@article{UBHD-68433355, author={Cardoso-Moreira, Margarida and Halbert, Jean and Valloton, Delphine and Velten, Britta and Chen, Chunyan and Shao, Yi and Liechti, Angélica and Ascenção, Kelly and Rummel, Coralie and Ovchinnikova, Svetlana and Mazin, Pavel V. and Xenarios, Ioannis and Harshman, Keith and Mort, Matthew and Cooper, David N. and Sandi, Carmen and Soares, Michael J. and Ferreira, Paula G. and Afonso, Sandra and Carneiro, Miguel and Turner, James M. A. and VandeBerg, John L. and Fallahshahroudi, Amir and Jensen, Per and Behr, R{\"u}diger and Lisgo, Steven and Lindsay, Susan and Khaitovich, Philipp and Huber, Wolfgang and Baker, Julie and Anders, Simon and Zhang, Yong E. and Kaessmann, Henrik}, title={Gene expression across mammalian organ development}, year={2019}, pages={505-509}, language={eng}, issn={1476-4687}, volume={571}, number={7766}, note={Gesehen am 26.09.2019}, journal={Nature}, doi={10.1038/s41586-019-1338-5}, } @article{UBHD-69240553, author={Deckert, Andreas and Anders, Simon and Morales, Ivonne and De Allegri, Manuela and Nguyen, Hoa Thi and Souares-Coutant, Aurélia and McMahon-R{\"o}ssle, Shannon A. and Meurer, Matthias and Burk, Robin and Lou, Dan and Brugnara, Lucia and Sand, Matthias and K{\"o}ppel, Lisa and Maier-Hein, Lena and Roß, Tobias and Adler, Tim and Brenner, Stephan and Dyer, Christopher and Herbst, Konrad and Ovchinnikova, Svetlana and Marx, Michael and Schnitzler, Paul and Knop, Michael and B{\"a}rnighausen, Till and Denkinger, Claudia M.}, title={Comparison of four active SARS-CoV-2 surveillance strategies in representative population sample points}, subtitle={two-factor factorial randomized controlled trial}, year={2023}, pages={1-21}, language={eng}, issn={2369-2960}, volume={9}, number={Artikel-ID e44204}, note={Gesehen am 05.08.2024}, journal={JMIR public health and surveillance}, doi={10.2196/44204}, } @article{UBHD-69291117, author={Deckert, Andreas and Anders, Simon and Morales, Ivonne and De Allegri, Manuela and Nguyen, Hoa Thi and Souares-Coutant, Aurélia and McMahon-R{\"o}ssle, Shannon A. and Meurer, Matthias and Burk, Robin and Lou, Dan and Brugnara, Lucia and Sand, Matthias and K{\"o}ppel, Lisa and Maier-Hein, Lena and Roß, Tobias and Adler, Tim and Brenner, Stephan and Dyer, Christopher and Herbst, Konrad and Ovchinnikova, Svetlana and Marx, Michael and Schnitzler, Paul and Knop, Michael and B{\"a}rnighausen, Till and Denkinger, Claudia M.}, title={Correction: Comparison of four active SARS-CoV-2 surveillance strategies in representative population sample points: two-factor factorial randomized controlled trial}, year={2024}, pages={e57203-1-e57203-2}, language={eng}, issn={2369-2960}, volume={10}, number={Artikel-ID e57203}, note={Online ver{\"o}ffentlicht: 16. Februar 2024 ; Gesehen am 15.01.2025}, journal={JMIR public health and surveillance}, doi={10.2196/57203}, } @article{UBHD-68751488, author={Deckert, Andreas and Anders, Simon and De Allegri, Manuela and Nguyen, Hoa Thi and Souares-Coutant, Aurélia and McMahon-R{\"o}ssle, Shannon A. and B{\"o}rner, Kathleen and Meurer, Matthias and Herbst, Konrad and Sand, Matthias and K{\"o}ppel, Lisa and Siems, Tobias and Brugnara, Lucia and Brenner, Stephan and Burk, Robin and Lou, Dan and Kirrmaier, Daniel and Duan, Yuanqiang and Ovchinnikova, Svetlana and Marx, Michael and Kr{\"a}usslich, Hans-Georg and Knop, Michael and B{\"a}rnighausen, Till and Denkinger, Claudia M.}, title={Effectiveness and cost-effectiveness of four different strategies for SARS-CoV-2 surveillance in the general population (CoV-Surv Study)}, subtitle={a structured summary of a study protocol for a cluster-randomised, two-factorial controlled trial}, year={2021}, pages={1-4}, language={eng}, issn={1468-6694 and 1745-6215}, volume={22}, number={Artikel-ID 39}, note={Gesehen am 22.06.2021}, journal={Trials}, doi={10.1186/s13063-020-04982-z}, } @article{UBHD-68872953, author={Deckert, Andreas and Anders, Simon and De Allegri, Manuela and Nguyen, Hoa Thi and Souares-Coutant, Aurélia and McMahon-R{\"o}ssle, Shannon A. and Meurer, Matthias and Burk, Robin and Sand, Matthias and K{\"o}ppel, Lisa and Maier-Hein, Lena and Roß, Tobias and Adler, Tim and Siems, Tobias and Brugnara, Lucia and Brenner, Stephan and Herbst, Konrad and Kirrmaier, Daniel and Duan, Yuanqiang and Ovchinnikova, Svetlana and B{\"o}rner, Kathleen and Marx, Michael and Kr{\"a}usslich, Hans-Georg and Knop, Michael and B{\"a}rnighausen, Till and Denkinger, Claudia M.}, title={Effectiveness and cost-effectiveness of four different strategies for SARS-CoV-2 surveillance in the general population (CoV-Surv Study)}, subtitle={study protocol for a two-factorial randomized controlled multi-arm trial with cluster sampling}, year={2021}, pages={1-9}, language={eng}, issn={1468-6694 and 1745-6215}, volume={22}, number={Artikel-ID 656}, note={Gesehen am 01.02.2022}, journal={Trials}, doi={10.1186/s13063-021-05619-5}, url={https://doi.org/10.1186/s13063-021-05619-5}, library={UB}, } @article{UBHD-69185971, author={Jakab, Moritz and Lee, Ki Hong and Uvarovskii, Alexey and Ovchinnikova, Svetlana and Kulkarni, Shubhada and Jakab, Sevinç and Rostalski, Till and Spegg, Carleen and Anders, Simon and Augustin, Hellmut}, title={Lung endothelium exploits susceptible tumor cell states to instruct metastatic latency}, year={2024}, pages={32 S.}, language={eng}, issn={2662-1347}, volume={5}, note={Gesehen am 27.02.2024}, journal={Nature cancer}, doi={10.1038/s43018-023-00716-7}, } @article{UBHD-69287420, author={Kremer, Lukas P. M. and Braun, Martina M. and Ovchinnikova, Svetlana and K{\"u}chenhoff, Leonie and Cerrizuela, Santiago and Martín-Villalba, Ana and Anders, Simon}, title={Analyzing single-cell bisulfite sequencing data with MethSCAn}, year={2024}, pages={23 S.}, language={eng}, issn={1548-7105}, volume={21}, note={Gesehen am 07.01.2025 ; Ver{\"o}ffentlicht: 31. Juli 2024}, journal={Nature methods}, doi={10.1038/s41592-024-02347-x}, } @article{UBHD-68713961, author={Ovchinnikova, Svetlana and Anders, Simon}, title={Exploring dimension-reduced embeddings with Sleepwalk}, year={2020}, pages={749-756}, language={eng}, issn={1549-5469}, volume={30}, number={5}, note={Gesehen am 18.03.2021}, journal={Genome research}, doi={10.1101/gr.251447.119}, } @article{UBHD-69217609, author={Ovchinnikova, Svetlana and Anders, Simon}, title={Simple but powerful interactive data analysis in R with R/LinekdCharts}, year={2024}, pages={1-17}, language={eng}, issn={1474-760X}, volume={25}, number={Artikel-ID 43}, note={Gesehen am 27.05.2024}, journal={Genome biology}, doi={10.1186/s13059-024-03164-3}, } @book{UBHD-68896269, author={Ovchinnikova, Svetlana}, title={Visual and interactive exploration of omics data}, address={Heidelberg}, year={2022}, pages={1 Online-Ressource (107 Seiten)}, language={eng}, school={Dissertation, Ruperto-Carola University of Heidelberg, 2021}, doi={10.11588/heidok.00031402}, url={https://nbn-resolving.org/urn:nbn:de:bsz:16-heidok-314023}, library={UB}, } @book{UBHD-68913226, author={Ovchinnikova, Svetlana}, organization={Universit{\"a}t Heidelberg}, title={Visual and interactive exploration of omics data}, address={Heidelberg}, year={2021}, pages={103 Seiten}, language={eng}, school={Dissertation, Ruperto-Carola University of Heidelberg, 2021}, library={UB [Signatur: 2022 U 408]}, } @article{UBHD-69147177, author={Rodríguez Montes, Leticia and Ovchinnikova, Svetlana and Yuan, Xuefei and Studer, Tania and Sarropoulos, Ioannis and Anders, Simon and Kaessmann, Henrik and Cardoso-Moreira, Margarida}, title={Sex-biased gene expression across mammalian organ development and evolution}, year={2023}, pages={1-13}, language={eng}, issn={1095-9203}, volume={382}, number={Artikel-ID 6670}, note={Gesehen am 28.11.2023}, journal={Science}, doi={10.1126/science.adf1046}, } @article{UBHD-68660324, author={Wang, Zhongyi and Leushkin, Evgeny and Liechti, Angélica and Ovchinnikova, Svetlana and M{\"o}ßinger, Katharina and Br{\"u}ning, Thoomke and Rummel, Coralie and Grutzner, Frank and Cardoso-Moreira, Margarida and Janich, Peggy and Gatfield, David and Diagouraga, Boubou and de Massy, Bernard and Gill, Mark E. and Peters, Antoine H. F. M. and Anders, Simon and Kaessmann, Henrik}, title={Transcriptome and translatome co-evolution in mammals}, year={2020}, pages={642-647}, language={eng}, issn={1476-4687}, volume={588}, number={7839}, note={Das PDF enth{\"a}lt einen Anhang von 22 Seiten ; Gesehen am 08.01.2021}, journal={Nature}, doi={10.1038/s41586-020-2899-z}, }