@article{UBHD-68657898,
  author={Abyzov, Alexej and Li, Shantao and Kim, Daniel Rhee and Mohiyuddin, Marghoob and St{\"u}tz, Adrian M. and Parrish, Nicholas F. and Mu, Xinmeng Jasmine and Clark, Wyatt and Chen, Ken and Hurles, Matthew and Korbel, Jan Oliver and Lam, Hugo Y. K. and Lee, Charles and Gerstein, Mark B.},
  title={Analysis of deletion breakpoints from 1,092 humans reveals details of mutation mechanisms},
  year={2015},
  pages={12 S.},
  language={eng},
  issn={2041-1723},
  volume={6(2015) Artikel-Nummer 7256},
  number={12 Seiten},
  note={Gesehen am 04.11.2020},
  journal={Nature Communications},
  doi={10.1038/ncomms8256},
}
@article{UBHD-68564574,
  author={Begemann, Matthias and Waszak, Sebastian M. and Robinson, Giles W. and J{\"a}ger, Natalie and Sharma, Tanvi and Knopp, Cordula and Kraft, Florian and Moser, Olga and Mynarek, Martin and Guerrini-Rousseau, Lea and Brugieres, Laurence and Varlet, Pascale and Pietsch, Torsten and Bowers, Daniel C. and Chintagumpala, Murali and Sahm, Felix and Korbel, Jan Oliver and Rutkowski, Stefan and Eggermann, Thomas and Gajjar, Amar and Northcott, Paul and Elbracht, Miriam and Pfister, Stefan and Kontny, Udo and Kurth, Ingo},
  title={Germline GPR161 mutations predispose to pediatric medulloblastoma},
  year={2019},
  pages={43-50},
  language={eng},
  issn={1527-7755},
  volume={38},
  number={1},
  note={Gesehen am 15.04.2020},
  journal={Journal of clinical oncology},
  doi={10.1200/JCO.19.00577},
}
@article{UBHD-68965888,
  author={Brocks, David and Assenov, Yassen and Minner, Sarah and Bogatyrëva, Olga and Simon, Ronald and Koop, Christina and Oakes, Christopher C. and Zucknick, Manuela and Lipka, Daniel and Weischenfeldt, Joachim and Feuerbach, Lars and Cowper-Sal-lari, Richard and Lupien, Mathieu and Brors, Benedikt and Korbel, Jan Oliver and Schlomm, Thorsten and Tanay, Amos and Sauter, Guido and Gerh{\"a}user, Clarissa and Plass, Christoph},
  title={Intratumor DNA methylation heterogeneity reflects clonal evolution in aggressive prostate cancer},
  year={2014},
  pages={798-806},
  language={eng},
  issn={2211-1247},
  volume={8},
  journal={Cell reports},
  doi={10.1016/j.celrep.2014.06.053},
}
@article{UBHD-69001060,
  author={Chunduri, Narendra Kumar and Menges, Paul and Zhang, Xiaoxiao and Wieland, Angela and Gotsmann, Vincent Leon and Mardin, Balca and Buccitelli, Christopher and Korbel, Jan Oliver and Willmund, Felix and Kschischo, Maik and Raeschle, Markus and Storchova, Zuzana},
  title={Systems approaches identify the consequences of monosomy in somatic human cells},
  year={2021},
  pages={1-17},
  language={eng},
  issn={2041-1723},
  volume={12},
  number={Artikel-ID 5576},
  note={Gesehen am 03.01.2023},
  journal={Nature Communications},
  doi={10.1038/s41467-021-25288-x},
}
@article{UBHD-68377942,
  author={Erkek, Serap and Johann, Pascal-David and Zapatka, Marc and Sturm, Dominik and Jones, David T. W. and Korshunov, Andrey and Wolf, Stephan and Mallm, Jan-Philipp and Witt, Olaf and Kulozik, Andreas and Korbel, Jan Oliver and Lichter, Peter and Eils, Roland and Chavez, Lukas and Pfister, Stefan and Kool, Marcel},
  editor={Northcott, Michael},
  title={Comprehensive analysis of chromatin states in atypical teratoid/rhabdoid tumor identifies diverging roles for SWI/SNF and polycomb in gene regulation},
  year={2019},
  pages={25 S.},
  language={eng},
  issn={1878-3686},
  volume={35(2019},
  note={Available online 27 December 2018 ; Gesehen am 08.05.2019},
  journal={Cancer cell},
  doi={10.1016/j.ccell.2018.11.014},
}
@article{UBHD-68764747,
  author={Eufinger, Jan and Korbel, Jan Oliver and Winkler, Eva C. and Kohlbacher, Oliver and Stegle, Oliver},
  title={Genomdaten FAIR und sicher teilen},
  subtitle={das Deutsche Humangenom-Ph{\"a}nom Archiv (GHGA) als Baustein der Nationalen Forschungsdateninfrastruktur},
  year={2021},
  pages={86-97},
  language={ger},
  issn={2626-7489},
  number={2},
  note={Gesehen am 29.07.2021},
  journal={Bausteine Forschungsdatenmanagement},
  doi={10.17192/bfdm.2021.2.8349},
}
@book{UBHD-68664284,
  author={Winkler, Eva C. and Idler, Irina and Beck, Katja and Brors, Benedikt and Cornelius, Kai and Dikow, Nicola and Fr{\"o}hling, Stefan and Glimm, Hanno and Herpel, Esther and Korbel, Jan Oliver and Lichter, Peter and Richter, Daniela and Schickhardt, Christoph and Tanner, Klaus and Wiemann, Stefan and Fleischer, Henrike},
  organization={Projektgruppe EURAT},
  title={Position paper on the release of raw genomic data to patients and study participants},
  publisher={Marsilius-Kolleg},
  address={Heidelberg},
  year={2020},
  pages={1 Online-Ressource (67 Seiten)},
  language={ger and eng},
  number={ARRAY(0x55df7ace8760)},
  series={Forum Marsilius-Kolleg},
  note={Gesehen am 23.11.2020},
  doi={10.11588/fmk.2020.0.76125},
  url={http://dx.doi.org/10.11588/fmk.2020.0.76125},
  library={UB},
}
@article{UBHD-68073746,
  author={George, Julie and Segura Wang, Maia and Korbel, Jan Oliver and Muley, Thomas and Hoffmann, Hans and Schnabel, Philipp Albert},
  title={Comprehensive genomic profiles of small cell lung cancer},
  year={2015},
  pages={47-53},
  language={eng},
  issn={1476-4687},
  volume={524},
  number={7563},
  note={Gesehen am 18.01.2017},
  journal={Nature},
  doi={10.1038/nature14664},
}
@article{UBHD-68374139,
  author={Gerh{\"a}user, Clarissa and Feuerbach, Lars and Assenov, Yassen and H{\"u}bschmann, Daniel and Kuryshev, Vladimir and Weichenhan, Dieter and Toth, Reka and Lutsik, Pavlo and Lawerenz, Christian and Eils, Roland and Schlesner, Matthias and Kalle, Christof von and S{\"u}ltmann, Holger and Brors, Benedikt and Plass, Christoph and Korbel, Jan Oliver},
  title={Molecular evolution of early-onset prostate cancer identifies molecular risk markers and clinical trajectories},
  year={2018},
  pages={996-1011.e8},
  language={eng},
  issn={1878-3686},
  volume={34},
  number={6},
  note={Gesehen am 29.03.2019},
  journal={Cancer cell},
  doi={10.1016/j.ccell.2018.10.016},
}
@article{UBHD-68703998,
  author={Greil, Johann and Rausch, Tobias and Giese, Thomas and Bandapalli, Obul Reddy and Daniel, Volker and Bekeredjian-Ding, Isabelle and St{\"u}tz, Adrian M. and Drees, Christoph and Roth, Susanne and Ruland, J{\"u}rgen and Korbel, Jan Oliver and Kulozik, Andreas},
  title={Whole-exome sequencing links caspase recruitment domain 11 (CARD11) inactivation to severe combined immunodeficiency},
  year={2013},
  pages={1376-1383.e3},
  language={eng},
  issn={1097-6825},
  volume={131},
  number={5},
  note={Gesehen am 25.02.2020},
  journal={The journal of allergy and clinical immunology},
  doi={10.1016/j.jaci.2013.02.012},
}
@article{UBHD-69295582,
  author={Grimes, Karen and Jeong, Hyobin and Amoah, Amanda and Xu, Nuo and Niemann, Julian and Raeder, Benjamin and Hasenfeld, Patrick and Stober, Catherine and Rausch, Tobias and Benito, Eva and Jann, Johann-Christoph and Nowak, Daniel and Emini, Ramiz and Hoenicka, Markus and Liebold, Andreas and Ho, Anthony Dick and Shuai, Shimin and Geiger, Hartmut and Sanders, Ashley D. and Korbel, Jan Oliver},
  title={Cell-type-specific consequences of mosaic structural variants in hematopoietic stem and progenitor cells},
  year={2024},
  pages={1134-1146},
  language={eng},
  issn={1546-1718},
  volume={56},
  number={6},
  note={Online ver{\"o}ffentlicht: 28. Mai 2024 ; Gesehen am 29.01.2025},
  journal={Nature genetics},
  doi={10.1038/s41588-024-01754-2},
}
@article{UBHD-68570567,
  author={Gr{\"o}bner, Susanne and Jones, Barbara Christine and Buchhalter, Ivo and Johann, Pascal-David and Balasubramanian, Gnana Prakash and Bender, Sebastian and Hutter, Barbara and Sturm, Dominik and Pfaff, Elke and H{\"u}bschmann, Daniel and Heinold, Michael and Eils, J{\"u}rgen and Kulozik, Andreas and Witt, Hendrik and Witt, Olaf and Tilburg, Cornelis M. van and Klingebiel, Thomas and Brors, Benedikt and Pajtler, Kristian Wilfried and Kool, Marcel and Korbel, Jan Oliver and Schlesner, Matthias and Eils, Roland and Jones, David T. W. and Lichter, Peter and Zapatka, Marc and Pfister, Stefan},
  title={Author correction: The landscape of genomic alterations across childhood cancers},
  year={2018},
  pages={E10-E10},
  language={eng},
  issn={1476-4687},
  volume={559},
  number={7714},
  note={Gesehen am 27.04.2020},
  journal={Nature},
  doi={10.1038/s41586-018-0167-2},
}
@article{UBHD-67747298,
  author={Gu, Lei and Kuner, Ruprecht and S{\"u}ltmann, Holger and Brors, Benedikt and Korbel, Jan Oliver and Plass, Christoph and Eils, Roland},
  title={BAZ2A (TIP5) is involved in epigenetic alterations in prostate cancer and its overexpression predicts disease recurrence},
  year={2015},
  pages={22-30},
  language={eng},
  issn={1546-1718},
  volume={47},
  number={1},
  note={Published online 8 December 2014 ; Im PDF sind 3 weitere Seiten "Online methods" ; Gesehen am 21.01.2021},
  journal={Nature genetics},
  doi={10.1038/ng.3165},
}
@article{UBHD-68421129,
  author={Haas, Jan and Mester, Stefan and Lai, Chung Lun Alan and Frese, Karen S. and Sedaghat-Hamedani, Farbod and Kayvanpour, Elham and Rausch, Tobias and Nietsch, Rouven and Boeckel, Jes-Niels and Carstensen, Avisha and V{\"o}lkers, Mirko and Amr, Ali and Holzer, Daniel Benjamin and Martins Bordalo, Diana and Oehler, Daniel and Weis, Tanja and Mereles, Derliz and Buß, Sebastian Johannes and Riechert, Eva and Korbel, Jan Oliver and Katus, Hugo and Meder, Benjamin},
  title={Genomic structural variations lead to dysregulation of important coding and non-coding RNA species in dilated cardiomyopathy},
  year={2018},
  pages={107-120},
  language={eng},
  issn={1757-4684},
  volume={10},
  number={1},
  note={Published online14 November 2017 ; Gesehen am 15.08.2019},
  journal={EMBO molecular medicine},
  doi={10.15252/emmm.201707838},
}
@incollection{UBHD-68665765,
  author={Habermann, Nina and Korbel, Jan Oliver},
  title={Eine Reflektion {\"u}ber das 1000 Genomes-Projekt},
  subtitle={Stellenwert und Mehrwert von humaner Diversit{\"a}t},
  year={2019},
  pages={113-118},
  language={ger},
  isbn={9783804739345},
  booktitle={"Andersartigkeit" und Identit{\"a}t in menschlichen Gesellschaften},
  editor={Roelcke, Volker and Schott, Heinz},
}
@article{UBHD-68312037,
  author={H{\"a}mmerling, Susanne Hedwig and Behnisch, Wolfgang and Doerks, Tobias and Korbel, Jan Oliver and Bork, Peer and Moog, Ute and Hentze, Sabine and Janssen, Johannes W. G. and Jauch, Anna and Bartram, Claus R. and Koch, Karin and Bandapalli, Obul Reddy and Kulozik, Andreas},
  title={A 15q24 microdeletion in transient myeloproliferative Disease (TMD) and acute megakaryoblastic leukaemia (AMKL) implicates PML and SUMO3 in the leukaemogenesis of TMD/AMKL},
  year={2012},
  pages={180-187},
  language={eng},
  issn={1365-2141},
  volume={157},
  number={2},
  note={Gesehen am 05.10.2018},
  journal={British journal of haematology},
  doi={10.1111/j.1365-2141.2012.09028.x},
}
@article{UBHD-68576360,
  author={Hezaveh, Kebria and Kloetgen, Andreas and Bernhart, Stephan H. and Mahapatra, Kunal Das and Lenze, Dido and Richter, Julia and Haake, Andrea and Bergmann, Anke K. and Brors, Benedikt and Burkhardt, Birgit and Claviez, Alexander and Drexler, Hans G. and Eils, Roland and Haas, Siegfried and Hoffmann, Steve and Karsch, Dennis and Klapper, Wolfram and Kleinheinz, Kortine and Korbel, Jan Oliver and Kretzmer, Helene and Kreuz, Markus and K{\"u}ppers, Ralf and Lawerenz, Christian and Leich, Ellen and Loeffler, Markus and Mantovani-Loeffler, Luisa and López, Cristina and McHardy, Alice and M{\"o}ller, Peter and Rohde, Marius and Rosenstiel, Philip and Rosenwald, Andreas and Schilhabel, Markus and Schlesner, Matthias and Scholz, Ingrid and Stadler, Peter F. and Stilgenbauer, Stephan and Sungalee, Stéphanie and Szczepanowski, Monika and Tr{\"u}mper, Lorenz and Weniger, Marc A. and Siebert, Reiner and Borkhardt, Arndt and Hummel, Michael and Hoell, Jessica I.},
  title={Alterations of microRNA and microRNA-regulated messenger RNA expression in germinal center B-cell lymphomas determined by integrative sequencing analysis},
  year={2016},
  pages={1380-1389},
  language={eng},
  issn={1592-8721},
  volume={101},
  number={11},
  note={Gesehen am 13.05.2020},
  journal={Haematologica},
  doi={10.3324/haematol.2016.143891},
}
@article{UBHD-68873825,
  author={H{\"u}bschmann, Daniel and Kleinheinz, Kortine and Wagener, Rabea and Bernhart, Stephan H. and López, Cristina and Toprak, Umut and Sungalee, Stéphanie and Ishaque, Naveed and Kretzmer, Helene and Kreuz, Markus and Waszak, Sebastian Martin and Paramasivam, Nagarajan and Ammerpohl, Ole and Aukema, Sietse M. and Beekman, Renée and Bergmann, Anke K. and Bieg, Matthias and Binder, Hans and Borkhardt, Arndt and Borst, Christoph and Brors, Benedikt and Bruns, Philipp and Carrillo de Santa Pau, Enrique and Claviez, Alexander and Doose, Gero and Haake, Andrea and Karsch, Dennis and Haas, Siegfried and Hansmann, Martin-Leo and Hoell, Jessica I. and Hovestadt, Volker and Huang, Bingding and Hummel, Michael and J{\"a}ger-Schmidt, Christina and Kerssemakers, Jules and Korbel, Jan Oliver and Kube, Dieter and Lawerenz, Christian and Lenze, Dido and Martens, Joost H. A. and Ott, German and Radlwimmer, Bernhard and Reisinger, Eva and Richter, Julia and Rico, Daniel and Rosenstiel, Philip and Rosenwald, Andreas and Schillhabel, Markus and Stilgenbauer, Stephan and Stadler, Peter F. and Martín-Subero, José I. and Szczepanowski, Monika and Warsow, Gregor and Weniger, Marc A. and Zapatka, Marc and Valencia, Alfonso and Stunnenberg, Hendrik G. and Lichter, Peter and M{\"o}ller, Peter and Loeffler, Markus and Eils, Roland and Klapper, Wolfram and Hoffmann, Steve and Tr{\"u}mper, Lorenz and K{\"u}ppers, Ralf and Schlesner, Matthias and Siebert, Reiner},
  title={Mutational mechanisms shaping the coding and noncoding genome of germinal center derived B-cell lymphomas},
  year={2021},
  pages={2002-2016},
  language={eng},
  issn={1476-5551},
  volume={35},
  number={7},
  note={Affiliations: Daniel H{\"u}bschmann, Kortine Kleinheinz, Rabea Wagener, Stephan H. Bernhart, Cristina López, Umut H. Toprak, Stephanie Sungalee, Naveed Ishaque, Helene Kretzmer, Markus Kreuz, Sebastian M. Waszak, Nagarajan Paramasivam, Ole Ammerpohl, Sietse M. Aukema, Renée Beekman, Anke K. Bergmann, Matthias Bieg, Hans Binder, Arndt Borkhardt, Christoph Borst, Benedikt Brors, Philipp Bruns, Enrique Carrillo de Santa Pau, Alexander Claviez, Gero Doose, Andrea Haake, Dennis Karsch, Siegfried Haas, Martin-Leo Hansmann, Jessica I. Hoell, Volker Hovestadt, Bingding Huang, Michael Hummel, Christina J{\"a}ger-Schmidt, Jules N.A. Kerssemakers, Jan O. Korbel, Dieter Kube, Chris Lawerenz, Dido Lenze, Joost H.A. Martens, German Ott, Bernhard Radlwimmer, Eva Reisinger, Julia Richter, Daniel Rico, Philip Rosenstiel, Andreas Rosenwald, Markus Schillhabel, Stephan Stilgenbauer, Peter F. Stadler, José I. Martín-Subero, Monika Szczepanowski, Gregor Warsow, Marc A. Weniger, Marc Zapatka, Alfonso Valencia, Hendrik G. Stunnenberg, Peter Lichter, Peter M{\"o}ller, Markus Loeffler, Roland Eils, Wolfram Klapper, Steve Hoffmann, Lorenz Tr{\"u}mper, ICGC MMML-Seq consortium, ICGC DE-Mining consortium, BLUEPRINT consortium, Ralf K{\"u}ppers, Matthias Schlesner, Reiner Siebert ; Gesehen am 03.02.2022},
  journal={Leukemia},
  doi={10.1038/s41375-021-01251-z},
}
@article{UBHD-69079325,
  author={Hudson, Thomas J. and Eils, Roland and Korbel, Jan Oliver and Korshunov, Andrey and Pfister, Stefan and Kalle, Christof von and Lichter, Peter and Brors, Benedikt and Radlwimmer, Bernhard},
  organization={International Cancer Genome Consortium},
  title={International network of cancer genome projects},
  year={2010},
  pages={993-998},
  language={eng},
  issn={1476-4687},
  volume={464},
  number={7291},
  note={The International Cancer Genome Consortium: Thomas J. Hudson (Chairperson), Warwick Anderson, Axel Aretz, Anna D. Barker, Cindy Bell, Rosa R. Bernabé, M. K. Bhan, Fabien Calvo, Iiro Eerola, Daniela S. Gerhard, Alan Guttmacher, Mark Guyer, Fiona M. Hemsley, Jennifer L. Jennings, David Kerr, Peter Klatt, Patrik Kolar, Jun Kusuda, David P. Lane, Frank Laplace, Youyong Lu, Gerd Nettekoven, Brad Ozenberger, Jane Peterson, T.S. Rao, Jacques Remacle, Alan J. Schafer, Tatsuhiro Shibata, Michael R. Stratton, Joseph G. Vockley, Koichi Watanabe, Huanming Yang, Matthew M. F. Yuen, Bartha M. Knoppers (Leader), Martin Bobrow, Anne Cambon-Thomsen, Lynn G. Dressler, Stephanie O. M. Dyke, Yann Joly, Kazuto Kato, Karen L. Kennedy, Pilar Nicolás, Michael J. Parker, Emmanuelle Rial-Sebbag, Carlos M. Romeo-Casabona, Kenna M. Shaw, Susan Wallace, Georgia L. Wiesner, Nikolajs Zeps, Peter Lichter (Leader), Andrew V. Biankin, Christian Chabannon, Lynda Chin, Bruno Clément, Enrique de Alava, Françoise Degos, Martin L. Ferguson, Peter Geary, D. Neil Hayes, Thomas J. Hudson, Amber L. Johns, Arek Kasprzyk, Hidewaki Nakagawa, Robert Penny, Miguel A. Piris, Rajiv Sarin, Aldo Scarpa, Tatsuhiro Shibata, Marc van de Vijver, P. Andrew Futreal (Leader), Hiroyuki Aburatani, Mónica Bayés, David D.L. Bowtell, Peter J. Campbell, Xavier Estivill, Daniela S. Gerhard, Sean M. Grimmond, Ivo Gut, Martin Hirst, Carlos López-Otín, Partha Majumder, Marco Marra, John D. McPherson, Hidewaki Nakagawa, Zemin Ning, Xose S. Puente, Yijun Ruan, Tatsuhiro Shibata, Michael R. Stratton, Hendrik G. Stunnenberg, Harold Swerdlow, Victor E. Velculescu, Richard K. Wilson, Hong H. Xue, Liu Yang, Paul T. Spellman (Leader), Gary D. Bader, Paul C. Boutros, Peter J. Campbell, Paul Flicek, Gad Getz, Roderic Guigó, Guangwu Guo, David Haussler, Simon Heath, Tim J. Hubbard, Tao Jiang, Steven M. Jones, Qibin Li, Nuria López-Bigas, Ruibang Luo, Lakshmi Muthuswamy, B. F. Francis Ouellette, John V. Pearson, Xose S. Puente, Victor Quesada, Benjamin J. Raphael, Chris Sander, Tatsuhiro Shibata, Terence P. Speed, Lincoln D. Stein, Joshua M. Stuart, Jon W. Teague, Yasushi Totoki, Tatsuhiko Tsunoda, Alfonso Valencia, David A. Wheeler, Honglong Wu, Shancen Zhao, Guangyu Zhou, Lincoln D. Stein (Leader), Roderic Guigó, Tim J. Hubbard, Yann Joly, Steven M. Jones, Arek Kasprzyk, Mark Lathrop, Nuria López-Bigas, B. F. Francis Ouellette, Paul T. Spellman, Jon W. Teague, Gilles Thomas, Alfonso Valencia, Teruhiko Yoshida, Karen L. Kennedy (Leader), Myles Axton, Stephanie O. M. Dyke, P. Andrew Futreal, Daniela S. Gerhard, Chris Gunter, Mark Guyer, Thomas J. Hudson, John D. McPherson, Linda J. Miller, Brad Ozenberger, Kenna M. Shaw, Arek Kasprzyk (Leader), Lincoln D. Stein (Leader), Junjun Zhang, Syed A. Haider, Jianxin Wang, Christina K. Yung, Anthony Cross, Yong Liang, Saravanamuttu Gnaneshan, Jonathan Guberman, Jack Hsu, Martin Bobrow (Leader), Don R. C. Chalmers, Karl W. Hasel, Yann Joly, Terry S. H. Kaan, Karen L. Kennedy, Bartha M. Knoppers, William W. Lowrance, Tohru Masui, Pilar Nicolás, Emmanuelle Rial-Sebbag, Laura Lyman Rodriguez, Catherine Vergely, Teruhiko Yoshida, Sean M. Grimmond (Leader), Andrew V. Biankin, David D. L. Bowtell, Nicole Cloonan, Anna deFazio, James R. Eshleman, Dariush Etemadmoghadam, Brooke A. Gardiner, James G. Kench, Aldo Scarpa, Robert L. Sutherland, Margaret A. Tempero, Nicola J. Waddell, Peter J. Wilson, John D. McPherson (Leader), Steve Gallinger, Ming-Sound Tsao, Patricia A. Shaw, Gloria M. Petersen, Debabrata Mukhopadhyay, Lynda Chin, Ronald A. DePinho, Sarah Thayer, Lakshmi Muthuswamy, Kamran Shazand, Timothy Beck, Michelle Sam, Lee Timms, Vanessa Ballin, Youyong Lu (Leader), Jiafu Ji, Xiuqing Zhang, Feng Chen, Xueda Hu, Guangyu Zhou, Qi Yang, Geng Tian, Lianhai Zhang, Xiaofang Xing, Xianghong Li, Zhenggang Zhu, Yingyan Yu, Jun Yu, Huanming Yang, Mark Lathrop (Leader), J{\"o}rg Tost, Paul Brennan, Ivana Holcatova, David Zaridze, Alvis Brazma, Lars Egevad, Egor Prokhortchouk, Rosamonde Elizabeth Banks, Mathias Uhlén, Anne Cambon-Thomsen, Juris Viksna, Fredrik Ponten, Konstantin Skryabin, Michael R. Stratton (Leader), P. Andrew Futreal, Ewan Birney, Ake Borg, Anne-Lise Børresen-Dale, Carlos Caldas, John A. Foekens, Sancha Martin, Jorge S. Reis-Filho, Andrea L. Richardson, Christos Sotiriou, Hendrik G. Stunnenberg, Gilles Thomas, Marc van de Vijver, Laura van’t Veer, Fabien Calvo (Leader), Daniel Birnbaum, Hélène Blanche, Pascal Boucher, Sandrine Boyault, Christian Chabannon, Ivo Gut, Jocelyne D. Masson-Jacquemier, Mark Lathrop, Iris Pauporté, Xavier Pivot, Anne Vincent-Salomon, Eric Tabone, Charles Theillet, Gilles Thomas, J{\"o}rg Tost, Isabelle Treilleux, Fabien Calvo (Leader), Paulette Bioulac-Sage, Bruno Clément, Thomas Decaens, Françoise Degos, Dominique Franco, Ivo Gut, Marta Gut, Simon Heath, Mark Lathrop, Didier Samuel, Gilles Thomas, The International Cancer Genome Consortium, Executive committee, Ethics and policy committee, Tissue and clinical annotation working group, Technologies working group, Bioinformatics analyses working group, Data coordination and management working group, data tiers and publications working group Data release, Data coordination centre, International data access committee, Cancer genome projects: Pancreatic cancer (ductal adenocarcinoma) and ovarian cancer (serous adenocarcinoma) (Australia), Pancreatic cancer (ductal adenocarcinomas) (Canada), Gastric cancer (intestinal- and diffuse-type) (China), Renal cancer (renal cell carcinoma; focus on but not limited to clear cell subtype) (European Union/France), Breast cancer (subtypes defined by an amplification of ER+ HER ductal-type) (European Union/United Kingdom), Breast cancer (subtype defined by an amplification of the HER2 gene) (France), Liver cancer (hepatocellular carcinoma; secondary to alcohol and adiposity) (France) ; Gesehen am 23.05.2023},
  journal={Nature},
  doi={10.1038/nature08987},
}
@article{UBHD-69228556,
  author={Jeong, Hyobin and Grimes, Karen and Rauwolf, Kerstin K. and Bruch, Peter-Martin and Rausch, Tobias and Hasenfeld, Patrick and Benito, Eva and Roider, Tobias and Sabarinathan, Radhakrishnan and Porubsky, David and Herbst, Sophie and Erarslan-Uysal, B{\"u}şra and Jann, Johann-Christoph and Marschall, Tobias and Nowak, Daniel and Bourquin, Jean-Pierre and Kulozik, Andreas and Dietrich, Sascha and Bornhauser, Beat and Sanders, Ashley D. and Korbel, Jan Oliver},
  title={Functional analysis of structural variants in single cells using Strand-seq},
  year={2023},
  pages={832-844},
  language={eng},
  issn={1546-1696},
  volume={41},
  number={6 vom: Juni},
  note={Online ver{\"o}ffentlicht: 24. November 2022 ; Gesehen am 01.07.2024},
  journal={Nature biotechnology},
  doi={10.1038/s41587-022-01551-4},
}
@article{UBHD-68259156,
  author={Korbel, Jan Oliver and McVean, Gil},
  title={An integrated map of genetic variation from 1,092 human genomes},
  year={2012},
  pages={56-65},
  language={eng},
  issn={1476-4687},
  volume={491},
  number={7422},
  note={Gesehen am 08.06.2018 ; The 1000 Genomes Project Consortium : corresponding author: Gil A. McVean : Production group: Jan Oliver Korbel [und weitere]},
  journal={Nature},
  doi={10.1038/nature11632},
}
@article{UBHD-68619626,
  author={Kovac, Michal and Blattmann, Claudia and Ribi, Sebastian and Smida, Jan and Mueller, Nikola S. and Engert, Florian and Castro-Giner, Francesc and Weischenfeldt, Joachim and Kovacova, Monika and Krieg, Andreas and Andreou, Dimosthenis and Tunn, Per-Ulf and D{\"u}rr, Hans Roland and Rechl, Hans and Schaser, Klaus-Dieter and Melcher, Ingo and Burdach, Stefan and Kulozik, Andreas and Specht, Katja and Heinimann, Karl and Fulda, Simone and Bielack, Stefan and Jundt, Gernot and Tomlinson, Ian and Korbel, Jan Oliver and Nathrath, Michaela and Baumhoer, Daniel},
  title={Exome sequencing of osteosarcoma reveals mutation signatures reminiscent of BRCA deficiency},
  year={2015},
  language={eng},
  issn={2041-1723},
  volume={6(2015) Artikel-Nummer 8940},
  number={9 Seiten},
  note={Gesehen am 22.07.2020},
  journal={Nature Communications},
  doi={10.1038/ncomms9940},
}
@article{UBHD-69276319,
  author={Krieg, Stephan and Rohde, Thomas and Rausch, Tobias and Butthof, Luise and Wendler-Link, Lena and Eckert, Christoph and Breuhahn, Kai and Galy, Bruno and Korbel, Jan Oliver and Billmann, Maximilian and Breinig, Marco and Tschaharganeh, Darjus-Felix},
  title={Mitoferrin2 is a synthetic lethal target for chromosome 8p deleted cancers},
  year={2024},
  pages={1-21},
  language={eng},
  issn={1756-994X},
  volume={16},
  number={Artikel-ID 83},
  note={Gesehen am 25.11.2024},
  journal={Genome medicine},
  doi={10.1186/s13073-024-01357-w},
}
@article{UBHD-68583325,
  author={Kunz, Joachim and Rausch, Tobias and Bandapalli, Obul Reddy and Eilers, Juliane and Richter-Pechańska, Paulina and Sch{\"u}ssele, Stephanie and Assenov, Yassen and St{\"u}tz, Adrian M. and Kirschner-Schwabe, Renate and Hof, Jana and Eckert, Cornelia and Stackelberg, Arend von and Schrappe, Martin and Stanulla, Martin and K{\"o}hler, Rolf and Avigad, Smadar and Elitzur, Sarah and Handgretinger, Rupert and Benes, Vladimir and Weischenfeldt, Joachim and Korbel, Jan Oliver and Muckenthaler, Martina and Kulozik, Andreas},
  title={Pediatric T-cell lymphoblastic leukemia evolves into relapse by clonal selection, acquisition of mutations and promoter hypomethylation},
  year={2015},
  pages={1442-1450},
  language={eng},
  issn={1592-8721},
  volume={100},
  number={11},
  note={Gesehen am 03.06.2020},
  journal={Haematologica},
  doi={10.3324/haematol.2015.129692},
}
@article{UBHD-68784067,
  author={Landry, Jonathan and Pyl, Paul-Theodor and Rausch, Tobias and Zichner, Thomas and Tekkedil, Manu M. and St{\"u}tz, Adrian M. and Jauch, Anna and Aiyar, Raeka and Pau, Gregoire and Delhomme, Nicolas and Gagneur, Julien and Korbel, Jan Oliver and Huber, Wolfgang and Steinmetz, Lars M.},
  title={The genomic and transcriptomic landscape of a HeLa cell line},
  year={2013},
  pages={1213-1224},
  language={eng},
  issn={2160-1836},
  volume={3},
  number={8 vom: Aug.},
  note={Published early online March 11, 2013 ; Gesehen am 28.09.2021},
  journal={G3: Genes, genomes, genetics},
  doi={10.1534/g3.113.005777},
}
@article{UBHD-69292890,
  author={Lepp{\"a}, Aino-Maija and Grimes, Karen and Jeong, Hyobin and Huang, Frank Y. and Andrades, Alvaro and Waclawiczek, Alexander and Boch, Tobias and Jauch, Anna and Renders, Simon and Stelmach, Patrick and M{\"u}ller-Tidow, Carsten and Karpova, Darja and Sohn, Markus and Gr{\"u}nschl{\"a}ger, Florian and Hasenfeld, Patrick and Benito Garagorri, Eva and Thiel, Vera and Dolnik, Anna and Rodriguez-Martin, Bernardo and Bullinger, Lars and Mrózek, Krzysztof and Eisfeld, Ann-Kathrin and Kr{\"a}mer, Alwin and Sanders, Ashley D. and Korbel, Jan Oliver and Trumpp, Andreas},
  title={Single-cell multiomics analysis reveals dynamic clonal evolution and targetable phenotypes in acute myeloid leukemia with complex karyotype},
  year={2024},
  pages={39 S.},
  language={eng},
  issn={1546-1718},
  volume={56},
  note={Gesehen am 21.01.2025},
  journal={Nature genetics},
  doi={10.1038/s41588-024-01999-x},
}
@article{UBHD-68458669,
  author={Lin, Charles Y. and Zapatka, Marc and Jones, Barbara Christine and Jones, David T. W. and Kool, Marcel and Buchhalter, Ivo and Johann, Pascal-David and Chavez, Lukas and Gr{\"o}schel, Stefan and Eils, Roland and Lichter, Peter and Pfister, Stefan and Kawauchi, Daisuke and Korbel, Jan Oliver},
  title={Active medulloblastoma enhancers reveal subgroup-specific cellular origins},
  year={2016},
  pages={57-62},
  language={eng},
  issn={1476-4687},
  volume={530},
  number={7588},
  note={Gesehen am 21.11.2019},
  journal={Nature},
  doi={10.1038/nature16546},
}
@article{UBHD-68613380,
  author={Li, Yilong and Roberts, Nicola D. and Wala, Jeremiah A. and Shapira, Ofer and Schumacher, Steven E. and Kumar, Kiran and Khurana, Ekta and Waszak, Sebastian Martin and Korbel, Jan Oliver and Haber, James E. and Imielinski, Marcin and Weischenfeldt, Joachim and Beroukhim, Rameen and Campbell, Peter J.},
  title={Patterns of somatic structural variation in human cancer genomes},
  year={2020},
  pages={112-121},
  language={eng},
  issn={1476-4687},
  volume={578},
  number={7793},
  note={Gesehen am 03.07.2020},
  journal={Nature},
  doi={10.1038/s41586-019-1913-9},
}
@article{UBHD-68730458,
  author={Llamazares Prada, Maria and Espinet, Elisa and Mijošek, Vedrana and Schwartz, Uwe and Lutsik, Pavlo and Tămaş, Raluca and Richter, Mandy and Behrendt, Annika and Pohl, Stephanie T. and Benz, Naja P. and Muley, Thomas and Warth, Arne and Heußel, Claus Peter and Winter, Hauke and Landry, Jonathan J. M. and Herth, Felix and Mertens, Tinne C. J. and Karmouty-Quintana, Harry and Koch, Ina and Benes, Vladimir and Korbel, Jan Oliver and Waszak, Sebastian Martin and Trumpp, Andreas and Wyatt, David M. and Stahl, Heiko F. and Plass, Christoph and Jurkowska, Renata Z.},
  title={Versatile workflow for cell type-resolved transcriptional and epigenetic profiles from cryopreserved human lung},
  year={2021},
  pages={1-18},
  language={eng},
  issn={2379-3708},
  volume={6},
  note={Gesehen am 29.07.2021},
  journal={JCI insight},
  doi={10.1172/jci.insight.140443},
}
@article{UBHD-69055063,
  author={López, Cristina and Schleußner, Nikolai and Bernhart, Stephan H. and Kleinheinz, Kortine and Sungalee, Stephanie and Sczakiel, Henrike L. and Kretzmer, Helene and Toprak, Umut and Glaser, Selina and Wagener, Rabea and Ammerpohl, Ole and Bens, Susanne and Giefing, Maciej and González Sánchez, Juan Carlos and Apic, Gordana and H{\"u}bschmann, Daniel and Janz, Martin and Kreuz, Markus and Mottok, Anja and Muller, Judith M. and Seufert, Julian and Hoffmann, Steve and Korbel, Jan Oliver and Russell, Robert B. and Schule, Roland and Trumper, Lorenz and Klapper, Wolfram and Radlwimmer, Bernhard and Lichter, Peter and Kuppers, Ralf and Schlesner, Matthias and Mathas, Stephan and Siebert, Reiner},
  title={Focal structural variants revealed by whole genome sequencing disrupt the histone demethylase KDM4C in B-cell lymphomas},
  year={2023},
  pages={543-554},
  language={eng},
  issn={1592-8721},
  volume={108},
  number={2 vom: Feb.},
  note={Vorver{\"o}ffentlicht: April 28, 2022 ; Gesehen am 23.03.2023},
  journal={Haematologica},
  doi={10.3324/haematol.2021.280005},
}
@article{UBHD-68639644,
  author={Mack, Stephen C. and J{\"a}ger, Natalie and Jones, David T. W. and Sill, Martin and Stark, Sebastian and Şeker-Cin, Huriye and Johann, Pascal-David and Bender, Silke and Milde, Till and Kulozik, Andreas and Deimling, Andreas von and Witt, Olaf and Kool, Marcel and Korbel, Jan Oliver and Eils, Roland and Lichter, Peter and Pfister, Stefan},
  title={Epigenomic alterations define lethal CIMP-positive ependymomas of infancy},
  year={2014},
  pages={445-453},
  language={eng},
  issn={1476-4687},
  volume={506},
  number={7489},
  note={Gesehen am 23.09.2020},
  journal={Nature},
  doi={10.1038/nature13108},
}
@book{UBHD-68143875,
  author={Molnár-Gábor, Fruzsina and L{\"u}ck, Rupert and Iakhnin, Sergei and Korbel, Jan Oliver},
  title={Computing patient data in the cloud},
  subtitle={practical and legal considerations for genetics and genomics research in Europe and internationally},
  publisher={BioMed Central},
  address={London},
  year={2017},
  pages={1 Online-Ressource (12 Seiten)},
  language={eng},
  note={Aus: Genome Medicine, 9 (2017), Nr. 58. pp. 1-12. ISSN 1756-994X},
  doi={10.1186/s13073-017-0449-6},
  url={https://nbn-resolving.org/urn:nbn:de:bsz:16-heidok-231289},
  library={UB},
}
@article{UBHD-68665748,
  author={Molnár-Gábor, Fruzsina and Korbel, Jan Oliver},
  title={Verarbeitung von Patientendaten in der Cloud},
  subtitle={die Freiheit translationaler Forschung und der Datenschutz in Europa},
  year={2016},
  pages={274-281},
  language={ger},
  issn={2192-5593},
  volume={6},
  number={6},
  journal={Zeitschrift f{\"u}r Datenschutz},
}
@article{UBHD-68938587,
  author={Molnár-Gábor, Fruzsina and Kaldowski, Lisa and Korbel, Jan Oliver},
  title={Verhaltenskodex f{\"u}r die Omics-Forschung},
  subtitle={ein Instrument nach Art. 40 DS-GVO als Element der Datenschutzregelung im GHGA-NFDI-Konsortium},
  year={2021},
  pages={313-319},
  language={ger},
  issn={2192-5593},
  volume={11},
  number={6},
  journal={Zeitschrift f{\"u}r Datenschutz},
  keywords={Europ{\"a}ische Union / Biotechnologie / Omics-Technologie / Forschungsdaten / Datenschutz},
}
@article{UBHD-68256448,
  author={Richter-Pechańska, Paulina and Kunz, Joachim and Bandapalli, Obul Reddy and Orlova, Elena and Korbel, Jan Oliver and Muckenthaler, Martina and Kulozik, Andreas},
  title={Identification of a genetically defined ultra-high-risk group in relapsed pediatric T-lymphoblastic leukemia},
  year={2017},
  language={eng},
  issn={2044-5385},
  volume={7(2017},
  note={Gesehen am 01.06.2018},
  journal={Blood cancer journal},
  doi={10.1038/bcj.2017.3},
}
@article{UBHD-68487097,
  author={Richter-Pechańska, Paulina and Kunz, Joachim and Assenov, Yassen and Muckenthaler, Martina and Korbel, Jan Oliver and Kulozik, Andreas},
  title={PDX models recapitulate the genetic and epigenetic landscape of pediatric T-cell leukemia},
  year={2018},
  pages={13 S.},
  language={eng},
  issn={1757-4684},
  volume={10(2018},
  note={Gesehen am 10.02.2020},
  journal={EMBO molecular medicine},
  doi={10.15252/emmm.201809443},
}
@article{UBHD-68563885,
  author={Robinson, Giles W. and Korbel, Jan Oliver and Jones, David T. W. and Lichter, Peter and Kool, Marcel and Pfister, Stefan},
  title={Risk-adapted therapy for young children with medulloblastoma (SJYC07)},
  subtitle={therapeutic and molecular outcomes from a multicentre, phase 2 trial},
  year={2018},
  pages={768-784},
  language={eng},
  issn={1474-5488},
  volume={19},
  number={6},
  note={Gesehen am 14.04.2020},
  journal={The lancet},
  doi={10.1016/S1470-2045(18)30204-3},
}
@article{UBHD-68652732,
  author={Roidos, Paris and Sungalee, Stéphanie and Benfatto, Salvatore and Serçin, {\"O}zdemirhan and St{\"u}tz, Adrian M. and Abdollahi, Amir and Mauer, Jan and Zenke, Frank T. and Korbel, Jan Oliver and Mardin, Balca R.},
  title={A scalable CRISPR/Cas9-based fluorescent reporter assay to study DNA double-strand break repair choice},
  year={2020},
  pages={15 S.},
  language={eng},
  issn={2041-1723},
  volume={11(2020) Artikel-Nummer 4077},
  number={15 Seiten},
  note={Gesehen am 22.10.2020},
  journal={Nature Communications},
  doi={10.1038/s41467-020-17962-3},
}
@article{UBHD-68251886,
  author={Schwartzentruber, Jeremy and Korshunov, Andrey and Jones, David T. W. and Sturm, Dominik and T{\"o}njes, Martje and Hovestadt, Volker and Kool, Marcel and Korbel, Jan Oliver and Kulozik, Andreas and Zapatka, Marc and Deimling, Andreas von and Witt, Hendrik and Milde, Till and Witt, Olaf and Lichter, Peter and Plass, Christoph and Pfister, Stefan},
  title={Driver mutations in histone H3.3 and chromatin remodelling genes in paediatric glioblastoma},
  year={2012},
  pages={226-231},
  language={eng},
  issn={1476-4687},
  volume={482},
  number={7384},
  note={Gesehen am 14.05.2018},
  journal={Nature},
  doi={10.1038/nature10833},
}
@article{UBHD-68590111,
  author={Stockklausner, Clemens and Raffel, Simon and Klermund, Julia and Bandapalli, Obul Reddy and Beier, Fabian and Br{\"u}mmendorf, Tim Henrik and B{\"u}rger, Friederike and Sauer, Sven and Hoffmann, Georg F. and Lorenz, Holger and Tagliaferri, Laura and Nowak, Daniel and Hofmann, Wolf-Karsten and B{\"u}rgermeister, Rebecca and Kerber, Carolin and Rausch, Tobias and Korbel, Jan Oliver and Luke, Brian and Trumpp, Andreas and Kulozik, Andreas},
  title={A novel autosomal recessive TERT T1129P mutation in a dyskeratosis congenita family leads to cellular senescence and loss of CD34+ hematopoietic stem cells not reversible by mTOR-inhibition},
  year={2015},
  pages={911-927},
  language={eng},
  issn={1945-4589},
  volume={7},
  number={11},
  note={Gesehen am 23.06.2020},
  journal={Aging},
}
@article{UBHD-68589995,
  author={Sudmant, Peter H. and Rausch, Tobias and Hsi-Yang Fritz, Markus and St{\"u}tz, Adrian M. and Meiers, Sascha and Schlattl, Andreas and Untergasser, Andreas and Zichner, Thomas and Korbel, Jan Oliver},
  title={An integrated map of structural variation in 2,504 human genomes},
  year={2015},
  pages={75-81},
  language={eng},
  issn={1476-4687},
  volume={526},
  number={7571},
  note={Gesehen am 23.06.2020},
  journal={Nature},
  doi={10.1038/nature15394},
}
@article{UBHD-68588486,
  author={Waszak, Sebastian Martin and Buchhalter, Ivo and Kerssemakers, Jules and J{\"a}ger, Natalie and Sharma, Tanvi and Rausch, Tobias and Kool, Marcel and Sturm, Dominik and Jones, David T. W. and Milde, Till and Witt, Olaf and Korshunov, Andrey and Lichter, Peter and Korbel, Jan Oliver and Pfister, Stefan},
  title={Germline elongator mutations in Sonic Hedgehog medulloblastoma},
  year={2020},
  pages={396-401},
  language={eng},
  issn={1476-4687},
  volume={580},
  number={7803},
  note={Gesehen am 18.06.2020},
  journal={Nature},
  doi={10.1038/s41586-020-2164-5},
}
@article{UBHD-68794519,
  author={Weischenfeldt, Joachim and Simon, Ronald and Feuerbach, Lars and Schlangen, Karin and Weichenhan, Dieter and Minner, Sarah and Wuttig, Daniela and Warnatz, Hans-J{\"o}rg and Stehr, Henning and Rausch, Tobias and J{\"a}ger, Natalie and Gu, Lei and Bogatyrëva, Olga and St{\"u}tz, Adrian M. and Claus, Rainer and Eils, J{\"u}rgen and Eils, Roland and Gerh{\"a}user, Clarissa and Huang, Po-Hsien and Hutter, Barbara and Kabbe, Rolf and Lawerenz, Christian and Radomski, Sylwester and Bartholomae, Cynthia C. and F{\"a}lth Savitski, Maria and Gade, Stephan and Schmidt, Manfred and Amschler, Nina and Haß, Thomas and Galal, Rami and Gjoni, Jovisa and Kuner, Ruprecht and Baer, Constance and Masser, Sawinee and Kalle, Christof von and Zichner, Thomas and Benes, Vladimir and Raeder, Benjamin and Mader, Malte and Amstislavskiy, Vyacheslav and Avci, Meryem and Lehrach, Hans and Parkhomchuk, Dmitri and Sultan, Marc and Burkhardt, Lia and Graefen, Markus and Huland, Hartwig and Kluth, Martina and Krohn, Antje and Sirma, H{\"u}seyin and Stumm, Laura and Steurer, Stefan and Grupp, Katharina and S{\"u}ltmann, Holger and Sauter, Guido and Plass, Christoph and Brors, Benedikt and Yaspo, Marie-Laure and Korbel, Jan Oliver and Schlomm, Thorsten},
  title={Integrative genomic analyses reveal an androgen-driven somatic alteration landscape in early-onset prostate cancer},
  year={2013},
  pages={159-170},
  language={eng},
  issn={1878-3686},
  volume={23},
  number={2},
  note={Gesehen am 28.10.2021},
  journal={Cancer cell},
  doi={10.1016/j.ccr.2013.01.002},
}