@article{UBHD-68188226, author={Barrow, Timothy M. and Toth, Reka and B{\"o}hm, J{\"u}rgen and Gigić, Biljana and Habermann, Nina and Scherer, Dominique and Schrotz-King, Petra and Abbenhardt-Martin, Clare and Schneider, Martin and Ulrich, Alexis and Schirmacher, Peter and Herpel, Esther and Brenner, Hermann and Ulrich, Cornelia}, title={Smoking is associated with hypermethylation of the APC 1A promoter in colorectal cancer}, subtitle={the ColoCare study}, year={2017}, pages={366-375}, language={eng}, issn={1096-9896}, volume={243}, number={3}, note={Gesehen am 09.11.2017}, journal={The journal of pathology}, doi={10.1002/path.4955}, } @article{UBHD-68979787, author={Chen, Yuanyuan and Toth, Reka and Chocarro, Sara and Weichenhan, Dieter and Hey, Joschka and Lutsik, Pavlo and Sawall, Stefan and Stathopoulos, Georgios and Plass, Christoph and Sotillo, Rocio}, title={Club cells employ regeneration mechanisms during lung tumorigenesis}, year={2022}, pages={1-16}, language={eng}, issn={2041-1723}, volume={13}, number={Artikel-ID 4557}, note={Gesehen am 28.10.2022}, journal={Nature Communications}, doi={10.1038/s41467-022-32052-2}, } @article{UBHD-68374139, author={Gerh{\"a}user, Clarissa and Feuerbach, Lars and Assenov, Yassen and H{\"u}bschmann, Daniel and Kuryshev, Vladimir and Weichenhan, Dieter and Toth, Reka and Lutsik, Pavlo and Lawerenz, Christian and Eils, Roland and Schlesner, Matthias and Kalle, Christof von and S{\"u}ltmann, Holger and Brors, Benedikt and Plass, Christoph and Korbel, Jan Oliver}, title={Molecular evolution of early-onset prostate cancer identifies molecular risk markers and clinical trajectories}, year={2018}, pages={996-1011.e8}, language={eng}, issn={1878-3686}, volume={34}, number={6}, note={Gesehen am 29.03.2019}, journal={Cancer cell}, doi={10.1016/j.ccell.2018.10.016}, } @article{UBHD-68212992, author={Gigić, Biljana and Toth, Reka and Habermann, Nina and Scherer, Dominique and Schrotz-King, Petra and Abbenhardt-Martin, Clare and Brenner, Hermann and Chang-Claude, Jenny and Hoffmeister, Michael and Schneider, Martin and Ulrich, Alexis and Ulrich, Cornelia}, title={Associations between dietary patterns and longitudinal quality of life changes in colorectal cancer patients}, subtitle={the ColoCare study}, year={2018}, pages={51-60}, language={eng}, issn={1532-7914}, volume={70}, number={1}, note={Gesehen am 24.01.2018}, journal={Nutrition and cancer}, doi={10.1080/01635581.2018.1397707}, } @article{UBHD-68556370, author={Goeppert, Benjamin and Toth, Reka and Albrecht, Thomas and Lipka, Daniel and Lutsik, Pavlo and Assenov, Yassen and Endris, Volker and Stenzinger, Albrecht and Mehrabi, Arianeb and Schirmacher, Peter and Plass, Christoph and Weichenhan, Dieter and R{\"o}ssler, Stephanie}, title={Integrative analysis defines distinct prognostic subgroups of intrahepatic cholangiocarcinoma}, year={2019}, pages={2091-2106}, language={eng}, issn={1527-3350}, volume={69}, number={5}, note={Gesehen am 27.03.2020}, journal={Hepatology}, doi={10.1002/hep.30493}, } @article{UBHD-68800856, author={Hey, Joschka and Paulsen, Michelle and Toth, Reka and Weichenhan, Dieter and Butz, Simone and Schatterny, Jolanthe and Liebers, Reinhard and Lutsik, Pavlo and Plass, Christoph and Mall, Marcus A.}, title={Epigenetic reprogramming of airway macrophages promotes polarization and inflammation in muco-obstructive lung disease}, year={2021}, pages={1-18}, language={eng}, issn={2041-1723}, volume={12}, number={Artikel-ID 6520}, note={Gesehen am 12.11.2021}, journal={Nature Communications}, doi={10.1038/s41467-021-26777-9}, } @article{UBHD-68327350, author={Klett, Hagen and Balavarca, Yesilda and Toth, Reka and Gigić, Biljana and Habermann, Nina and Scherer, Dominique and Schrotz-King, Petra and Ulrich, Alexis and Schirmacher, Peter and Herpel, Esther and Brenner, Hermann and Ulrich, Cornelia}, title={Robust prediction of gene regulation in colorectal cancer tissues from DNA methylation profiles}, year={2018}, pages={386-397}, language={eng}, issn={1559-2308}, volume={13}, number={4}, note={Gesehen am 12.11.2018}, journal={Epigenetics}, doi={10.1080/15592294.2018.1460034}, } @article{UBHD-68590045, author={Liesenfeld, David and Habermann, Nina and Toth, Reka and Owen, Robert and Frei, Eva and B{\"o}hm, J{\"u}rgen and Schrotz-King, Petra and Klika, Karel D. and Ulrich, Cornelia}, title={Changes in urinary metabolic profiles of colorectal cancer patients enrolled in a prospective cohort study (ColoCare)}, year={2015}, pages={998-1012}, language={eng}, issn={1573-3890}, volume={11}, number={4}, note={Published online: 20 December 2014 ; Gesehen am 23.06.2020}, journal={Metabolomics}, doi={10.1007/s11306-014-0758-3}, } @article{UBHD-68077023, author={Liesenfeld, David and Haffa, Mariam and Scherer, Dominique and Toth, Reka and Habermann, Nina and B{\"o}hm, J{\"u}rgen and Schrotz-King, Petra and Gigić, Biljana and Schneider, Martin and Ulrich, Alexis and Herpel, Esther and Schirmacher, Peter and Ulrich, Cornelia}, title={Metabolomics and transcriptomics identify pathway differences between visceral and subcutaneous adipose tissue in colorectal cancer patients}, subtitle={the ColoCare study}, year={2015}, pages={433-443}, language={eng}, issn={1938-3207 and 1938-3215}, volume={102}, number={2}, note={Gesehen am 25.01.2017}, journal={The American journal of clinical nutrition}, doi={10.3945/ajcn.114.103804}, } @article{UBHD-68313826, author={Lipka, Daniel and Witte, Tania and Toth, Reka and Yang, Jing and Wiesenfarth, Manuel and N{\"o}llke, Peter and Fischer, Alexandra and Brocks, David and Gu, Zuguang and Park, Jeongbin and Strahm, Brigitte and Wlodarski, Marcin and Yoshimi, Ayami and Claus, Rainer and L{\"u}bbert, Michael and Busch, Hauke and B{\"o}rries, Melanie and Hartmann, Mark and Sch{\"o}nung, Maximilian and Kilik, Umut and Langstein, Jens and Wierzbinska, Justyna A. and Pabst, Caroline and Garg, Swati and Catalá, Albert and Moerloose, Barbara de and Dworzak, Michael and Hasle, Henrik and Locatelli, Franco and Masetti, Riccardo and Schmugge Liner, Markus and Smith, Owen and Stary, Jan and Ussowicz, Marek and Heuvel-Eibrink, Marry M. van den and Assenov, Yassen and Schlesner, Matthias and Niemeyer, Charlotte and Flotho, Christian and Plass, Christoph}, title={RAS-pathway mutation patterns define epigenetic subclasses in juvenile myelomonocytic leukemia}, year={2017}, pages={1-14}, language={eng}, issn={2041-1723}, volume={8}, number={Artikel-ID 2126}, note={Gesehen am 10.10.2018}, journal={Nature Communications}, doi={10.1038/s41467-017-02177-w}, } @article{UBHD-68784437, author={Liu, Chun-Shan and Toth, Reka and Bakr, Ali and Goyal, Ashish and Islam, Md Saiful and Breuer, Kersten and Mayakonda Thippeswamy, Anand and Lin, Yu-Yu and Stepper, Peter and Jurkowski, Tomasz P. and Veldwijk, Marlon Romano and Sperk, Elena and Herskind, Carsten and Lutsik, Pavlo and Weichenhan, Dieter and Plass, Christoph and Schmezer, Peter and Popanda, Odilia}, title={Epigenetic modulation of radiation-induced diacylglycerol kinase alpha expression prevents pro-fibrotic fibroblast response}, year={2021}, pages={1-26}, language={eng}, issn={2072-6694}, volume={13}, note={Gesehen am 29.09.2021}, journal={Cancers}, doi={10.3390/cancers13102455}, } @article{UBHD-68682321, author={Lutsik, Pavlo and Baude, Annika and Mancarella, Daniela and {\"O}z, Aliye Simin and K{\"u}hn, Alexander and Toth, Reka and Hey, Joschka and Toprak, Umut and Lim, Jinyeong and Viet Hanh Nguyen and Jiang, Chao and Mayakonda Thippeswamy, Anand and Hartmann, Mark and Rosemann, Felix and Breuer, Kersten and Vonficht, Dominik and Gr{\"u}nschl{\"a}ger, Florian and Lee, Suman and Schuhmacher, Maren Kirstin and Kusevic, Denis and Jauch, Anna and Weichenhan, Dieter and Zustin, Jozef and Schlesner, Matthias and Haas, Simon and Park, Joo Hyun and Park, Yoon Jung and Oppermann, Udo and Jeltsch, Albert and Haller, Florian and Fellenberg, J{\"o}rg and Lindroth, Anders M. and Plass, Christoph}, title={Globally altered epigenetic landscape and delayed osteogenic differentiation in H3.3-G34W-mutant giant cell tumor of bone}, year={2020}, pages={16 S.}, language={eng}, issn={2041-1723}, volume={11(2020) Artikel-Nummer 5414}, number={16 Seiten}, note={Gesehen am 21.01.2021}, journal={Nature Communications}, doi={10.1038/s41467-020-18955-y}, } @article{UBHD-68778867, author={Mayakonda Thippeswamy, Anand and Sch{\"o}nung, Maximilian and Hey, Joschka and Batra, Rajbir and Feuerstein-Akg{\"o}z, Clarissa and K{\"o}hler, Kristin and Lipka, Daniel and Sotillo, Rocio and Plass, Christoph and Lutsik, Pavlo and Toth, Reka}, title={Methrix}, subtitle={an R/bioconductor package for systematic aggregation and analysis of bisulfite sequencing data}, year={2020}, pages={5524-5525}, language={eng}, issn={1367-4811}, volume={36}, number={22/23}, note={Advance access publication date: 25 December 2020 ; Gesehen am 13.09.2021}, journal={Bioinformatics}, doi={10.1093/bioinformatics/btaa1048}, } @article{UBHD-68643700, author={Scherer, Dominique and Deutelmoser, Heike and Balavarca, Yesilda and Toth, Reka and Habermann, Nina and Buck, Katharina and Kap, Elisabeth Johanna and Botma, Akke and Seibold, Petra Beate and Jansen, Lina and Lorenzo Bermejo, Justo and Weigl, Korbinian and Benner, Axel and Hoffmeister, Michael and Ulrich, Alexis and Brenner, Hermann and Burwinkel, Barbara and Chang-Claude, Jenny and Ulrich, Cornelia}, title={Polymorphisms in the angiogenesis}, subtitle={related genes EFNB2, MMP2 and JAG1 are associated with survival of colorectal cancer patients}, year={2020}, pages={15 S.}, language={eng}, issn={1422-0067 and 1661-6596}, volume={21(2020}, note={Gesehen am 06.10.2020}, journal={International journal of molecular sciences}, doi={10.3390/ijms21155395}, } @article{UBHD-68287425, author={Toth, Reka and Scherer, Dominique and Risch, Angela and Balavarca, Yesilda and Ulrich, Cornelia}, title={Genetic variants in epigenetic pathways and risks of multiple cancers in the GAME-ON Consortium}, year={2017}, pages={816-825}, language={eng}, issn={1538-7755}, volume={26}, number={6}, note={Gesehen am 20.07.2018}, journal={Cancer epidemiology, biomarkers & prevention}, doi={10.1158/1055-9965.EPI-16-0728}, } @article{UBHD-68572616, author={Wierzbińska, Justyna Anna and Toth, Reka and Ishaque, Naveed and Rippe, Karsten and Mallm, Jan-Philipp and Klett, Lara C. and Mertens, Daniel and Zenz, Thorsten and Hielscher, Thomas and Seifert, Marc and K{\"u}ppers, Ralf and Assenov, Yassen and Lutsik, Pavlo and Stilgenbauer, Stephan and R{\"o}ßner, Philipp M. and Seiffert, Martina and Byrd, John and Oakes, Christopher C. and Plass, Christoph and Lipka, Daniel}, title={Methylome-based cell-of-origin modeling (Methyl-COOM) identifies aberrant expression of immune regulatory molecules in CLL}, year={2020}, pages={1-19}, language={eng}, issn={1756-994X}, volume={12}, number={Artikel-ID 29}, note={Gesehen am 30.04.2020}, journal={Genome medicine}, doi={10.1186/s13073-020-00724-7}, }