@article{UBHD-68581339,
  author={Ansari, Shariq S. and Sharma, Ashwini Kumar and Soni, Himanshu and Ali, Doaa M. and Tews, Bj{\"o}rn and K{\"o}nig, Rainer and Eibl, Hansj{\"o}rg and Berger, Martin R.},
  title={Induction of ER and mitochondrial stress by the alkylphosphocholine erufosine in oral squamous cell carcinoma cells},
  year={2018},
  pages={15 S.},
  language={eng},
  issn={2041-4889},
  volume={9(2018},
  note={Gesehen am 27.05.2020},
  journal={Cell death & disease},
  doi={10.1038/s41419-018-0342-2},
}
@article{UBHD-68654002,
  author={Aschoff, Moritz and Hotz-Wagenblatt, Agnes and Glatting, Karl-Heinz and Fischer, Matthias and Eils, Roland and K{\"o}nig, Rainer},
  title={SplicingCompass},
  subtitle={differential splicing detection using RNA-Seq data},
  year={2013},
  pages={1141-1148},
  language={eng},
  issn={1367-4811 and 1460-2059},
  volume={29},
  number={9},
  note={Gesehen am 26.10.2020},
  journal={Bioinformatics},
  doi={10.1093/bioinformatics/btt101},
}
@article{UBHD-68304254,
  author={Batra, Richa and Harder, Nathalie and Soons, Zita and J{\"a}ger-Schmidt, Christina and Lawerenz, Christian and Eils, Roland and Rohr, Karl and Westermann, Frank and K{\"o}nig, Rainer},
  title={Time-lapse imaging of neuroblastoma cells to determine cell fate upon gene knockdown},
  year={2012},
  pages={10 S.},
  language={eng},
  issn={1932-6203},
  volume={7(2012},
  note={Gesehen am 12.09.2018},
  journal={PLOS ONE},
  doi={10.1371/journal.pone.0050988},
}
@article{UBHD-68884467,
  author={Bauer, Tobias Hartmut and Eils, Roland and K{\"o}nig, Rainer},
  title={RIP - the regulatory interaction predictor},
  subtitle={a machine learning-based approach for predicting target genes of transcription factors},
  year={2011},
  pages={2239-2247},
  language={eng},
  issn={1367-4811 and 1460-2059},
  volume={27},
  number={16},
  note={Gesehen am 02.03.2022},
  journal={Bioinformatics},
  doi={10.1093/bioinformatics/btr366},
}
@article{UBHD-68311612,
  author={Costa, Barbara and Eils, Roland and K{\"o}nig, Rainer},
  title={STK25 protein mediates TrkA and CCM2 protein-dependent death in pediatric tumor cells of neural origin},
  year={2012},
  pages={29285-29289},
  language={eng},
  issn={1083-351X},
  volume={287},
  number={35},
  note={Gesehen am 04.10.2018},
  journal={The journal of biological chemistry},
  doi={10.1074/jbc.C112.345397},
}
@article{UBHD-67258512,
  author={Fatumo, Segun and Kitiporn Plaimas and Oswald, Marcus and Eils, Roland and K{\"o}nig, Rainer},
  title={Estimating novel potential drug targets of Plasmodium falciparum by analysing the metabolic network of knock-out strains in silico},
  year={2009},
  pages={351-358},
  language={eng},
  issn={1567-7257},
  volume={9},
  number={3},
  journal={Infection, genetics and evolution},
  doi={10.1016/j.meegid.2008.01.007},
}
@article{UBHD-69087626,
  author={Fischer, Matthias and Bauer, Tobias Hartmut and Oberth{\"u}r, Carl André and Hero, B. and Theissen, J. and Ehrich, M. and Spitz, R. and Eils, Roland and Westermann, Frank and Brors, Benedikt and K{\"o}nig, Rainer and Berthold, Frank},
  title={Integrated genomic profiling identifies two distinct molecular subtypes with divergent outcome in neuroblastoma with loss of chromosome 11q},
  year={2010},
  pages={865-875},
  language={eng},
  issn={1476-5594},
  volume={29},
  number={6},
  note={Online ver{\"o}ffentlicht am 9. November 2009 ; Gesehen am 20.06.2023},
  journal={Oncogene},
  doi={10.1038/onc.2009.390},
}
@article{UBHD-68698609,
  author={Gogolin, Sina and Batra, Richa and Harder, Nathalie and Ehemann, Volker and Paffhausen, Tobias and Diessl, Nicolle and Sagulenko, Vitaliya and Benner, Axel and Gade, Stephan and Nolte, Ingo and Rohr, Karl and K{\"o}nig, Rainer and Westermann, Frank},
  title={MYCN-mediated overexpression of mitotic spindle regulatory genes and loss of p53-p21 function jointly support the survival of tetraploid neuroblastoma cells},
  year={2013},
  pages={35-45},
  language={eng},
  issn={1872-7980},
  volume={331},
  number={1},
  note={Gesehen am 12.02.2020 ; First published: 24 November 2012},
  journal={Cancer letters},
  doi={10.1016/j.canlet.2012.11.028},
}
@article{UBHD-68616386,
  author={Harder, Nathalie and Batra, Richa and Diessl, Nicolle and Gogolin, Sina and Eils, Roland and Westermann, Frank and K{\"o}nig, Rainer and Rohr, Karl},
  title={Large-scale tracking and classification for automatic analysis of cell migration and proliferation, and experimental optimization of high-throughput screens of neuroblastoma cells},
  year={2015},
  pages={524-540},
  language={eng},
  issn={1552-4930},
  volume={87},
  number={6},
  note={Gesehen am 13.07.2020},
  journal={Cytometry},
  doi={10.1002/cyto.a.22632},
}
@article{UBHD-68972764,
  author={Henrich, Kai-Oliver and Bauer, Tobias Hartmut and Schulte, Johannes and Ehemann, Volker and Deubzer, Hedwig and Gogolin, Sina and Muth, Daniel and Fischer, Matthias and Benner, Axel and K{\"o}nig, Rainer and Schwab, Manfred and Westermann, Frank},
  title={CAMTA1, a 1p36 tumor suppressor candidate, inhibits growth and activates differentiation programs in neuroblastoma cells},
  year={2011},
  pages={3142-3151},
  language={eng},
  issn={1538-7445},
  volume={71},
  number={8 vom: Apr.},
  note={Gesehen am 12.10.2022},
  journal={Cancer research},
  doi={10.1158/0008-5472.CAN-10-3014},
}
@article{UBHD-67239766,
  author={Henrich, Kai-Oliver and Bauer, Tobias Hartmut and Schulte, Johannes and Ehemann, Volker and Deubzer, Hedwig and Gogolin, Sina and Muth, Daniel and Fischer, Matthias and Benner, Axel and K{\"o}nig, Rainer and Schwab, Manfred and Westermann, Frank},
  title={CAMTA1, a 1p36 tumor suppressor candidate, inhibits growth and activates differentiation programs in neuroblastoma cells},
  year={2011},
  pages={3142-3151},
  language={ger},
  issn={0008-5472},
  volume={71},
  number={8},
  journal={Cancer research},
}
@article{UBHD-69071576,
  author={Kitiporn Plaimas and Eils, Roland and K{\"o}nig, Rainer},
  title={Identifying essential genes in bacterial metabolic networks with machine learning methods},
  year={2010},
  pages={1-16},
  language={eng},
  issn={1752-0509},
  volume={4},
  note={Gesehen am 03.05.2023},
  journal={BMC systems biology},
  doi={10.1186/1752-0509-4-56},
}
@incollection{UBHD-68132527,
  author={Kitiporn Plaimas and Oswald, Marcus and Eils, Roland and K{\"o}nig, Rainer},
  title={Integrating genomic and transcriptomic data into graph based approaches for defining essential reactions in the metabolic network of Escherichia Coli},
  year={2007},
  pages={55-60},
  language={eng},
  note={Gesehen am 29.06.2017},
  booktitle={LWA 2007},
  editor={Hinneburg, Alexander},
}
@article{UBHD-68084678,
  author={Kitiporn Plaimas and Mallm, Jan-Philipp and Oswald, Marcus and Svara, Fabian and Sourjik, Victor and Eils, Roland and K{\"o}nig, Rainer},
  title={Machine learning based analyses on metabolic networks supports high-throughput knockout screens},
  year={2008},
  language={eng},
  issn={1752-0509},
  volume={2(2008) Artikel-Nr. 67},
  number={11 Seiten},
  note={Der korrekte Vorname von Dr. Mallm lautet Jan-Philipp ; Gesehen am 15.02.2017},
  journal={BMC systems biology},
  doi={10.1186/1752-0509-2-67},
}
@book{UBHD-9919612,
  author={K{\"o}nig, Rainer},
  title={Analyse der Struktur und Interaktion von Proteinen und anderen Biopolymeren},
  year={1999},
  pages={III, 155 S.},
  language={ger},
  school={Heidelberg, Univ., Diss., 1999},
  keywords={Proteinfaltung ; Biopolymere / Molekulardesign},
  library={UB [Signatur: 99 U 669]},
}
@article{UBHD-67298530,
  author={K{\"o}nig, Rainer and Oswald, Marcus and Seitz, Hanna and Sager, Sebastian and Reinelt, Gerhard and Eils, Roland},
  title={Discovering functional gene expression patterns in the metabolic network of Escherichia coli with wavelets transforms},
  year={2006},
  pages={14 S.},
  language={eng},
  issn={1471-2105},
  volume={7(2006) Art.-Nr. 119},
  number={14 S.},
  note={Gesehen am 11.02.2013},
  journal={BMC bioinformatics},
  doi={10.1186/1471-2105-7-119},
}
@book{UBHD-67965067,
  author={Kordaß, Theresa and Weber, Claudia and Oswald, Marcus and Bernhardt, Mathias and Novak, Daniel and Utikal, Jochen and Eichm{\"u}ller, Stefan B. and K{\"o}nig, Rainer},
  title={SOX5 is involved in balanced MITF regulation in human melanoma cells},
  publisher={BioMed Central},
  address={London},
  year={2016},
  pages={1 Online-Ressource},
  language={eng},
  note={Aus: BMC Medical Genomics, 9 (2016), Nr. 10. pp. 1-15. ISSN 1755-8794},
  url={https://nbn-resolving.org/urn:nbn:de:bsz:16-heidok-203535},
  library={UB},
}
@article{UBHD-68353667,
  author={Kordaß, Theresa and Weber, Claudia and Oswald, Marcus and Bernhardt, Mathias and Novak, Daniel and Utikal, Jochen and Eichm{\"u}ller, Stefan B. and K{\"o}nig, Rainer},
  title={SOX5 is involved in balanced MITF regulation in human melanoma cells},
  year={2016},
  pages={15 S.},
  language={eng},
  issn={1755-8794},
  volume={9(2016},
  note={Gesehen am 31.01.2019},
  journal={BMC medical genomics},
  doi={10.1186/s12920-016-0170-0},
}
@article{UBHD-68320108,
  author={Piro, Rosario M. and Eils, Roland and K{\"o}nig, Rainer},
  title={Disease-gene discovery by integration of 3D gene expression and transcription factor binding affinities},
  year={2013},
  pages={468-475},
  language={eng},
  issn={1367-4811 and 1460-2059},
  volume={29},
  number={4},
  note={24 December 2012 ; Gesehen am 23.10.2018},
  journal={Bioinformatics},
  doi={10.1093/bioinformatics/bts720},
}
@article{UBHD-67745274,
  author={Piro, Rosario M. and Wiesberg, Stefan and Oswald, Marcus and Eils, Roland and Reinelt, Gerhard and K{\"o}nig, Rainer},
  title={Network topology-based detection of differential gene regulation and regulatory switches in cell metabolism and signaling},
  year={2014},
  language={eng},
  issn={1752-0509},
  volume={8(2014) Artikel-Nr. 56},
  number={10 S.},
  journal={BMC systems biology},
  doi={10.1186/1752-0509-8-56},
}
@article{UBHD-69077070,
  author={Riehl, Astrid and Bauer, Tobias Hartmut and Brors, Benedikt and Busch, Hauke and Mark, Regina and Németh, Julia and Gebhardt, Christoffer and Bierhaus, Angelika and Nawroth, Peter Paul and Eils, Roland and K{\"o}nig, Rainer and Angel, Peter and Heß, Jochen},
  title={Identification of the Rage-dependent gene regulatory network in a mouse model of skin inflammation},
  year={2010},
  pages={1-13},
  language={eng},
  issn={1471-2164},
  volume={11},
  number={Artikel-ID 537},
  note={Gesehen am 17.05.2023},
  journal={BMC genomics},
  doi={10.1186/1471-2164-11-537},
}
@article{UBHD-67251376,
  author={Schramm, Gunnar and Wiesberg, Stefan and Oswald, Marcus and Reinelt, Gerhard and Eils, Roland and K{\"o}nig, Rainer},
  title={Analyzing the regulation of metabolic pathways in human breast cancer},
  year={2010},
  pages={10 S.},
  language={eng},
  issn={1755-8794},
  volume={3(2010) Artikel-Nr. 39},
  number={10 S.},
  journal={BMC medical genomics},
  doi={10.1186/1755-8794-3-39},
}
@article{UBHD-67257726,
  author={Schramm, Gunnar and Wiesberg, Stefan and Oswald, Marcus and Reinelt, Gerhard and Westermann, Frank and Eils, Roland and K{\"o}nig, Rainer},
  title={PathWave},
  subtitle={discovering patterns of differentially regulated enzymes in metabolic pathways},
  year={2010},
  pages={1225-1231},
  language={eng},
  issn={1367-4811 and 1460-2059},
  volume={26},
  number={9},
  journal={Bioinformatics},
  doi={10.1093/bioinformatics/btq113},
}
@article{UBHD-69091211,
  author={Schramm, Gunnar and Nandakumar, Kannabiran and K{\"o}nig, Rainer},
  title={Regulation patterns in signaling networks of cancer},
  year={2010},
  pages={1-12},
  language={eng},
  issn={1752-0509},
  volume={4},
  note={Gesehen am 29.06.2023},
  journal={BMC systems biology},
  doi={10.1186/1752-0509-4-162},
}
@article{UBHD-68573826,
  author={Sharma, Ashwini Kumar and Eils, Roland and K{\"o}nig, Rainer},
  title={Copy number alterations in enzyme-coding and cancer-causing genes reprogram tumor metabolism},
  year={2016},
  pages={4058-4067},
  language={eng},
  issn={1538-7445},
  volume={76},
  number={14},
  note={Gesehen am 06.05.2020},
  journal={Cancer research},
  doi={10.1158/0008-5472.CAN-15-2350},
}
@article{UBHD-69119021,
  author={Suratanee, Apichat and Rebhan, Ilka and Matula, Petr and Kumar, Anil and Kaderali, Lars and Rohr, Karl and Bartenschlager, Ralf and Eils, Roland and K{\"o}nig, Rainer},
  title={Detecting host factors involved in virus infection by observing the clustering of infected cells in siRNA screening images},
  year={2010},
  pages={i653-i658},
  language={eng},
  issn={1367-4811 and 1460-2059},
  volume={26},
  number={18 vom: Sept.},
  note={Gesehen am 06.09.2023},
  journal={Bioinformatics},
  doi={10.1093/bioinformatics/btq398},
}
@incollection{UBHD-67258511,
  author={Surmann, Eva Maria and Wiesberg, Stefan and Oswald, Marcus and Reinelt, Gerhard and Eils, Roland and K{\"o}nig, Rainer},
  title={Analyzing the regulation of metabolic pathways in human breast cancer},
  year={2009},
  pages={111-118},
  language={eng},
  booktitle={KDML 2009},
}
@article{UBHD-68876668,
  author={T{\"o}njes, Martje and Bărbuş, Sebastian Liviu and Park, Yoon Jung and Wei, Wang and Schlotter, Magdalena and Lindroth, Anders M. and Pleier, Sabrina Valesca and Bai, Alfa H. C. and Karra, Daniela and Piro, Rosario M. and Felsberg, J{\"o}rg and Addington, Adele and Lemke, Dieter and Weibrecht, Irene and Hovestadt, Volker and Rolli, Claudio G. and Campos, Benito and Turcan, Sevin and Sturm, Dominik and Witt, Hendrik and Chan, Timothy A. and Herold-Mende, Christel and Kemkemer, Ralf and K{\"o}nig, Rainer and Schmidt, Kathrin V. and Hull, William Edmund and Pfister, Stefan and Jugold, Manfred and Hutson, Susan M. and Plass, Christoph and Okun, J{\"u}rgen G. and Reifenberger, Guido and Lichter, Peter and Radlwimmer, Bernhard},
  title={BCAT1 promotes cell proliferation through amino acid catabolism in gliomas carrying wild-type IDH1},
  year={2013},
  pages={901-908},
  language={eng},
  issn={1546-170X},
  volume={19},
  number={7},
  note={Gesehen am 10.02.2022},
  journal={Nature medicine},
  doi={10.1038/nm.3217},
}