@article{UBHD-68903480,
  author={Abdulrahman, Ziena and Santegoets, Saskia J. and Sturm, Gregor and Charoentong, Pornpimol and Ijsselsteijn, Marieke E. and Somarakis, Antonios and H{\"o}llt, Thomas and Finotello, Francesca and Trajanoski, Zlatko and Egmond, Sylvia L. van and Mustafa, Dana A. M. and Welters, Marij J. P. and Miranda, Noel F. C. C. de and Burg, Sjoerd H. van der},
  title={Tumor-specific T cells support chemokine-driven spatial organization of intratumoral immune microaggregates needed for long survival},
  year={2022},
  pages={1-17},
  language={eng},
  issn={2051-1426},
  volume={10},
  note={Gesehen am 05.04.2022},
  journal={Journal for ImmunoTherapy of Cancer},
  doi={10.1136/jitc-2021-004346},
}
@article{UBHD-69068386,
  author={Elsas, Marit van and Labrie, Camilla and Etzerodt, Anders and Charoentong, Pornpimol and Thans, Jordi J. C. van Stigt and Hall, Thorbald Van and Burg, Sjoerd H. van der},
  title={Invasive margin tissue-resident macrophages of high CD163 expression impede responses to T cell-based immunotherapy},
  year={2023},
  pages={1-24},
  language={eng},
  issn={2051-1426},
  volume={11},
  note={Gesehen am 24.04.2023},
  journal={Journal for ImmunoTherapy of Cancer},
  doi={10.1136/jitc-2022-006433},
}
@article{UBHD-68448114,
  author={Finotello, Francesca and Mayer, Clemens and Charoentong, Pornpimol},
  title={Correction to: Molecular and pharmacological modulators of the tumor immune contexture revealed by deconvolution of RNA-seq data},
  year={2019},
  pages={3 S.},
  language={eng},
  issn={1756-994X},
  volume={11(2019) Artikel-Nummer 50},
  number={3 Seiten},
  note={Gesehen am 30.10.2019},
  journal={Genome medicine},
  doi={10.1186/s13073-019-0655-5},
}
@article{UBHD-68410823,
  author={Finotello, Francesca and Mayer, Clemens and Charoentong, Pornpimol},
  title={Molecular and pharmacological modulators of the tumor immune contexture revealed by deconvolution of RNA-seq data},
  year={2019},
  pages={20 S.},
  language={eng},
  issn={1756-994X},
  volume={11(2019) Artikel-Nummer 34},
  number={20 Seiten},
  note={Gesehen am 22.07.2019},
  journal={Genome medicine},
  doi={10.1186/s13073-019-0638-6},
}
@article{UBHD-68465857,
  author={Kather, Jakob Nikolas and Charoentong, Pornpimol and Suarez-Carmona, Meggy and Herpel, Esther and Klupp, Fee and Ulrich, Alexis and Schneider, Martin and Z{\"o}rnig, Inka and J{\"a}ger, Dirk and Halama, Niels},
  title={High-throughput screening of combinatorial immunotherapies with patient-specific in silico models of metastatic colorectal cancer},
  year={2018},
  pages={5155-5163},
  language={eng},
  issn={1538-7445},
  volume={78},
  number={17},
  note={Gesehen am 10.12.2019},
  journal={Cancer research},
  doi={10.1158/0008-5472.CAN-18-1126},
}
@article{UBHD-68202958,
  author={Kather, Jakob Nikolas and Suarez-Carmona, Meggy and Krisam, Johannes and Charoentong, Pornpimol and Valous, Nektarios A. and Weis, Cleo-Aron Thias and Tavernar, Luca and Herpel, Esther and Klupp, Fee and Ulrich, Alexis and Schneider, Martin and Marx, Alexander and J{\"a}ger, Dirk and Halama, Niels},
  title={In silico modeling of immunotherapy and stroma-targeting therapies in human colorectal cancer},
  year={2017},
  pages={6442-6452},
  language={eng},
  issn={1538-7445},
  volume={77},
  number={22},
  note={Gesehen am 18.12.2017},
  journal={Cancer research},
  doi={10.1158/0008-5472.CAN-17-2006},
}
@article{UBHD-68373685,
  author={Kather, Jakob Nikolas and Krisam, Johannes and Charoentong, Pornpimol and Herpel, Esther and Weis, Cleo-Aron Thias and Gaiser, Timo and Marx, Alexander and Valous, Nektarios A. and Ferber, Dyke and Z{\"o}rnig, Inka and J{\"a}ger, Dirk and Brenner, Hermann and Chang-Claude, Jenny and Hoffmeister, Michael and Halama, Niels},
  title={Predicting survival from colorectal cancer histology slides using deep learning},
  subtitle={a retrospective multicenter study},
  year={2019},
  pages={22 S.},
  language={eng},
  issn={1549-1676},
  volume={16(2019},
  note={Gesehen am 27.03.2019},
  journal={PLoS medicine},
  doi={10.1371/journal.pmed.1002730},
}
@article{UBHD-68328734,
  author={Kather, Jakob Nikolas and Suarez-Carmona, Meggy and Charoentong, Pornpimol and Weis, Cleo-Aron Thias and Hirsch, Daniela and Ferber, Dyke and Kel, Ivan and Herpel, Esther and Schott, Sarah and Z{\"o}rnig, Inka and Utikal, Jochen and Marx, Alexander and Gaiser, Timo and Brenner, Hermann and Chang-Claude, Jenny and Hoffmeister, Michael and J{\"a}ger, Dirk and Halama, Niels},
  title={Topography of cancer-associated immune cells in human solid tumors},
  year={2018},
  pages={19 S.},
  language={eng},
  issn={2050-084X},
  volume={7},
  number={Artikel-ID e36967},
  note={Gesehen am 15.11.2018},
  journal={eLife},
  doi={10.7554/eLife.36967},
}
@article{UBHD-68704371,
  author={Klebe, Max and Fremd, Carlo and Kriegsmann, Mark and Kriegsmann, Katharina and Albrecht, Thomas and Thewes, Verena and Kirchner, Martina and Charoentong, Pornpimol and Volk, Nadine and Haag, Johannes C. and Wirtz, Ralph and Oskarsson, Thordur and Schulz, Alexandra and Heil, J{\"o}rg and Schneeweiss, Andreas and Winter, Hauke and Sinn, Peter},
  title={Frequent molecular subtype switching and gene expression alterations in lung and pleural metastasis from luminal A-type breast cancer},
  year={2020},
  pages={848-859},
  language={eng},
  issn={2473-4284},
  volume={4},
  note={Gesehen am 26.02.2021},
  journal={JCO precision oncology},
  doi={10.1200/PO.19.00337},
}
@article{UBHD-68871859,
  author={Kortekaas, Kim E. and Santegoets, Saskia J. and Tas, Liselotte and Ehsan, Ilina and Charoentong, Pornpimol and Doorn, Helena C. van and Poelgeest, Mariette I. E. van and Mustafa, Dana A. M. and Burg, Sjoerd H. van der},
  title={Primary vulvar squamous cell carcinomas with high T cell infiltration and active immune signaling are potential candidates for neoadjuvant PD-1/PD-L1 immunotherapy},
  year={2021},
  pages={1-13},
  language={eng},
  issn={2051-1426},
  volume={9},
  note={Gesehen am 28.01.2022},
  journal={Journal for ImmunoTherapy of Cancer},
  doi={10.1136/jitc-2021-003671},
}
@article{UBHD-69212245,
  author={Meyer, Marten and Parpoulas, Christina and Barthélémy, Titouan and Becker, Jonas Philipp and Charoentong, Pornpimol and Lyu, Yanhong and B{\"o}rsig, Selina and Bulbuc, Nadja and Tessmer, Claudia and Weinacht, Lisa and Ibberson, David and Schmidt, Patrick and Pipkorn, R{\"u}diger and Eichm{\"u}ller, Stefan B. and Steinberger, Peter and Lindner, Katharina and Poschke, Isabel and Platten, Michael and Fr{\"o}hling, Stefan and Riemer, Angelika and Hassel, Jessica C. and Roberti, Maria Paula and J{\"a}ger, Dirk and Z{\"o}rnig, Inka and Momburg, Frank},
  title={MediMer},
  subtitle={a versatile do-it-yourself peptide-receptive MHC class I multimer platform for tumor neoantigen-specific T cell detection},
  year={2024},
  pages={24 S.},
  language={eng},
  issn={1664-3224},
  volume={14},
  number={Artikel-ID 1294565},
  note={Gesehen am 08.05.2024},
  journal={Frontiers in immunology},
  doi={10.3389/fimmu.2023.1294565},
}
@article{UBHD-68544071,
  author={Montfoort, Nadine van and Borst, Linda and Korrer, Michael J. and Sluijter, Marjolein and Marijt, Koen A. and Santegoets, Saskia J. and van Ham, Vanessa J. and Ehsan, Ilina and Charoentong, Pornpimol and André, Pascale and Wagtmann, Nicolai and Welters, Marij J.P. and Kim, Young J. and Piersma, Sytse J. and van der Burg, Sjoerd H. and van Hall, Thorbald},
  title={NKG2A blockade potentiates CD8 T-cell immunity induced by cancer vaccines},
  year={2018},
  pages={1744-1755.e15},
  language={eng},
  issn={1097-4172},
  volume={175},
  number={7},
  note={Gesehen am 19.03.2020},
  journal={Cell},
  doi={10.1016/j.cell.2018.10.028},
}
@article{UBHD-68719054,
  author={Pfl{\"u}gler, Sandra and Svinka, Jasmin and Scharf, Irene and Crncec, Ilija and Filipits, Martin and Charoentong, Pornpimol and Tschurtschenthaler, Markus and Kenner, Lukas and Awad, Monira and Stift, Judith and Schernthanner, Marina and Bischl, Romana and Herndler-Brandstetter, Dietmar and Glitzner, Elisabeth and Moll, Herwig P. and Casanova, Emilio and Timelthaler, Gerald and Sibilia, Maria and Gnant, Michael and Lax, Sigurd and Thaler, Josef and M{\"u}ller, Mathias and Strobl, Birgit and Mohr, Thomas and Kaser, Arthur and Trajanoski, Zlatko and Heller, Gerwin and Eferl, Robert},
  title={IDO1 + Paneth cells promote immune escape of colorectal cancer},
  year={2020},
  pages={1-14},
  language={eng},
  issn={2399-3642},
  volume={3},
  number={Artikel-ID 252},
  note={Im Titel ist "+" hochgestellt ; Gesehen am 01.04.2021},
  journal={Communications biology},
  doi={10.1038/s42003-020-0989-y},
}
@article{UBHD-69293595,
  author={Salek, Mogjiborahman and F{\"o}rster, Jonas and Becker, Jonas Philipp and Meyer, Marten and Charoentong, Pornpimol and Lyu, Yanhong and Lindner, Katharina and Lotsch, Catharina and Volkmar, Michael and Momburg, Frank and Poschke, Isabel and Fr{\"o}hling, Stefan and Schmitz, Marc and Offringa, Rienk and Platten, Michael and J{\"a}ger, Dirk and Z{\"o}rnig, Inka and Riemer, Angelika},
  title={optiPRM},
  subtitle={a targeted immunopeptidomics LC-MS workflow with ultra-high sensitivity for the detection of mutation-derived tumor neoepitopes from limited input material},
  year={2024},
  pages={1-16},
  language={eng},
  issn={1535-9484},
  volume={23},
  note={Artikelversion: 5. September 2024 ; Gesehen am 23.01.2025},
  journal={Molecular & cellular proteomics},
  doi={10.1016/j.mcpro.2024.100825},
}
@article{UBHD-68390788,
  author={Santegoets, Saskia J. A. M. and Charoentong, Pornpimol},
  title={The anatomical location shapes the immune infiltrate in tumors of same etiology and affects survival},
  year={2019},
  pages={240-252},
  language={eng},
  issn={1557-3265},
  volume={25},
  number={1},
  note={published first September 17, 2018 ; Gesehen am 17.05.2019},
  journal={Clinical cancer research},
  doi={10.1158/1078-0432.CCR-18-1749},
}
@article{UBHD-68568661,
  author={Sch{\"o}pf, Bernd and Weissensteiner, Hansi and Sch{\"a}fer, Georg and Fazzini, Federica and Charoentong, Pornpimol and Naschberger, Andreas and Rupp, Bernhard and Fendt, Liane and Bukur, Valesca and Giese, Irina and Sorn, Patrick and Sant’Anna-Silva, Ana Carolina and Iglesias-Gonzalez, Javier and Sahin, Ugur and Kronenberg, Florian and Gnaiger, Erich and Klocker, Helmut},
  title={OXPHOS remodeling in high-grade prostate cancer involves mtDNA mutations and increased succinate oxidation},
  year={2020},
  pages={16 S.},
  language={eng},
  issn={2041-1723},
  volume={11(2020) Artikel-Nummer 1487},
  number={16 Seiten},
  note={Gesehen am 21.04.2020},
  journal={Nature Communications},
  doi={10.1038/s41467-020-15237-5},
}
@article{UBHD-69257384,
  author={Valous, Nektarios A. and Popp, Ferdinand and Z{\"o}rnig, Inka and J{\"a}ger, Dirk and Charoentong, Pornpimol},
  title={Graph machine learning for integrated multi-omics analysis},
  year={2024},
  pages={205-211},
  language={eng},
  issn={1532-1827},
  volume={131},
  number={2},
  note={Gesehen am 30.09.2024},
  journal={British journal of cancer},
  doi={10.1038/s41416-024-02706-7},
}
@article{UBHD-68403540,
  author={Welters, Marij J. P. and Charoentong, Pornpimol},
  title={Intratumoral HPV16-specific T cells constitute a type I-oriented tumor microenvironment to improve survival in HPV16-driven oropharyngeal cancer},
  year={2018},
  pages={634-647},
  language={eng},
  issn={1557-3265},
  volume={24},
  number={3},
  note={Published Online First: October 10, 2017 ; Gesehen am 02.07.2019},
  journal={Clinical cancer research},
  doi={10.1158/1078-0432.CCR-17-2140},
}