@article{UBHD-68248865, author={Bosic, Martina and Kirchner, Martina and Leichsenring, Jonas and Lier, Amelie and Volckmar, Anna-Lena and Oliveira, Cristiano and Buchhalter, Ivo and St{\"o}gbauer, Fabian and Goeppert, Benjamin and Schirmacher, Peter and Penzel, Roland and Endris, Volker and Stenzinger, Albrecht}, title={Targeted molecular profiling reveals genetic heterogeneity of poromas and porocarcinomas}, year={2018}, pages={327-332}, language={eng}, issn={1465-3931}, volume={50}, number={3}, note={Available online 18 December 2017 ; Gesehen am 03.05.2018}, journal={Pathology}, doi={10.1016/j.pathol.2017.10.011}, } @book{UBHD-68154342, author={Buchhalter, Ivo}, organization={Universit{\"a}t Heidelberg}, title={Quality assessment and analysis of whole genome sequencing data in cancer and its application to describe the genomic landscape of medulloblastoma}, address={Heidelberg}, year={2017}, pages={II, 139 Seiten}, language={eng}, school={Dissertation, Ruperto-Carola University of Heidelberg, 2017}, library={UB [Signatur: 2017 U 629]}, } @article{UBHD-68360071, author={Buchhalter, Ivo and Rempel, Eugen and Endris, Volker and Allg{\"a}uer, Michael and Neumann, Olaf and Volckmar, Anna-Lena and Kirchner, Martina and Leichsenring, Jonas and Lier, Amelie and Winterfeld, Moritz von and Penzel, Roland and Christopoulos, Petros and Thomas, Michael and Fr{\"o}hling, Stefan and Schirmacher, Peter and Budczies, Jan and Stenzinger, Albrecht}, title={Size matters}, subtitle={Dissecting key parameters for panel-based tumor mutational burden analysis}, year={2019}, pages={848-858}, language={eng}, issn={1097-0215}, volume={144}, number={4}, note={Online 21 September 2018 ; Gesehen am 19.02.2019}, journal={International journal of cancer}, doi={10.1002/ijc.31878}, } @article{UBHD-68389677, author={Christopoulos, Petros and Endris, Volker and Bozorgmehr, Farastuk and El Sayed, Mei and Kirchner, Martina and Ristau, Jonas and Buchhalter, Ivo and Penzel, Roland and Herth, Felix and Heußel, Claus Peter and Eichhorn, Martin E. and Muley, Thomas and Meister, Michael and Rieken, Stefan and Warth, Arne and Bischoff, Helge and Schirmacher, Peter and Stenzinger, Albrecht and Thomas, Michael}, title={EML4-ALK fusion variant V3 is a high-risk feature conferring accelerated metastatic spread, early treatment failure and worse overall survival in ALK+ non-small cell lung cancer}, year={2018}, pages={2589-2598}, language={eng}, issn={1097-0215}, volume={142}, number={12}, note={First published: 24 January 2018 ; Gesehen am 14.05.2019}, journal={International journal of cancer}, doi={10.1002/ijc.31275}, } @article{UBHD-68406340, author={Feuerbach, Lars and Sieverling, Lina Katharine and Deeg, Katharina and Hutter, Barbara and Buchhalter, Ivo and Mughal, Sadaf Shabbir and Chudasama, Priya and Glimm, Hanno and Scholl, Claudia and Lichter, Peter and Fr{\"o}hling, Stefan and Pfister, Stefan and Jones, David T. W. and Rippe, Karsten and Brors, Benedikt}, title={TelomereHunter}, subtitle={in silico estimation of telomere content and composition from cancer genomes}, year={2019}, pages={11 S.}, language={eng}, issn={1471-2105}, volume={20(2019) Artikel-Nummer 272}, number={11 Seiten}, note={Gesehen am 09.07.2019}, journal={BMC bioinformatics}, doi={10.1186/s12859-019-2851-0}, } @article{UBHD-68263864, author={Gießler, Klara Monika and Kleinheinz, Kortine and H{\"u}bschmann, Daniel and Balasubramanian, Gnana Prakash and Dubash, Taronish Dorab and Dieter, Sebastian M. and Siegl, Christine and Herbst, Friederike and Weber, Sarah and Hoffmann, Christopher M. and Fronza, Raffaele and Buchhalter, Ivo and Paramasivam, Nagarajan and Eils, Roland and Schmidt, Manfred and Kalle, Christof von and Schneider, Martin and Ulrich, Alexis and Scholl, Claudia and Fr{\"o}hling, Stefan and Weichert, Wilko and Brors, Benedikt and Schlesner, Matthias and Ball, Claudia R. and Glimm, Hanno}, title={Genetic subclone architecture of tumor clone-initiating cells in colorectal cancer}, year={2017}, pages={2073-2088}, language={eng}, issn={1540-9538}, volume={214}, number={7}, note={Published June 1, 2017 ; Gesehen am 20.06.2018}, journal={Journal of experimental medicine}, doi={10.1084/jem.20162017}, } @article{UBHD-68980320, author={Jahn, Arne and Rump, A. and Widmann, T. J. and Heining, C. and Horak, Peter and Hutter, Barbara and Paramasivam, Nagarajan and Uhrig, Sebastian and Gieldon, Laura and Drukewitz, S. and K{\"u}bler, A. and Bermudez, M. and Hackmann, K. and Porrmann, J. and Wagner, J. and Arlt, M. and Franke, M. and Fischer, J. and Kowalzyk, Z. and William, D. and Weth, V. and Oster, S. and Fr{\"o}hlich, M. and H{\"u}llein, Jennifer and Valle González, C. and Kreutzfeldt, Simon and Mock, Andreas and Heilig, Christoph E. and Lipka, Daniel and M{\"o}hrmann, L. and Hanf, D. and Oleś, M. and Teleanu, Maria-Veronica and Allg{\"a}uer, Michael and Ruhnke, L. and Kutz, O. and Knurr, Alexander and Laßmann, Andreas and Endris, Volker and Neumann, Olaf and Penzel, Roland and Beck, K. and Richter, D. and Winter, U. and Wolf, S. and Pf{\"u}tze, Katrin and Ge{\"o}rg, C. and Meissburger, Bettina and Buchhalter, Ivo and Augustin, M. and Aulitzky, W. E. and Hohenberger, Peter and Kroiss, M. and Schirmacher, Peter and Schlenk, Richard Friedrich and Keilholz, Ulrich and Klauschen, Frederick and Folprecht, G. and Bauer, S. and Siveke, J. T. and Brandts, C. H. and Kindler, T. and Boerries, M. and Illert, A. L. and von Bubnoff, N. and Jost, P. J. and Metzeler, K. H. and Bitzer, M. and Schulze-Osthoff, K. and Kalle, Christof von and Brors, Benedikt and Stenzinger, Albrecht and Weichert, Wilko and H{\"u}bschmann, Daniel and Fr{\"o}hling, Stefan and Glimm, Hanno and Schr{\"o}ck, E. and Klink, Barbara}, title={Comprehensive cancer predisposition testing within the prospective MASTER trial identifies hereditary cancer patients and supports treatment decisions for rare cancers}, year={2022}, pages={1186-1199}, language={eng}, issn={1569-8041}, volume={33}, number={11}, note={Online ver{\"o}ffentlicht am 18. August 2022, Artikelversion 25. Oktober 2022 ; Gesehen am 31.10.2022}, journal={Annals of oncology}, doi={10.1016/j.annonc.2022.07.008}, } @article{UBHD-68579653, author={Koşaloğlu, Zeynep and Z{\"o}rnig, Inka and Halama, Niels and Kaiser, Iris and Buchhalter, Ivo and Grabe, Niels and Eils, Roland and Schlesner, Matthias and Califano, Andrea and J{\"a}ger, Dirk}, title={Identification of immunotherapeutic targets by genomic profiling of rectal NET metastases}, year={2016}, pages={11 S.}, language={eng}, issn={2162-402X}, volume={5(2016}, note={Gesehen am 20.05.2020}, journal={OncoImmunology}, doi={10.1080/2162402X.2016.1213931}, } @article{UBHD-68458669, author={Lin, Charles Y. and Zapatka, Marc and Jones, Barbara Christine and Jones, David T. W. and Kool, Marcel and Buchhalter, Ivo and Johann, Pascal-David and Chavez, Lukas and Gr{\"o}schel, Stefan and Eils, Roland and Lichter, Peter and Pfister, Stefan and Kawauchi, Daisuke and Korbel, Jan Oliver}, title={Active medulloblastoma enhancers reveal subgroup-specific cellular origins}, year={2016}, pages={57-62}, language={eng}, issn={1476-4687}, volume={530}, number={7588}, note={Gesehen am 21.11.2019}, journal={Nature}, doi={10.1038/nature16546}, } @article{UBHD-68261293, author={Sahm, Felix and H{\"u}bschmann, Daniel and Kleinheinz, Kortine and Buchhalter, Ivo and Sill, Martin and Stichel, Damian and Schrimpf, Daniel and Herold-Mende, Christel and Eils, Roland and Sturm, Dominik and Jones, David T. W. and Pfister, Stefan and Deimling, Andreas von}, title={Meningiomas induced by low-dose radiation carry structural variants of NF2 and a distinct mutational signature}, year={2017}, pages={155-158}, language={eng}, issn={1432-0533}, volume={134}, number={1}, note={Published online: 4 May 2017 ; Gesehen am 14.06.2018}, journal={Acta neuropathologica}, doi={10.1007/s00401-017-1715-9}, } @article{UBHD-68443888, author={Sturm, Dominik and Orr, Brent A. and Toprak, Umut and Hovestadt, Volker and Jones, David T. W. and Capper, David and Sill, Martin and Buchhalter, Ivo and Northcott, Paul A. and Leis, Irina and Ryzhova, Marina and K{\"o}lsche, Christian and Pfaff, Elke and Allen, Sariah J. and Balasubramanian, Gnana Prakash and Jones, Barbara Christine and Pajtler, Kristian Wilfried and Brabetz, Sebastian and Johann, Pascal-David and Sahm, Felix and Reimand, J{\"u}ri and Mackay, Alan and Carvalho, Diana M. and Remke, Marc and Phillips, Joanna J. and Perry, Arie and Cowdrey, Cynthia and Drissi, Rachid and Fouladi, Maryam and Giangaspero, Felice and Łastowska, Maria and Grajkowska, Wiesława and Scheurlen, Wolfram and Pietsch, Torsten and Hagel, Christian and Gojo, Johannes and L{\"o}tsch, Daniela and Berger, Walter and Slavc, Irene and Haberler, Christine and Jouvet, Anne and Holm, Stefan and Hofer, Silvia and Prinz, Marco and Keohane, Catherine and Fried, Iris and Mawrin, Christian and Scheie, David and Mobley, Bret C. and Schniederjan, Matthew J. and Santi, Mariarita and Buccoliero, Anna M. and Dahiya, Sonika and Kramm, Christof M. and Bueren, André von and Hoff, Katja von and Rutkowski, Stefan and Herold-Mende, Christel and Fr{\"u}hwald, Michael and Milde, Till and Hasselblatt, Martin and Wesseling, Pieter and R{\"o}ßler, Jochen and Sch{\"u}ller, Ulrich and Ebinger, Martin and Schittenhelm, Jens Florian and Frank, Stephan and Grobholz, Rainer and Vajtai, Istvan and Schneppenheim, Reinhard and Zitterbart, Karel and Collins, V. Peter and Aronica, Eleonora and Varlet, Pascale and Puget, Stephanie and Dufour, Christelle and Grill, Jacques and Figarella-Branger, Dominique and Wolter, Marietta and Schuhmann, Martin Ulrich and Shalaby, Tarek and Grotzer, Michael and Meter, Timothy van and Felsberg, J{\"o}rg and Reifenberger, Guido and Snuderl, Matija and Forrester, Lynn Ann and Koster, Jan and Versteeg, Rogier and Volckmann, Richard and Sluis, Peter van and Wolf, Stephan and Mikkelsen, Tom and Gajjar, Amar and Aldape, Kenneth and Moore, Andrew S. and Taylor, Michael D. and Jones, Chris and Jabado, Nada and Karajannis, Matthias A. and Eils, Roland and Schlesner, Matthias and Lichter, Peter and Deimling, Andreas von and Pfister, Stefan and Ellison, David W. and Korshunov, Andrey and Kool, Marcel}, title={New brain tumor entities emerge from molecular classification of CNS-PNETs}, year={2016}, pages={1060-1072}, language={eng}, issn={1097-4172}, volume={164}, number={5}, note={Gesehen am 23.10.2019}, journal={Cell}, doi={10.1016/j.cell.2016.01.015}, } @article{UBHD-68359655, author={Volckmar, Anna-Lena and Leichsenring, Jonas and Kirchner, Martina and Christopoulos, Petros and Neumann, Olaf and Budczies, Jan and Oliveira, Cristiano and Rempel, Eugen and Buchhalter, Ivo and Brandt, Regine and Allg{\"a}uer, Michael and Talla, Suranand Babu and Winterfeld, Moritz von and Herpel, Esther and Goeppert, Benjamin and Lier, Amelie and Winter, Hauke and Fr{\"o}hling, Stefan and Heußel, Claus Peter and Herth, Felix and Lasitschka, Felix and Schirmacher, Peter and Thomas, Michael and Endris, Volker and Penzel, Roland and Stenzinger, Albrecht}, title={Combined targeted DNA and RNA sequencing of advanced NSCLC in routine molecular diagnostics}, subtitle={analysis of the first 3000 Heidelberg cases}, year={2019}, pages={649-661}, language={eng}, issn={1097-0215}, volume={145}, number={3}, note={Accepted manuscript online: 17 January 2019 ; Gesehen am 18.02.2019}, journal={International journal of cancer}, doi={10.1002/ijc.32133}, } @article{UBHD-68588486, author={Waszak, Sebastian Martin and Buchhalter, Ivo and Kerssemakers, Jules and J{\"a}ger, Natalie and Sharma, Tanvi and Rausch, Tobias and Kool, Marcel and Sturm, Dominik and Jones, David T. W. and Milde, Till and Witt, Olaf and Korshunov, Andrey and Lichter, Peter and Korbel, Jan Oliver and Pfister, Stefan}, title={Germline elongator mutations in Sonic Hedgehog medulloblastoma}, year={2020}, pages={396-401}, language={eng}, issn={1476-4687}, volume={580}, number={7803}, note={Gesehen am 18.06.2020}, journal={Nature}, doi={10.1038/s41586-020-2164-5}, } @article{UBHD-68264794, author={Waszak, Sebastian Martin and Northcott, Paul A. and Buchhalter, Ivo and Sutter, Christian and Grund, Kerstin and Jones, David T. W. and Pajtler, Kristian Wilfried and Kool, Marcel and Sturm, Dominik and Milde, Till and Eils, Roland and Bartram, Claus R. and Lichter, Peter and Pfister, Stefan}, title={Spectrum and prevalence of genetic predisposition in medulloblastoma}, subtitle={a retrospective genetic study and prospective validation in a clinical trial cohort}, year={2018}, pages={785-798}, language={eng}, issn={1474-5488}, volume={19}, number={6}, note={Published online: May 9, 2018 ; Gesehen am 25.06.2018}, journal={The lancet}, doi={10.1016/S1470-2045(18)30242-0}, } @article{UBHD-68661299, author={Whalley, Justin P. and Buchhalter, Ivo and Rheinbay, Esther and Raine, Keiran M. and Stobbe, Miranda D. and Kleinheinz, Kortine and Werner, Johannes and Beltran, Sergi and Gut, Marta and H{\"u}bschmann, Daniel and Hutter, Barbara and Livitz, Dimitri and Perry, Marc D. and Rosenberg, Mara and Saksena, Gordon and Trotta, Jean-Rémi and Eils, Roland and Gerhard, Daniela S. and Campbell, Peter J. and Schlesner, Matthias and Gut, Ivo G.}, title={Framework for quality assessment of whole genome cancer sequences}, year={2020}, language={eng}, issn={2041-1723}, volume={11(2020) Artikel-Nummer 5040}, number={8 Seiten}, note={Gesehen am 16.11.2020}, journal={Nature Communications}, doi={10.1038/s41467-020-18688-y}, }