer, Stefan and Grupp, Katharina and S{\"u}ltmann, Holger and Sauter, Guido and Plass, Christoph and Brors, Benedikt and Yaspo, Marie-Laure and Korbel, Jan Oliver and Schlomm, Thorsten},
  title={Integrative genomic analyses reveal an androgen-driven somatic alteration landscape in early-onset prostate cancer},
  year={2013},
  pages={159-170},
  language={eng},
  issn={1878-3686},
  volume={23},
  number={2},
  note={Gesehen am 28.10.2021},
  journal={Cancer cell},
  doi={10.1016/j.ccr.2013.01.002},
}
@incollection{UBHD-68020441,
  author={Werner, Stefan and Brors, Benedikt},
  title={Iroquois homeobox 2 suppresses cellular motility and chemokine expression in breast cancer cells},
  year={2015},
  language={eng},
  note={Gesehen am 22.08.2016},
  booktitle={Prognostic significance of macrophage invasion in hilar cholangiocarcinoma},
  doi={10.1186/s12885-015-1907-4},
}
@article{UBHD-68132469,
  author={Werner, Stefan and Brors, Benedikt and Eils, Roland},
  title={Suppression of early hematogenous dissemination of human breast cancer cells to bone marrow by retinoic acid-induced 2},
  year={2015},
  pages={506-519},
  language={eng},
  issn={2159-8290},
  volume={5},
  number={5},
  note={Gesehen am 29.06.2017},
  journal={Cancer discovery},
  doi={10.1158/2159-8290.CD-14-1042},
}
@article{UBHD-68401794,
  author={Wick, Wolfgang and Dettmer, Susan and Berberich, Anne and Keßler, Tobias and Karapanagiotou-Schenkel, Irini and Wick, Antje and Winkler, Frank and Pfaff, Elke and Brors, Benedikt and Debus, J{\"u}rgen and Unterberg, Andreas and Bendszus, Martin and Herold-Mende, Christel and Eisenmenger, Andreas and Deimling, Andreas von and Jones, David T. W. and Pfister, Stefan and Sahm, Felix and Platten, Michael},
  title={N2M2 (NOA-20) phase I/II trial of molecularly matched targeted therapies plus radiotherapy in patients with newly diagnosed non-MGMT hypermethylated glioblastoma},
  year={2019},
  pages={95-105},
  language={eng},
  issn={1523-5866},
  volume={21},
  number={1},
  note={Published: 01 October 2018 ; Im Titel ist die Ziffer 2 hochgestellt ; Gesehen am 26.06.2019},
  journal={Neuro-Oncology},
  doi={10.1093/neuonc/noy161},
}
@book{UBHD-68422961,
  author={Wiemann, Stefan and Brors, Benedikt and Herzig, Stephan and Eils, J{\"u}rgen},
  organization={Deutsches Krebsforschungszentrum},
  title={Schlussbericht zu dem im Rahmen des e:Bio - Innovationswettbewerbs Systembiologie Projektes Systembiologie der metabolischen Transformation in Brustkrebs (SYSMET-BC, Systems biology of metabolic transformation in breast cancer)},
  subtitle={Laufzeit des Vorhabens: 01.01.2013-30.4.2016},
  publisher={Deutsches Krebsforschungszentrum},
  address={Heidelberg},
  year={2016},
  pages={11 Bl{\"a}tter, 2 ungez{\"a}hlte Bl{\"a}tter},
  language={ger},
  note={F{\"o}rderkennzeichen BMBF 0316168C. - Verbund-Nummer 01125266 ; Autoren dem Berichtsblatt entnommen ; Unterschiede zwischen dem gedruckten Dokument und der elektronischen Ressource k{\"o}nnen nicht ausgeschlossen werden},
}
@book{UBHD-68422964,
  author={Wiemann, Stefan and Brors, Benedikt and Herzig, Stephan and Eils, J{\"u}rgen},
  organization={Deutsches Krebsforschungszentrum},
  title={Schlussbericht zu dem im Rahmen des e:Bio - Innovationswettbewerbs Systembiologie Projektes Systembiologie der metabolischen Transformation in Brustkrebs (SYSMET-BC, Systems biology of metabolic transformation in breast cancer)},
  subtitle={Laufzeit des Vorhabens: 01.01.2013-30.4.2016},
  publisher={Deutsches Krebsforschungszentrum},
  address={Heidelberg},
  year={2016},
  pages={1 Online-Ressource (13 Seiten, 497,32 KB)},
  language={ger},
  note={F{\"o}rderkennzeichen BMBF 0316168C. - Verbund-Nummer 01125266 ; Autoren dem Berichtsblatt entnommen ; Unterschiede zwischen dem gedruckten Dokument und der elektronischen Ressource k{\"o}nnen nicht ausgeschlossen werden},
  doi={10.2314/GBV:885662806},
}
@article{UBHD-68988808,
  author={Wolf, Thomas and Oumeraci, Tonio and Gottlieb, Jens and Pich, Andreas and Brors, Benedikt and Eils, Roland and Haverich, Axel and Schlegelberger, Brigitte and Welte, Tobias and Zapatka, Marc and von Neuhoff, Nils},
  title={Proteomic bronchiolitis obliterans syndrome risk monitoring in lung transplant recipients},
  year={2011},
  pages={477-485},
  language={eng},
  issn={1534-6080},
  volume={92},
  number={4},
  note={Gesehen am 24.11.2022},
  journal={Transplantation},
  doi={10.1097/TP.0b013e318224c109},
}
@article{UBHD-69142556,
  author={Wu, Yenan and Seufert, Isabelle and Al-Shaheri, Fawaz N. and Kurilov, Roman and Bauer, Andrea and Manoochehri, Mehdi and Moskalev, Evgeny A. and Brors, Benedikt and Tjaden, Christin and Giese, Nathalia and Hackert, Thilo and B{\"u}chler, Markus W. and Hoheisel, J{\"o}rg D.},
  title={DNA-methylation signature accurately differentiates pancreatic cancer from chronic pancreatitis in tissue and plasma},
  year={2023},
  pages={2344-2353},
  language={eng},
  issn={1468-3288},
  volume={72},
  number={12},
  note={Gesehen am 14.11.2023},
  journal={Gut},
  doi={10.1136/gutjnl-2023-330155},
}
@article{UBHD-68827059,
  author={Xu, Zhou and Hu, Kai and Bailey, Peter and Springfeld, Christoph and Roth, Susanne and Kurilov, Roman and Brors, Benedikt and Greß, Thomas and Buchholz, Malte and An, Jingyu and Wei, Kongyuan and Peccerella, Teresa and B{\"u}chler, Markus W. and Hackert, Thilo and Neoptolemos, John P.},
  title={Clinical impact of molecular subtyping of pancreatic cancer},
  year={2021},
  pages={1-16},
  language={eng},
  issn={2296-634X},
  volume={9(2021) vom: 5. Nov.},
  number={Artikel-ID 743908},
  note={Gesehen am 16.12.2021},
  journal={Frontiers in cell and developmental biology},
  doi={10.3389/fcell.2021.743908},
  url={https://doi.org/10.3389/fcell.2021.743908},
  library={UB},
}
@article{UBHD-69186470,
  author={Yousuf, Suhail and Qiu, Mengjie and Voith von Voithenberg, Lena and Hulkkonen, Johannes and Macinkovic, Igor and Schulz, Axel R. and Hartmann, Domenic and M{\"u}ller, Florian and Mijatovic, Margarete and Ibberson, David and Al Halabi, Karam and Hetzer, Jenny and Anders, Simon and Br{\"u}ne, Bernhard and Mei, Henrik E. and Imbusch, Charles and Brors, Benedikt and Heikenw{\"a}lder, Mathias and Gaida, Matthias and B{\"u}chler, Markus W. and Weigert, Andreas and Hackert, Thilo and Roth, Susanne},
  title={Spatially resolved multi-omics single-cell analyses inform mechanisms of immune dysfunction in pancreatic cancer},
  year={2023},
  pages={32 S.},
  language={eng},
  issn={1528-0012},
  volume={165},
  note={Gesehen am 27.02.2024},
  journal={Gastroenterology},
  doi={10.1053/j.gastro.2023.05.036},
}
@article{UBHD-68916677,
  author={Zheng, Chun and Li, Li and Haak, M. and Brors, Benedikt and Frank, Oliver and Giehl, Michelle and Fabarius, Alice and Schatz, M. and Weißer, Andreas and Lorentz, C. and Gretz, Norbert and Hehlmann, R{\"u}diger and Hochhaus, Andreas and Seifarth, Wolfgang},
  title={Gene expression profiling of CD34+ cells identifies a molecular signature of chronic myeloid leukemia blast crisis},
  year={2006},
  pages={1028-1034},
  language={eng},
  issn={1476-5551},
  volume={20},
  number={6},
  note={Gesehen am 10.05.2022},
  journal={Leukemia},
  doi={10.1038/sj.leu.2404227},
}
@article{UBHD-69124550,
  author={Zhou, Xu and An, Jingyu and Kurilov, Roman and Brors, Benedikt and Hu, Kai and Peccerella, Teresa and R{\"o}ssler, Stephanie and Pf{\"u}tze, Katrin and Schulz, Angela and Wolf, Stephan and Hohmann, Nicolas and Theile, Dirk and Sauter, Max and Burhenne, J{\"u}rgen and Ei, Shigenori and Heger, Ulrike and Strobel, Oliver and Barry, Simon T. and Springfeld, Christoph and Tjaden, Christin and Bergmann, Frank and B{\"u}chler, Markus W. and Hackert, Thilo and Fortunato, Franco and Neoptolemos, John P. and Bailey, Peter},
  title={Persister cell phenotypes contribute to poor patient outcomes after neoadjuvant chemotherapy in PDAC},
  year={2023},
  pages={1362-1381},
  language={eng},
  issn={2662-1347},
  volume={4},
  number={9},
  note={Gesehen am 26.09.2023},
  journal={Nature cancer},
  doi={10.1038/s43018-023-00628-6},
}