@article{UBHD-68736692, author={Alexandrov, Ludmil and Eils, Roland and Hutter, Barbara and J{\"a}ger, Natalie and Jones, David T. W. and Kool, Marcel and Northcott, Paul A. and Schlesner, Matthias and Lichter, Peter and Pfister, Stefan}, title={Corrigendum}, subtitle={Signatures of mutational processes in human cancer}, year={2013}, pages={258-258}, language={eng}, issn={1476-4687}, volume={502}, number={7470}, note={Gesehen am 11.05.2021}, journal={Nature}, doi={10.1038/nature12666}, } @article{UBHD-68736684, author={Alexandrov, Ludmil and Eils, Roland and Hutter, Barbara and J{\"a}ger, Natalie and Jones, David T. W. and Kool, Marcel and Northcott, Paul A. and Schlesner, Matthias and Lichter, Peter and Pfister, Stefan}, title={Signatures of mutational processes in human cancer}, year={2013}, pages={415-421}, language={eng}, issn={1476-4687}, volume={500}, number={7463}, note={Gesehen am 11.05.2021}, journal={Nature}, doi={10.1038/nature12477}, } @article{UBHD-68810716, author={Angeles, Arlou Kristina J. and Christopoulos, Petros and Yuan, Zhao and Bauer, Simone and Janke, Florian and Ogrodnik, Simon John and Reck, Martin and Schlesner, Matthias and Meister, Michael and Schneider, Marc and Dietz, Steffen and Stenzinger, Albrecht and Thomas, Michael and S{\"u}ltmann, Holger}, title={Early identification of disease progression in ALK-rearranged lung cancer using circulating tumor DNA analysis}, year={2021}, pages={1-12}, language={eng}, issn={2397-768X}, volume={5}, number={Artikel-ID 100}, note={Gesehen am 09.12.2021}, journal={npj precision oncology}, doi={10.1038/s41698-021-00239-3}, } @article{UBHD-68698516, author={Aslam, Muhammad and Kandasamy, Nirosiya and Ullah, Anwar and Paramasivam, Nagarajan and {\"O}zt{\"u}rk, Mehmet Ali and Naureen, Saima and Arshad, Abida and Badshah, Mazhar and Khan, Kafaitullah and Wajid, Muhammad and Abbasi, Rashda and Ilyas, Muhammad and Eils, Roland and Schlesner, Matthias and Wade, Rebecca C. and Ahmad, Nafees and von Engelhardt, Jakob}, title={Putative second hit rare genetic variants in families with seemingly GBA-associated Parkinson’s disease}, year={2021}, pages={10 S.}, language={eng}, issn={2056-7944}, volume={6(2021}, note={Gesehen am 12.02.2021}, journal={npj Genomic Medicine}, doi={10.1038/s41525-020-00163-8}, } @article{UBHD-68464167, author={Aslam, Muhammad and Eils, Roland and Schlesner, Matthias}, title={Segregation and potential functional impact of a rare stop-gain PABPC4L variant in familial atypical parkinsonism}, year={2019}, pages={1-8}, language={eng}, issn={2045-2322}, volume={9}, number={Artikel-ID 13576}, note={Gesehen am 05.12.2019}, journal={Scientific reports}, doi={10.1038/s41598-019-50102-6}, } @article{UBHD-68496158, author={Bandapalli, Obul Reddy and Paramasivam, Nagarajan and Giangiobbe, Sara and Witzens-Harig, Mathias and Schlesner, Matthias and Hemminki, Kari and F{\"o}rsti, Asta}, title={Whole genome sequencing reveals DICER1 as a candidate predisposing gene in familial Hodgkin lymphoma}, year={2018}, pages={2076-2078}, language={eng}, issn={1097-0215}, volume={143}, number={8}, note={Gesehen am 04.03.2020}, journal={International journal of cancer}, doi={10.1002/ijc.31576}, } @article{UBHD-69269359, author={Blanco Carmona, Enrique and Narayanan, Ashwin and Hernandez, Inmaculada and Nieto, Juan C. and Elosua-Bayes, Marc and Sun, Xueyuan and Schmidt, Claudia and Pamir, Necmettin and Ozduman, Koray and Herold-Mende, Christel and Pagani, Francesca and Cominelli, Manuela and Taranda, Julian and Wick, Wolfgang and Deimling, Andreas von and Poliani, Pietro Luigi and Rehli, Michael and Schlesner, Matthias and Heyn, Holger and Turcan, S̨evin}, title={Tumor heterogeneity and tumor-microglia interactions in primary and recurrent IDH1-mutant gliomas}, year={2023}, pages={1-20}, language={eng}, issn={2666-3791}, volume={4}, note={Gesehen am 04.11.2024}, journal={Cell reports}, doi={10.1016/j.xcrm.2023.101249}, } @article{UBHD-68965610, author={Bogeska, Ruzhica and Mikecin, Ana-Matea and Kaschutnig, Paul Emanuel and Fawaz, Malak and B{\"u}chler-Sch{\"a}ff, Marleen and Le, Duy and Ganuza, Miguel and Vollmer, Angelika and Paffenholz, Stella V. and Asada, Noboru and Rodríguez Correa, Esther and Frauhammer, Felix and Buettner, Florian and Ball, Melanie and Knoch, Julia and St{\"a}ble, Sina and Walter, Dagmar and Petri, Amelie and Carreño-Gonzalez, Martha J. and Wagner, Vinona and Brors, Benedikt and Haas, Simon and Lipka, Daniel and Essers, Marieke and Weru, Vivienn and Holland-Letz, Tim and Mallm, Jan-Philipp and Rippe, Karsten and Kr{\"a}mer, Stephan and Schlesner, Matthias and McKinney Freeman, Shannon and Florian, Maria Carolina and King, Katherine Y. and Frenette, Paul S. and Rieger, Michael A. and Milsom, Michael}, title={Inflammatory exposure drives long-lived impairment of hematopoietic stem cell self-renewal activity and accelerated aging}, year={2022}, pages={1273-1284.e8}, language={eng}, issn={1875-9777}, volume={29}, number={8}, journal={Cell stem cell}, doi={10.1016/j.stem.2022.06.012}, } @article{UBHD-69167428, author={Buschhorn, Lars and Odoni, Dorett I. and Geuder, Johanna and Odinius, Timo O. and Wagner, Celina V. and Jilg, Stefanie and H{\"o}ckendorf, Ulrike and Wahida, Adam and Schlesner, Matthias and Reiter, Andreas and Jawhar, Mohamad and Jost, Philipp}, title={Transcriptomic profiling does not refine mastocytosis diagnosis}, subtitle={letter to the editor}, year={2023}, pages={3125-3130}, language={eng}, issn={1592-8721}, volume={108}, number={11 vom: Nov.}, note={Gesehen am 30.01.2024}, journal={Haematologica}, doi={10.3324/haematol.2022.282617}, } @article{UBHD-68712164, author={Catalano, Calogerina and Paramasivam, Nagarajan and Blocka, Joanna and Giangiobbe, Sara and Huhn, Stefanie and Schlesner, Matthias and Weinhold, Niels and Goldschmidt, Hartmut and Bandapalli, Obul Reddy and Hemminki, Kari and F{\"o}rsti, Asta}, title={Characterization of rare germline variants in familial multiple myeloma}, year={2021}, pages={1-4}, language={eng}, issn={2044-5385}, volume={11}, number={Artikel-ID 33}, note={Gesehen am 03.11.2021}, journal={Blood cancer journal}, doi={10.1038/s41408-021-00422-6}, } @article{UBHD-68630860, author={Choukair, Daniela and Fredershausen, Birgit and Vick, Philipp and Hermanns, Pia and Weiß, Birgit and Paramasivam, Nagarajan and Schlesner, Matthias and Lornsen, Katharina and R{\"o}th, Ralph and Klutmann, Carina and Kreis, Jennifer and Hoffmann, Georg F. and Pohlenz, Joachim and Rappold, Gudrun and Bettendorf, Markus}, title={Identification of transient receptor potential channel 4-associated protein as a novel candidate gene causing congenital primary hypothyroidism}, year={2020}, pages={16-29}, language={eng}, issn={1663-2826}, volume={93}, number={1}, note={Gesehen am 25.08.2020}, journal={Hormone research in paediatrics}, doi={10.1159/000507114}, } @article{UBHD-68917216, author={Czéh, Melinda and St{\"a}ble, Sina and Kr{\"a}mer, Stephen and Tepe, Lena and Talyan, Sweta and Carrelha, Joana and Meng, Yiran and Heitplatz, Barbara and Schwabenland, Marius and Milsom, Michael and Plass, Christoph and Prinz, Marco and Schlesner, Matthias and Andrade-Navarro, Miguel A. and Nerlov, Claus and Jacobsen, Sten Eirik W. and Lipka, Daniel and Rosenbauer, Frank}, title={DNMT1 deficiency impacts on plasmacytoid dendritic cells in homeostasis and autoimmune disease}, year={2022}, pages={358-370}, language={eng}, issn={1550-6606}, volume={208}, number={2 vom: Jan.}, note={Gesehen am 11.05.2022}, journal={The journal of immunology}, doi={10.4049/jimmunol.2100624}, } @article{UBHD-68749880, author={Dentro, Stefan C. and Kleinheinz, Kortine and Schlesner, Matthias}, title={Characterizing genetic intra-tumor heterogeneity across 2,658 human cancer genomes}, year={2021}, pages={2239-2254.e39}, language={eng}, issn={1097-4172}, volume={184}, number={8}, note={Gesehen am 17.06.2021}, journal={Cell}, doi={10.1016/j.cell.2021.03.009}, } @article{UBHD-68874228, author={Dietz, Steffen and Christopoulos, Petros and Yuan, Zhao and Angeles, Arlou Kristina J. and Gu, Lisa and Volckmar, Anna-Lena and Ogrodnik, Simon and Janke, Florian and Dalle Fratte, Chiara and Zemojtel, Tomasz and Schneider, Marc and Kazdal, Daniel and Endris, Volker and Meister, Michael and Muley, Thomas and Cecchin, Erika and Reck, Martin and Schlesner, Matthias and Thomas, Michael and Stenzinger, Albrecht and S{\"u}ltmann, Holger}, title={Longitudinal therapy monitoring of ALK-positive lung cancer by combined copy number and targeted mutation profiling of cell-free DNA}, year={2020}, pages={1-10}, language={eng}, issn={2352-3964}, volume={62}, note={Gesehen am 08.02.2022}, journal={EBioMedicine}, doi={10.1016/j.ebiom.2020.103103}, } @article{UBHD-68329815, author={Dietz, Steffen and S{\"u}ltmann, Holger and Du, YueJun and Riediger, Anja Lisa and Volckmar, Anna-Lena and Stenzinger, Albrecht and Schlesner, Matthias and J{\"a}ger, Dirk and Hohenfellner, Markus and Duensing, Stefan and Gr{\"u}llich, Carsten and Pahernik, Sascha}, title={Patient-specific molecular alterations are associated with metastatic clear cell renal cell cancer progressing under tyrosine kinase inhibitor therapy}, year={2017}, pages={74049-74057}, language={eng}, issn={1949-2553}, volume={8}, number={43}, note={Gesehen am 19.11.2018}, journal={OncoTarget}, doi={10.18632/oncotarget.18200}, } @article{UBHD-68569170, author={Dietz, Steffen and Christopoulos, Petros and Gu, Lisa and Volckmar, Anna-Lena and Endris, Volker and Yuan, Zhao and Ogrodnik, Simon and Zemojtel, Tomasz and Heußel, Claus Peter and Schneider, Marc and Meister, Michael and Muley, Thomas and Reck, Martin and Schlesner, Matthias and Thomas, Michael and Stenzinger, Albrecht and S{\"u}ltmann, Holger}, title={Serial liquid biopsies for detection of treatment failure and profiling of resistance mechanisms in KLC1-ALK-rearranged lung cancer}, year={2019}, pages={10 S.}, language={eng}, issn={2373-2873}, volume={5(2019}, note={Gesehen am 22.04.2020}, journal={Cold Spring Harbor molecular case studies}, doi={10.1101/mcs.a004630}, } @article{UBHD-68649467, author={Espinet, Elisa and Gu, Zuguang and Imbusch, Charles and Giese, Nathalia and B{\"u}scher, Magdalena and Safavi, Mariam and Weisenburger, Silke and Klein, Corinna and Vogel, Vanessa and Falcone, Mattia and Insua-Rodríguez, Jacob and Reitberger, Manuel and Thiel, Vera and Kossi, Steffi O. and Muckenhuber, Alexander and Sarai, Karnjit and Lee, Alex YL and Backx, Elyne and Zarei, Soheila and Gaida, Matthias and Rodríguez Paredes, Manuel and Donato, Elisa and Yen, Hsi-Yu and Eils, Roland and Schlesner, Matthias and Pfarr, Nicole and Hackert, Thilo and Plass, Christoph and Brors, Benedikt and Steiger, Katja and Weichenhan, Dieter and Arda, H. Efsun and Rooman, Ilse and Kopp, Janel L. and Strobel, Oliver and Weichert, Wilko and Sprick, Martin and Trumpp, Andreas}, title={Aggressive PDACs show hypomethylation of repetitive elements and the execution of an intrinsic IFN program linked to a ductal cell-of-origin}, year={2021}, pages={638-659}, language={eng}, issn={2159-8290}, volume={11}, number={3}, note={Published first October 15, 2020 ; Gesehen am 16.10.2020}, journal={Cancer discovery}, doi={10.1158/2159-8290.CD-20-1202}, } @article{UBHD-68618393, author={Evers, Christina and Paramasivam, Nagarajan and Hinderhofer, Katrin and Fischer, Christine and Granzow, Martin and Schmidt-Bacher, Annette and Eils, Roland and Steinbeisser, Herbert and Schlesner, Matthias and Moog, Ute}, title={SIPA1L3 identified by linkage analysis and whole-exome sequencing as a novel gene for autosomal recessive congenital cataract}, year={2015}, pages={1627-1633}, language={eng}, issn={1476-5438}, volume={23}, number={12}, note={Gesehen am 20.07.2020}, journal={European journal of human genetics}, doi={10.1038/ejhg.2015.46}, } @article{UBHD-68732670, author={Gengenbacher, Nicolas and Singhal, Mahak and Mogler, Carolin and Hai, Ling and Milde, Laura and Abdul Pari, Ashik Ahmed and Besemfelder, Eva and Fricke, Claudine and Baumann, Daniel and Gehrs, Stephanie and Utikal, Jochen and Felcht, Moritz and Hu, Junhao and Schlesner, Matthias and Offringa, Rienk and Chintharlapalli, Sudhakar R. and Augustin, Hellmut}, title={Timed Ang2-targeted therapy identifies the Angiopoietin-tie pathway as key regulator of fatal lymphogenous metastasis}, year={2021}, pages={424-445}, language={eng}, issn={2159-8290}, volume={11}, number={2}, note={Gesehen am 03.05.2021 ; Published online first October 26, 2020}, journal={Cancer discovery}, doi={10.1158/2159-8290.CD-20-0122}, } @article{UBHD-68374139, author={Gerh{\"a}user, Clarissa and Feuerbach, Lars and Assenov, Yassen and H{\"u}bschmann, Daniel and Kuryshev, Vladimir and Weichenhan, Dieter and Toth, Reka and Lutsik, Pavlo and Lawerenz, Christian and Eils, Roland and Schlesner, Matthias and Kalle, Christof von and S{\"u}ltmann, Holger and Brors, Benedikt and Plass, Christoph and Korbel, Jan Oliver}, title={Molecular evolution of early-onset prostate cancer identifies molecular risk markers and clinical trajectories}, year={2018}, pages={996-1011.e8}, language={eng}, issn={1878-3686}, volume={34}, number={6}, note={Gesehen am 29.03.2019}, journal={Cancer cell}, doi={10.1016/j.ccell.2018.10.016}, } @article{UBHD-68613375, author={Gerstung, Moritz and Jolly, Clemency and Leshchiner, Ignaty and Dentro, Stefan C. and Gonzalez, Santiago and Rosebrock, Daniel and Mitchell, Thomas J. and Rubanova, Yulia and Anur, Pavana and Yu, Kaixian and Tarabichi, Maxime and Deshwar, Amit and Wintersinger, Jeff and Kleinheinz, Kortine and Vázquez-García, Ignacio and Haase, Kerstin and Jerman, Lara and Sengupta, Subhajit and Macintyre, Geoff and Malikic, Salem and Donmez, Nilgun and Livitz, Dimitri G. and Cmero, Marek and Demeulemeester, Jonas and Schumacher, Steven and Fan, Yu and Yao, Xiaotong and Lee, Juhee and Schlesner, Matthias and Boutros, Paul C. and Bowtell, David D. and Zhu, Hongtu and Getz, Gad and Imielinski, Marcin and Beroukhim, Rameen and Sahinalp, S. Cenk and Ji, Yuan and Peifer, Martin and Markowetz, Florian and Mustonen, Ville and Yuan, Ke and Wang, Wenyi and Morris, Quaid D. and Spellman, Paul T. and Wedge, David C. and Loo, Peter Van}, title={The evolutionary history of 2,658 cancers}, year={2020}, pages={122-128}, language={eng}, issn={1476-4687}, volume={578}, number={7793}, note={Das pdf beteht aus 23 Seiten ; Gesehen am 03.07.2020}, journal={Nature}, doi={10.1038/s41586-019-1907-7}, } @article{UBHD-69065196, author={Giesen, Nicola and Paramasivam, Nagarajan and Toprak, Umut and H{\"u}bschmann, Daniel and Xu, Jing and Uhrig, Sebastian and Samur, Mehmet and B{\"a}hr, Stella and Fr{\"o}hlich, Martina and Mughal, Sadaf Shabbir and Mai, Elias K. and Jauch, Anna and M{\"u}ller-Tidow, Carsten and Brors, Benedikt and Munshi, Nikhil C. and Goldschmidt, Hartmut and Weinhold, Niels and Schlesner, Matthias and Raab, Marc-Steffen}, title={Comprehensive genomic analysis of refractory multiple myeloma reveals a complex mutational landscape associated with drug resistance and novel therapeutic vulnerabilities}, year={2022}, pages={1891-1901}, language={eng}, issn={1592-8721}, volume={107}, number={8}, note={Gesehen am 13.04.2023}, journal={Haematologica}, doi={10.3324/haematol.2021.279360}, } @article{UBHD-68263864, author={Gießler, Klara Monika and Kleinheinz, Kortine and H{\"u}bschmann, Daniel and Balasubramanian, Gnana Prakash and Dubash, Taronish Dorab and Dieter, Sebastian M. and Siegl, Christine and Herbst, Friederike and Weber, Sarah and Hoffmann, Christopher M. and Fronza, Raffaele and Buchhalter, Ivo and Paramasivam, Nagarajan and Eils, Roland and Schmidt, Manfred and Kalle, Christof von and Schneider, Martin and Ulrich, Alexis and Scholl, Claudia and Fr{\"o}hling, Stefan and Weichert, Wilko and Brors, Benedikt and Schlesner, Matthias and Ball, Claudia R. and Glimm, Hanno}, title={Genetic subclone architecture of tumor clone-initiating cells in colorectal cancer}, year={2017}, pages={2073-2088}, language={eng}, issn={1540-9538}, volume={214}, number={7}, note={Published June 1, 2017 ; Gesehen am 20.06.2018}, journal={Journal of experimental medicine}, doi={10.1084/jem.20162017}, } @book{UBHD-68253576, author={Gu, Zuguang and Eils, Roland and Schlesner, Matthias}, title={EnrichedHeatmap}, subtitle={a R/Bioconductor package for comprehensive visualization of genomic signal associations}, publisher={BioMed Central ; Springer}, address={London ; Berlin ; Heidelberg}, year={2018}, pages={1 Online-Ressource (7 Seiten)}, language={eng}, note={Aus: BMC Genomics, 19 (2018), Nr. 234. pp. 1-7. ISSN 1471-2164 ; Published: 04 April 2018}, doi={10.1186/s12864-018-4625-x}, url={https://nbn-resolving.org/urn:nbn:de:bsz:16-heidok-242714}, library={UB}, } @article{UBHD-68618454, author={Gu, Zuguang and Gu, Lei and Eils, Roland and Schlesner, Matthias and Brors, Benedikt}, title={circlize implements and enhances circular visualization in R}, year={2014}, pages={2811-2812}, language={eng}, issn={1367-4811 and 1460-2059}, volume={30}, number={19}, note={Gesehen am 20.07.2020}, journal={Bioinformatics}, doi={10.1093/bioinformatics/btu393}, } @article{UBHD-68735157, author={Gu, Zuguang and Schlesner, Matthias and H{\"u}bschmann, Daniel}, title={cola}, subtitle={an R/Bioconductor package for consensus partitioning through a general framework}, year={2021}, pages={1-16}, language={eng}, issn={1362-4962}, volume={49}, note={Published online 4 December 2020 ; Gesehen am 29.06.2021}, journal={Nucleic acids research}, doi={10.1093/nar/gkaa1146}, } @article{UBHD-69226524, author={Hai, Ling and Hoffmann, Dirk C. and Wagener, Jan Robin and Domínguez Azorín, Daniel and Hausmann, David and Xie, Ruifan and Huppertz, Magnus-Carsten and Hiblot, Julien and Sievers, Philipp and Heuer, Sophie and Ito, Jakob and Cebulla, Gina and Kourtesakis, Alexandros and Kaulen, Leon D. and Ratliff, Miriam and Mandelbaum, Hannah and Jung, Erik and Jabali, Ammar and Horschitz, Sandra and Ernst, Kati J. and Reibold, Denise and Warnken, Uwe and Venkataramani, Varun and Will, Rainer and Suvà, Mario L. and Herold-Mende, Christel and Sahm, Felix and Winkler, Frank and Schlesner, Matthias and Wick, Wolfgang and Keßler, Tobias}, title={A clinically applicable connectivity signature for glioblastoma includes the tumor network driver CHI3L1}, year={2024}, pages={1-29}, language={eng}, issn={2041-1723}, volume={15}, number={Artikel-ID 968}, note={Gesehen am 26.06.2024}, journal={Nature Communications}, doi={10.1038/s41467-024-45067-8}, } @article{UBHD-69008112, author={Hausmann, David and Hoffmann, Dirk C. and Venkataramani, Varun and Jung, Erik and Horschitz, Sandra and Tetzlaff, Svenja and Jabali, Ammar and Hai, Ling and Keßler, Tobias and Azoŕin, Daniel D. and Heuer, Sophie and Kourtesakis, Alexandros and Sievers, Philipp and Habel, Antje and Breckwoldt, Michael O. and Karreman, Matthia A. and Ratliff, Miriam and Messmer, Julia M. and Yang, Yvonne and Reyhan, Ekin and Wendler, Susann and L{\"o}b, Cathrin and Mayer, Chanté and Figarella, Katherine and Osswald, Matthias and Solecki, Gergely and Sahm, Felix and Garaschuk, Olga and Kuner, Thomas and Koch, Philipp and Schlesner, Matthias and Wick, Wolfgang and Winkler, Frank}, title={Autonomous rhythmic activity in glioma networks drives brain tumour growth}, year={2023}, pages={179-186}, language={eng}, issn={1476-4687}, volume={613}, number={7942}, note={Online verf{\"u}gbar 14.12.2022 ; Gesehen am 17.01.2023}, journal={Nature}, doi={10.1038/s41586-022-05520-4}, } @article{UBHD-69291904, author={Heuer, Sophie and Burghaus, Ina and Gose, Maria and Keßler, Tobias and Sahm, Felix and Vollmuth, Philipp and Venkataramani, Varun and Hoffmann, Dirk C. and Schlesner, Matthias and Ratliff, Miriam and Hopf, Carsten and Herrlinger, Ulrich and Ricklefs, Franz Lennard and Bendszus, Martin and Krieg, Sandro and Wick, Antje and Wick, Wolfgang and Winkler, Frank}, title={PerSurge (NOA-30) phase II trial of perampanel treatment around surgery in patients with progressive glioblastoma}, year={2024}, pages={1-13}, language={eng}, issn={1471-2407}, volume={24}, note={Gesehen am 17.01.2024}, journal={BMC cancer}, doi={10.1186/s12885-024-11846-1}, } @article{UBHD-68576360, author={Hezaveh, Kebria and Kloetgen, Andreas and Bernhart, Stephan H. and Mahapatra, Kunal Das and Lenze, Dido and Richter, Julia and Haake, Andrea and Bergmann, Anke K. and Brors, Benedikt and Burkhardt, Birgit and Claviez, Alexander and Drexler, Hans G. and Eils, Roland and Haas, Siegfried and Hoffmann, Steve and Karsch, Dennis and Klapper, Wolfram and Kleinheinz, Kortine and Korbel, Jan Oliver and Kretzmer, Helene and Kreuz, Markus and K{\"u}ppers, Ralf and Lawerenz, Christian and Leich, Ellen and Loeffler, Markus and Mantovani-Loeffler, Luisa and López, Cristina and McHardy, Alice and M{\"o}ller, Peter and Rohde, Marius and Rosenstiel, Philip and Rosenwald, Andreas and Schilhabel, Markus and Schlesner, Matthias and Scholz, Ingrid and Stadler, Peter F. and Stilgenbauer, Stephan and Sungalee, Stéphanie and Szczepanowski, Monika and Tr{\"u}mper, Lorenz and Weniger, Marc A. and Siebert, Reiner and Borkhardt, Arndt and Hummel, Michael and Hoell, Jessica I.}, title={Alterations of microRNA and microRNA-regulated messenger RNA expression in germinal center B-cell lymphomas determined by integrative sequencing analysis}, year={2016}, pages={1380-1389}, language={eng}, issn={1592-8721}, volume={101}, number={11}, note={Gesehen am 13.05.2020}, journal={Haematologica}, doi={10.3324/haematol.2016.143891}, } @article{UBHD-68380557, author={H{\"o}fflin, Rouven and Lahrmann, Bernd and Warsow, Gregor and H{\"u}bschmann, Daniel and Spath, Cathleen and Walter, Britta and Chen, Xin and Hofer, Luisa and Macher-G{\"o}ppinger, Stephan and Tolstov, Yanis and Korzeniewski, Nina and Duensing, Anette and Gr{\"u}llich, Carsten and J{\"a}ger, Dirk and Perner, Sven Roger and Schoenberg, Gita and Nyarangi-Dix, Joanne and Isaac, Sanjay and Hatiboglu, Gencay and Teber, Dogu and Hadaschik, Boris and Pahernik, Sascha and Roth, Wilfried and Eils, Roland and Schlesner, Matthias and S{\"u}ltmann, Holger and Hohenfellner, Markus and Grabe, Niels and Duensing, Stefan}, title={Spatial niche formation but not malignant progression is a driving force for intratumoural heterogeneity}, year={2016}, pages={12 S.}, language={eng}, issn={2041-1723}, volume={7(2016) Artikel-Nummer ncomms11845}, number={12 Seiten}, note={Gesehen am 15.04.2019}, journal={Nature Communications}, doi={10.1038/ncomms11845}, } @article{UBHD-68301919, author={Horak, Peter and Heining, Christoph and Gr{\"o}schel, Stefan and Hutter, Barbara and Fr{\"o}hlich, Martina and H{\"u}bschmann, Daniel and Schlesner, Matthias and Eils, Roland and Richter, Daniela and Pf{\"u}tze, Katrin and Ge{\"o}rg, Christina and Meissburger, Bettina and Wolf, Stephan and Penzel, Roland and Herpel, Esther and Kirchner, Martina and Lier, Amelie and Endris, Volker and Singer, Stephan and Schirmacher, Peter and Stenzinger, Albrecht and Schlenk, Richard Friedrich and Brors, Benedikt and Kalle, Christof von and Glimm, Hanno and Fr{\"o}hling, Stefan}, title={Precision oncology based on omics data}, subtitle={the NCT Heidelberg experience}, year={2017}, pages={877-886}, language={eng}, issn={1097-0215}, volume={141}, number={5}, note={Gesehen am 04.09.2018}, journal={International journal of cancer}, doi={10.1002/ijc.30828}, } @article{UBHD-68588678, author={Horak, Peter and Weischenfeldt, Joachim and Amsberg, Gunhild von and Beyer, Burkhard and Sch{\"u}tte, Andreas and Uhrig, Sebastian and Gieldon, Laura and Klink, Barbara and Feuerbach, Lars and H{\"u}bschmann, Daniel and Kreutzfeldt, Simon and Heining, Christoph and Maier, Sebastian and Hutter, Barbara and Penzel, Roland and Schlesner, Matthias and Eils, Roland and Sauter, Guido and Stenzinger, Albrecht and Brors, Benedikt and Schr{\"o}ck, Evelin and Glimm, Hanno and Fr{\"o}hling, Stefan and Schlomm, Thorsten}, title={Response to olaparib in a PALB2 germline mutated prostate cancer and genetic events associated with resistance}, year={2019}, pages={10 S.}, language={eng}, issn={2373-2873}, volume={5(2019}, note={Gesehen am 18.06.2020}, journal={Cold Spring Harbor molecular case studies}, doi={10.1101/mcs.a003657}, } @article{UBHD-68980994, author={H{\"u}bers, Corinne and Abdul Pari, Ashik Ahmed and Grieshober, Denise and Petkov, Martin and Schmidt, Alexander and Meßmer, Tatjana and Heyer, Christian Moritz and Sch{\"o}lch, Sebastian and Kapel, Stephanie and Gengenbacher, Nicolas and Singhal, Mahak and Schieb, Benjamin and Fricke, Claudine and Will, Rainer D. and Remans, Kim and Utikal, Jochen and Reißfelder, Christoph and Schlesner, Matthias and Hodivala-Dilke, Kairbaan M. and Kersten, Sander and Goerdt, Sergij and Augustin, Hellmut and Felcht, Moritz}, title={Primary tumor-derived systemic nANGPTL4 inhibits metastasis}, year={2022}, pages={1-24}, language={eng}, issn={1540-9538}, volume={220}, note={Gesehen am 02.11.2022}, journal={Journal of experimental medicine}, doi={10.1084/jem.20202595}, } @article{UBHD-69134007, author={H{\"u}bschmann, Daniel and Jopp-Saile, Lea and Andresen, Carolin and Kr{\"a}mer, Stephen and Gu, Zuguang and Heilig, Christoph E. and Kreutzfeldt, Simon and Teleanu, Maria-Veronica and Fr{\"o}hling, Stefan and Eils, Roland and Schlesner, Matthias}, title={Analysis of mutational signatures with yet another package for signature analysis}, year={2021}, pages={314-331}, language={eng}, issn={1098-2264}, volume={60}, note={Online ver{\"o}ffentlicht: 22. November 2020 ; Gesehen am 26.10.2023}, journal={Genes, chromosomes & cancer}, doi={10.1002/gcc.22918}, } @article{UBHD-68873825, author={H{\"u}bschmann, Daniel and Kleinheinz, Kortine and Wagener, Rabea and Bernhart, Stephan H. and López, Cristina and Toprak, Umut and Sungalee, Stéphanie and Ishaque, Naveed and Kretzmer, Helene and Kreuz, Markus and Waszak, Sebastian Martin and Paramasivam, Nagarajan and Ammerpohl, Ole and Aukema, Sietse M. and Beekman, Renée and Bergmann, Anke K. and Bieg, Matthias and Binder, Hans and Borkhardt, Arndt and Borst, Christoph and Brors, Benedikt and Bruns, Philipp and Carrillo de Santa Pau, Enrique and Claviez, Alexander and Doose, Gero and Haake, Andrea and Karsch, Dennis and Haas, Siegfried and Hansmann, Martin-Leo and Hoell, Jessica I. and Hovestadt, Volker and Huang, Bingding and Hummel, Michael and J{\"a}ger-Schmidt, Christina and Kerssemakers, Jules and Korbel, Jan Oliver and Kube, Dieter and Lawerenz, Christian and Lenze, Dido and Martens, Joost H. A. and Ott, German and Radlwimmer, Bernhard and Reisinger, Eva and Richter, Julia and Rico, Daniel and Rosenstiel, Philip and Rosenwald, Andreas and Schillhabel, Markus and Stilgenbauer, Stephan and Stadler, Peter F. and Martín-Subero, José I. and Szczepanowski, Monika and Warsow, Gregor and Weniger, Marc A. and Zapatka, Marc and Valencia, Alfonso and Stunnenberg, Hendrik G. and Lichter, Peter and M{\"o}ller, Peter and Loeffler, Markus and Eils, Roland and Klapper, Wolfram and Hoffmann, Steve and Tr{\"u}mper, Lorenz and K{\"u}ppers, Ralf and Schlesner, Matthias and Siebert, Reiner}, title={Mutational mechanisms shaping the coding and noncoding genome of germinal center derived B-cell lymphomas}, year={2021}, pages={2002-2016}, language={eng}, issn={1476-5551}, volume={35}, number={7}, note={Affiliations: Daniel H{\"u}bschmann, Kortine Kleinheinz, Rabea Wagener, Stephan H. Bernhart, Cristina López, Umut H. Toprak, Stephanie Sungalee, Naveed Ishaque, Helene Kretzmer, Markus Kreuz, Sebastian M. Waszak, Nagarajan Paramasivam, Ole Ammerpohl, Sietse M. Aukema, Renée Beekman, Anke K. Bergmann, Matthias Bieg, Hans Binder, Arndt Borkhardt, Christoph Borst, Benedikt Brors, Philipp Bruns, Enrique Carrillo de Santa Pau, Alexander Claviez, Gero Doose, Andrea Haake, Dennis Karsch, Siegfried Haas, Martin-Leo Hansmann, Jessica I. Hoell, Volker Hovestadt, Bingding Huang, Michael Hummel, Christina J{\"a}ger-Schmidt, Jules N.A. Kerssemakers, Jan O. Korbel, Dieter Kube, Chris Lawerenz, Dido Lenze, Joost H.A. Martens, German Ott, Bernhard Radlwimmer, Eva Reisinger, Julia Richter, Daniel Rico, Philip Rosenstiel, Andreas Rosenwald, Markus Schillhabel, Stephan Stilgenbauer, Peter F. Stadler, José I. Martín-Subero, Monika Szczepanowski, Gregor Warsow, Marc A. Weniger, Marc Zapatka, Alfonso Valencia, Hendrik G. Stunnenberg, Peter Lichter, Peter M{\"o}ller, Markus Loeffler, Roland Eils, Wolfram Klapper, Steve Hoffmann, Lorenz Tr{\"u}mper, ICGC MMML-Seq consortium, ICGC DE-Mining consortium, BLUEPRINT consortium, Ralf K{\"u}ppers, Matthias Schlesner, Reiner Siebert ; Gesehen am 03.02.2022}, journal={Leukemia}, doi={10.1038/s41375-021-01251-z}, } @article{UBHD-68491160, author={Ishaque, Naveed and Abba, Mohammed L. and Patil, Nitin and Paramasivam, Nagarajan and H{\"u}bschmann, Daniel and Leupold, J{\"o}rg and Balasubramanian, Gnana Prakash and Kleinheinz, Kortine and Toprak, Umut and Hutter, Barbara and Benner, Axel and Kerssemakers, Jules and Marx, Alexander and Eils, J{\"u}rgen and Schlesner, Matthias and Eils, Roland and Brors, Benedikt and Allgayer, Heike}, title={Whole genome sequencing puts forward hypotheses on metastasis evolution and therapy in colorectal cancer}, year={2018}, pages={14 S.}, language={eng}, issn={2041-1723}, volume={9(2018) Artikel-Nummer 4782}, number={14 Seiten}, note={Gesehen am 19.02.2020}, journal={Nature Communications}, doi={10.1038/s41467-018-07041-z}, } @article{UBHD-68325157, author={Jabs, Julia and Park, Jeongbin and Jechow, Katharina and Kleinheinz, Kortine and Schneider, Marc and Meister, Michael and Spaich, Saskia and S{\"u}tterlin, Marc and Schlesner, Matthias and Eils, Roland and Conrad, Christian}, title={Screening drug effects in patient‐derived cancer cells links organoid responses to genome alterations}, year={2017}, pages={16 S.}, language={eng}, issn={1744-4292}, volume={13}, note={Gesehen am 06.11.2018}, journal={Molecular systems biology}, doi={10.15252/msb.20177697}, } @article{UBHD-68458798, author={Kim, Sang-Tae and Park, Jeongbin and Schlesner, Matthias}, title={Response to “Unexpected mutations after CRISPR-Cas9 editing in vivo”}, year={2018}, pages={239-240}, language={eng}, issn={1548-7105}, volume={15}, number={4}, note={Gesehen am 21.11.2019}, journal={Nature methods}, doi={10.1038/nmeth.4554}, } @article{UBHD-68656931, author={Kim-Wanner, Soo-Zin and Assenov, Yassen and Nair, Mridul Balakrishnan and Weichenhan, Dieter and Benner, Axel and Becker, Natalia and Landwehr, Katharina and Kuner, Ruprecht and S{\"u}ltmann, Holger and Esteller, Manel and Koch, Ina and Lindner, Michael and Meister, Michael and Thomas, Michael and Bieg, Matthias and Klingm{\"u}ller, Ursula and Schlesner, Matthias and Warth, Arne and Brors, Benedikt and Seifried, Erhard and B{\"o}nig, Halvard and Plass, Christoph and Risch, Angela and Muley, Thomas}, title={Genome-wide DNA methylation profiling in early stage I lung adenocarcinoma reveals predictive aberrant methylation in the promoter region of the long noncoding RNA PLUT}, subtitle={an exploratory study}, year={2020}, pages={1338-1350}, language={eng}, issn={1556-1380}, volume={15}, number={8}, note={Gesehen am 03.11.2020}, journal={Journal of thoracic oncology}, doi={10.1016/j.jtho.2020.03.023}, } @article{UBHD-68810701, author={Kirches, Elmar and Sahm, Felix and Korshunov, Andrey and Bluecher, Christina and Waldt, Natalie and Kropf, Siegfried and Schrimpf, Daniel and Sievers, Philipp and Stichel, Damian and Sch{\"u}ller, Ulrich and Schittenhelm, Jens Florian and Riemenschneider, Markus Johannes and Karajannis, Matthias A. and Perry, Arie and Pietsch, Torsten and Boekhoff, Svenja and Capper, David and Beck, Katja and Paramasivam, Nagarajan and Schlesner, Matthias and Brastianos, Priscilla K. and M{\"u}ller, Hermann L. and Pfister, Stefan and Mawrin, Christian}, title={Molecular profiling of pediatric meningiomas shows tumor characteristics distinct from adult meningiomas}, year={2021}, pages={873-886}, language={eng}, issn={1432-0533}, volume={142}, number={5}, journal={Acta neuropathologica}, doi={10.1007/s00401-021-02351-x}, } @article{UBHD-68495512, author={Kirches, Elmar and Sahm, Felix and Bl{\"u}cher, Christina and Boeckhoff, Svenja and Sch{\"u}ller, Ulrich and Schittenhelm, Jens Florian and Snuderl, Matija and Karajannis, Matthias A. and Perry, Arie and Pietsch, Torsten and M{\"u}ller, Hermann L. and Capper, David and Beck, Katja and Schlesner, Matthias and Kropf, Siegfried and Brastianos, Priscilla K. and Korshunov, Andrey and Pfister, Stefan and Mawrin, Christian}, title={Pediatric meningiomas are characterized by distinct methylation profiles different from adult meningiomas}, year={2019}, pages={ii83-ii84}, language={eng}, issn={1523-5866}, volume={Bd. 21.2019}, journal={Neuro-Oncology}, doi={10.1093/neuonc/noz036.084}, } @article{UBHD-68579653, author={Koşaloğlu, Zeynep and Z{\"o}rnig, Inka and Halama, Niels and Kaiser, Iris and Buchhalter, Ivo and Grabe, Niels and Eils, Roland and Schlesner, Matthias and Califano, Andrea and J{\"a}ger, Dirk}, title={Identification of immunotherapeutic targets by genomic profiling of rectal NET metastases}, year={2016}, pages={11 S.}, language={eng}, issn={2162-402X}, volume={5(2016}, note={Gesehen am 20.05.2020}, journal={OncoImmunology}, doi={10.1080/2162402X.2016.1213931}, } @article{UBHD-68455153, author={Kumar, Abhishek and Bandapalli, Obul Reddy and Paramasivam, Nagarajan and Giangiobbe, Sara and Diquigiovanni, Chiara and Bonora, Elena and Eils, Roland and Schlesner, Matthias and Hemminki, Kari and F{\"o}rsti, Asta}, title={Familial cancer variant prioritization pipeline version 2 (FCVPPv2) applied to a papillary thyroid cancer family}, year={2018}, pages={12 S.}, language={eng}, issn={2045-2322}, volume={8(2018) Artikel-Nummer 11635}, number={12 Seiten}, note={Gesehen am 14.11.2019}, journal={Scientific reports}, doi={10.1038/s41598-018-29952-z}, } @article{UBHD-68706476, author={Kumar, Abhishek and Paramasivam, Nagarajan and Bandapalli, Obul Reddy and Schlesner, Matthias and Chen, Tianhui and Sijmons, Rolf and Dymerska, Dagmara and Golebiewska, Katarzyna and Kuswik, Magdalena and Lubinski, Jan and Hemminki, Kari and F{\"o}rsti, Asta}, title={A rare large duplication of MLH1 identified in Lynch syndrome}, year={2021}, pages={1-7}, language={eng}, issn={1897-4287}, volume={19}, number={Artikel-ID 10}, note={Gesehen am 03.03.2021}, journal={Hereditary cancer in clinical practice}, doi={10.1186/s13053-021-00167-0}, } @article{UBHD-68313826, author={Lipka, Daniel and Witte, Tania and Toth, Reka and Yang, Jing and Wiesenfarth, Manuel and N{\"o}llke, Peter and Fischer, Alexandra and Brocks, David and Gu, Zuguang and Park, Jeongbin and Strahm, Brigitte and Wlodarski, Marcin and Yoshimi, Ayami and Claus, Rainer and L{\"u}bbert, Michael and Busch, Hauke and B{\"o}rries, Melanie and Hartmann, Mark and Sch{\"o}nung, Maximilian and Kilik, Umut and Langstein, Jens and Wierzbinska, Justyna A. and Pabst, Caroline and Garg, Swati and Catalá, Albert and Moerloose, Barbara de and Dworzak, Michael and Hasle, Henrik and Locatelli, Franco and Masetti, Riccardo and Schmugge Liner, Markus and Smith, Owen and Stary, Jan and Ussowicz, Marek and Heuvel-Eibrink, Marry M. van den and Assenov, Yassen and Schlesner, Matthias and Niemeyer, Charlotte and Flotho, Christian and Plass, Christoph}, title={RAS-pathway mutation patterns define epigenetic subclasses in juvenile myelomonocytic leukemia}, year={2017}, pages={1-14}, language={eng}, issn={2041-1723}, volume={8}, number={Artikel-ID 2126}, note={Gesehen am 10.10.2018}, journal={Nature Communications}, doi={10.1038/s41467-017-02177-w}, } @article{UBHD-68776052, author={Luiken, Sarah and Fraas, Angelika and Bieg, Matthias and Sugiyanto, Raisatun Nisa and Goeppert, Benjamin and Singer, Stephan and Pl{\"o}ger, Carolin and Warsow, Gregor and Marquardt, Jens and Sticht, Carsten and Torre, Carolina de la and Pusch, Stefan and Mehrabi, Arianeb and Gretz, Norbert and Schlesner, Matthias and Eils, Roland and Schirmacher, Peter and Longerich, Thomas and R{\"o}ssler, Stephanie}, title={NOTCH target gene HES5 mediates oncogenic and tumor suppressive functions in hepatocarcinogenesis}, year={2020}, pages={3128-3144}, language={eng}, issn={1476-5594}, volume={39}, number={15}, note={Gesehen am 02.09.2021}, journal={Oncogene}, doi={10.1038/s41388-020-1198-3}, url={https://doi.org/10.1038/s41388-020-1198-3}, library={UB}, } @article{UBHD-68682321, author={Lutsik, Pavlo and Baude, Annika and Mancarella, Daniela and {\"O}z, Aliye Simin and K{\"u}hn, Alexander and Toth, Reka and Hey, Joschka and Toprak, Umut and Lim, Jinyeong and Viet Hanh Nguyen and Jiang, Chao and Mayakonda Thippeswamy, Anand and Hartmann, Mark and Rosemann, Felix and Breuer, Kersten and Vonficht, Dominik and Gr{\"u}nschl{\"a}ger, Florian and Lee, Suman and Schuhmacher, Maren Kirstin and Kusevic, Denis and Jauch, Anna and Weichenhan, Dieter and Zustin, Jozef and Schlesner, Matthias and Haas, Simon and Park, Joo Hyun and Park, Yoon Jung and Oppermann, Udo and Jeltsch, Albert and Haller, Florian and Fellenberg, J{\"o}rg and Lindroth, Anders M. and Plass, Christoph}, title={Globally altered epigenetic landscape and delayed osteogenic differentiation in H3.3-G34W-mutant giant cell tumor of bone}, year={2020}, pages={16 S.}, language={eng}, issn={2041-1723}, volume={11(2020) Artikel-Nummer 5414}, number={16 Seiten}, note={Gesehen am 21.01.2021}, journal={Nature Communications}, doi={10.1038/s41467-020-18955-y}, } @article{UBHD-68906967, author={Miao, Beiping and Skopelitou, Diamanto and Srivastava, Aayushi and Giangiobbe, Sara and Dymerska, Dagmara and Paramasivam, Nagarajan and Kumar, Abhishek and Kuświk, Magdalena and Kluźniak, Wojciech and Paszkowska-Szczur, Katarzyna and Schlesner, Matthias and Lubinski, Jan and Hemminki, Kari and F{\"o}rsti, Asta and Bandapalli, Obul Reddy}, title={Whole-exome sequencing identifies a novel germline variant in PTK7 gene in familial colorectal cancer}, year={2022}, pages={1-20}, language={eng}, issn={1422-0067 and 1661-6596}, volume={23}, note={Gesehen am 12.04.2022 ; This article belongs to the Special Issue Linking Genomic Changes with Cancer in the NGS Era}, journal={International journal of molecular sciences}, doi={10.3390/ijms23031295}, } @article{UBHD-68680788, author={Narayanan, Ashwin and Blanco Carmona, Enrique and Demirdizen, Engin and Sun, Xueyuan and Herold-Mende, Christel and Schlesner, Matthias and Turcan, S̨evin}, title={Nuclei isolation from fresh frozen brain tumors for single-nucleus RNA-seq and ATAC-seq}, year={2020}, pages={?}, language={eng}, issn={1940-087X}, note={Enth{\"a}lt auch Textversion ; Gesehen am 18.01.2021 ; Wissenschaftlicher Film. Deutschland. 2020}, journal={JoVE}, doi={10.3791/61542}, } @article{UBHD-69154862, author={Niazi, Yasmeen and Paramasivam, Nagarajan and Blocka, Joanna and Kumar, Abhishek and Huhn, Stefanie and Schlesner, Matthias and Weinhold, Niels and Sijmons, Rolf and De Jong, Mirjam and Durie, Brian and Goldschmidt, Hartmut and Hemminki, Kari and F{\"o}rsti, Asta}, title={Investigation of rare non-coding variants in familial multiple myeloma}, year={2023}, pages={1-19}, language={eng}, issn={2073-4409}, volume={12}, note={Gesehen am 19.12.2023}, journal={Cells}, doi={10.3390/cells12010096}, } @article{UBHD-68480336, author={Paramasivam, Nagarajan and H{\"u}bschmann, Daniel and Toprak, Umut and Ishaque, Naveed and Neidert, Marian Christoph and Schrimpf, Daniel and Stichel, Damian and Reuss, David and Sievers, Philipp and Reinhardt, Annekathrin and Wefers, Annika K. and Jones, David T. W. and Gu, Zuguang and Werner, Johannes and Uhrig, Sebastian and Wirsching, Hans-Georg and Schick, Matthias and Bewerunge-Hudler, Melanie and Beck, Katja and Brehmer, Stefanie and Urbschat, Steffi and Seiz-Rosenhagen, Marcel and H{\"a}nggi, Daniel and Herold-Mende, Christel and Ketter, Ralf and Eils, Roland and Ram, Zvi and Pfister, Stefan and Wick, Wolfgang and Weller, Michael and Grossmann, Rachel and Deimling, Andreas von and Schlesner, Matthias and Sahm, Felix}, title={Mutational patterns and regulatory networks in epigenetic subgroups of meningioma}, year={2019}, pages={295-308}, language={eng}, issn={1432-0533}, volume={138}, number={2}, note={Received: 9 August 2018 ; Gesehen am 24.01.2020}, journal={Acta neuropathologica}, doi={10.1007/s00401-019-02008-w}, } @article{UBHD-68763863, author={Park, Jeongbin and Choi, Wonyl and Tiesmeyer, Sebastian and Long, Brian and Borm, Lars E. and Garren, Emma and Nguyen, Thuc Nghi and Tasic, Bosiljka and Codeluppi, Simone and Graf, Tobias and Schlesner, Matthias and Stegle, Oliver and Eils, Roland and Ishaque, Naveed}, title={Author correction: Cell segmentation-free inference of cell types from in situ transcriptomics data}, year={2021}, pages={1}, language={eng}, issn={2041-1723}, volume={12(2021) vom: 28. Juni}, number={Artikel-ID 4103}, note={Gesehen am 27.07.2021}, journal={Nature Communications}, doi={10.1038/s41467-021-24405-0}, } @article{UBHD-68763841, author={Park, Jeongbin and Choi, Wonyl and Tiesmeyer, Sebastian and Long, Brian and Borm, Lars E. and Garren, Emma and Nguyen, Thuc Nghi and Tasic, Bosiljka and Codeluppi, Simone and Graf, Tobias and Schlesner, Matthias and Stegle, Oliver and Eils, Roland and Ishaque, Naveed}, title={Cell segmentation-free inference of cell types from in situ transcriptomics data}, year={2021}, pages={1-13}, language={eng}, issn={2041-1723}, volume={12(2021) vom: 10. Juni}, number={Artikel-ID 3545}, note={Gesehen am 27.07.2021}, journal={Nature Communications}, doi={10.1038/s41467-021-23807-4}, } @article{UBHD-69188071, author={Patel, Areeba and Kardo, Helin and Payne, Alexander and Krause, Elena and Sievers, Philipp and Schoebe, Natalie and Schrimpf, Daniel and Blume, Christina and Stichel, Damian and Holmes, Nadine and Euskirchen, Philipp and Hench, J{\"u}rgen and Frank, Stephan and Goidts, Violaine and Ratliff, Miriam and Etminan, Nima and Unterberg, Andreas and Dieterich, Christoph and Herold-Mende, Christel and Pfister, Stefan and Wick, Wolfgang and Loose, Matthew and Deimling, Andreas von and Sill, Martin and Jones, David T. W. and Schlesner, Matthias and Sahm, Felix}, title={Rapid-CNS2: rapid comprehensive adaptive nanopore-sequencing of CNS tumors, a proof-of-concept study}, subtitle={correspondence}, year={2022}, pages={609-612}, language={eng}, issn={1432-0533}, volume={143}, number={5}, note={Gesehen am 05.03.2024}, journal={Acta neuropathologica}, doi={10.1007/s00401-022-02415-6}, } @article{UBHD-69006827, author={Peterziel, Heike and Jamaladdin, Nora and ElHarouni, Dina and Gerloff, Xenia F. and Herter, Sonja and Fiesel, Petra and Berker, Yannick and Blattner-Johnson, Mirjam and Schramm, Kathrin and Jones, Barbara Christine and Reuss, David and Turunen, Laura and Friedenauer, Aileen and Holland-Letz, Tim and Sill, Martin and Weiser, Lena and Previti, A. Christopher and Balasubramanian, Gnanaprakash and Gerber, Nicolas U. and Gojo, Johannes and Hutter, Caroline and Øra, Ingrid and Lohi, Olli and Kattamis, Antonis and de Wilde, Bram and Westermann, Frank and Tippelt, Stephan and Graf, Norbert and Nathrath, Michaela and Sparber-Sauer, Monika and Sehested, Astrid and Kramm, Christof M. and Dirksen, Uta and Kallioniemi, Olli and Pfister, Stefan and Tilburg, Cornelis M. van and Jones, David T. W. and Saarela, Jani and Pieti{\"a}inen, Vilja and J{\"a}ger, Natalie and Schlesner, Matthias and Kopp-Schneider, Annette and Oppermann, Sina and Milde, Till and Witt, Olaf and Oehme, Ina}, title={Drug sensitivity profiling of 3D tumor tissue cultures in the pediatric precision oncology program INFORM}, year={2022}, pages={1-17}, language={eng}, issn={2397-768X}, volume={6}, number={Artikel-ID 94}, note={Gesehen am 17.01.2023}, journal={npj precision oncology}, doi={10.1038/s41698-022-00335-y}, } @article{UBHD-68936577, author={Radke, Josefine and Ishaque, Naveed and Koll, Randi and Gu, Zuguang and Schumann, Elisa and Sieverling, Lina and Uhrig, Sebastian and H{\"u}bschmann, Daniel and Toprak, Umut and López, Cristina and Hostench, Xavier Pastor and Borgoni, Simone and Juraeva, Dilafruz and Pritsch, Fabienne and Paramasivam, Nagarajan and Balasubramanian, Gnana Prakash and Schlesner, Matthias and Sahay, Shashwat and Weniger, Marc and Pehl, Debora and Radbruch, Helena and Osterloh, Anja and Korfel, Agnieszka and Misch, Martin and Onken, Julia and Faust, Katharina and Vajkoczy, Peter and Moskopp, Dag and Wang, Yawen and J{\"o}dicke, Andreas and Tr{\"u}mper, Lorenz and Anagnostopoulos, Ioannis and Lenze, Dido and K{\"u}ppers, Ralf and Hummel, Michael and Schmitt, Clemens Alexander and Wiestler, Otmar D. and Wolf, Stephan and Unterberg, Andreas and Eils, Roland and Herold-Mende, Christel and Brors, Benedikt and Siebert, Reiner and Wiemann, Stefan and Heppner, Frank L. and Lichter, Peter and Radlwimmer, Bernhard}, title={The genomic and transcriptional landscape of primary central nervous system lymphoma}, year={2022}, pages={1-20}, language={eng}, issn={2041-1723}, volume={13}, number={Artikel-ID 2558}, note={Gesehen am 01.07.2022}, journal={Nature Communications}, doi={10.1038/s41467-022-30050-y}, } @article{UBHD-68618066, author={Rafiullah, Rafiullah and Aslamkhan, Muhammad and Paramasivam, Nagarajan and Thiel, Christian and Mustafa, Ghulam and Wiemann, Stefan and Schlesner, Matthias and Wade, Rebecca C. and Rappold, Gudrun and Berkel, Simone}, title={Homozygous missense mutation in the LMAN2L gene segregates with intellectual disability in a large consanguineous Pakistani family}, year={2016}, pages={138-144}, language={eng}, issn={1468-6244}, volume={53}, number={2}, note={Published Online First 13 November 2015 ; Gesehen am 17.07.2020}, journal={Journal of medical genetics}, doi={10.1136/jmedgenet-2015-103179}, } @article{UBHD-68721433, author={Rohde, Marius and Richter, Julia and Schlesner, Matthias and Betts, Matthew J. and Claviez, Alexander and Bonn, Bettina R. and Zimmermann, Martin and Damm-Welk, Christine and Russell, Robert B. and Borkhardt, Arndt and Eils, Roland and H{\"o}ll, Jessica and Szczepanowski, Monika and Oschlies, Ilske and Klapper, Wolfram and Burkhardt, Birgit and Siebert, Reiner}, title={Recurrent RHOA mutations in pediatric Burkitt lymphoma treated according to the NHL-BFM protocols}, year={2014}, pages={911-916}, language={eng}, issn={1098-2264}, volume={53}, number={11}, note={Gesehen am 08.04.2021}, journal={Genes, chromosomes & cancer}, doi={10.1002/gcc.22202}, } @article{UBHD-68676883, author={Roider, Tobias and Seufert, Julian and Uvarovskii, Alexey and Frauhammer, Felix and Bordas, Marie and Abedpour, Nima and Stolarczyk, Marta and Mallm, Jan-Philipp and Herbst, Sophie A. and Bruch, Peter-Martin and Balke-Want, Hyatt and Hundemer, Michael and Rippe, Karsten and Goeppert, Benjamin and Seiffert, Martina and Brors, Benedikt and Mechtersheimer, Gunhild and Zenz, Thorsten and Peifer, Martin and Chapuy, Bj{\"o}rn and Schlesner, Matthias and M{\"u}ller-Tidow, Carsten and Fr{\"o}hling, Stefan and Huber, Wolfgang and Anders, Simon and Dietrich, Sascha}, title={Dissecting intratumour heterogeneity of nodal B-cell lymphomas at the transcriptional, genetic and drug-response levels}, year={2020}, pages={896-906}, language={eng}, issn={1476-4679}, volume={22}, number={7}, note={Gesehen am 05.01.2021}, journal={Nature cell biology}, doi={10.1038/s41556-020-0532-x}, } @book{UBHD-68561947, author={Roider, Tobias and Seufert, Julian and Uvarovskii, Alexey and Frauhammer, Felix and Bordas, Marie and Abedpour, Nima and Stolarczyk, Marta and Mallm, Jan-Philipp and Herbst, Sophie A. and Bruch, Peter-Martin and Balke-Want, Hyatt and Hundemer, Michael and Rippe, Karsten and Goeppert, Benjamin and Seiffert, Martina and Brors, Benedikt and Mechtersheimer, Gunhild and Zenz, Thorsten and Peifer, Martin and Chapuy, Bj{\"o}rn and Schlesner, Matthias and M{\"u}ller-Tidow, Carsten and Fr{\"o}hling, Stefan and Huber, Wolfgang and Anders, Simon and Dietrich, Sascha}, title={Dissecting intratumor heterogeneity of nodal B cell lymphomas at transcriptional, genetic, and drug response levels}, publisher={Universit{\"a}t}, address={Heidelberg}, year={2020}, pages={1 Online-Ressource (15 Files)}, language={eng}, note={Gesehen am 06.04.2020}, doi={10.11588/data/VRJUNV}, url={https://doi.org/10.11588/data/VRJUNV}, library={UB}, } @article{UBHD-69117748, author={Scheller, Marina and Ludwig, Anne Kathrin and G{\"o}llner, Stefanie and Rohde, Christian and Kr{\"a}mer, Stephen and St{\"a}ble, Sina and Janssen, Maike and M{\"u}ller, James-Arne and He, Lixiazi and B{\"a}umer, Nicole and Arnold, Christian and Gerß, Joachim and Sch{\"o}nung, Maximilian and Thiede, Christian and Niederwieser, Christian and Niederwieser, Dietger and Serve, Hubert and Berdel, Wolfgang E. and Thiem, Ulrich and Hemmerling, Inga and Leuschner, Florian and Plass, Christoph and Schlesner, Matthias and Zaugg, Judith B. and Milsom, Michael and Trumpp, Andreas and Pabst, Caroline and Lipka, Daniel and M{\"u}ller-Tidow, Carsten}, title={Hotspot DNMT3A mutations in clonal hematopoiesis and acute myeloid leukemia sensitize cells to azacytidine via viral mimicry response}, year={2021}, pages={527-544}, language={eng}, issn={2662-1347}, volume={2}, number={5}, note={Gesehen am 31.08.2023}, journal={Nature cancer}, doi={10.1038/s43018-021-00213-9}, } @article{UBHD-68591278, author={Schlesner, Matthias and Eils, Roland}, title={Hypermutation takes the driver’s seat}, year={2015}, language={eng}, issn={1756-994X}, volume={7(2015) Artikel-Nummer 31}, number={3 Seiten}, note={Gesehen am 25.06.2020}, journal={Genome medicine}, doi={10.1186/s13073-015-0159-x}, } @book{UBHD-68423027, author={Schlesner, Matthias and Eils, J{\"u}rgen}, organization={Universit{\"a}tsbibliothek Heidelberg}, title={Projekttitel: Charakterisierung des nicht-Protein-kodierenden Subgenoms in Tumorzellen durch Mining genomweiter Omics-Datens{\"a}tze aus den deutschen ICGC Projekten}, subtitle={Schlussbericht : Teilprojekt 1: Arbeitspakete 4, 7 : Teilprojekt 2: Arbeitspaket 6 : Teilprojekt 3: Arbeitspakete 6, 7 =}, publisher={Universit{\"a}t Heidelberg}, address={[Heidelberg]}, year={2018}, pages={6 ungez{\"a}hlte Bl{\"a}tter}, language={ger}, note={F{\"o}rderkennzeichen BMBF 01KU1505E. - Verbund-Nummer 01166347. ; Autoren dem Berichtsblatt entnommen. - Paralleltitel dem englischen Berichtsblatt entnommen. ; Unterschiede zwischen dem gedruckten Dokument und der elektronischen Ressource k{\"o}nnen nicht ausgeschlossen werden.}, keywords={Sequenzdaten / Lymphom / B-Zell-Lymphom / Burkitt-Lymphom / Genom / Transkriptom / Molekulare Medizin}, } @book{UBHD-68423029, author={Schlesner, Matthias and Eils, J{\"u}rgen}, organization={Universit{\"a}tsbibliothek Heidelberg}, title={Projekttitel: Charakterisierung des nicht-Protein-kodierenden Subgenoms in Tumorzellen durch Mining genomweiter Omics-Datens{\"a}tze aus den deutschen ICGC Projekten}, subtitle={Schlussbericht : Teilprojekt 1: Arbeitspakete 4, 7 : Teilprojekt 2: Arbeitspaket 6 : Teilprojekt 3: Arbeitspakete 6, 7}, publisher={Universit{\"a}t Heidelberg}, address={[Heidelberg]}, year={2018}, pages={1 Online-Ressource (6 Seiten, 99,55 KB)}, language={ger}, note={F{\"o}rderkennzeichen BMBF 01KU1505E. - Verbund-Nummer 01166347 ; Autoren dem Berichtsblatt entnommen. - Paralleltitel dem englischen Berichtsblatt entnommen ; Unterschiede zwischen dem gedruckten Dokument und der elektronischen Ressource k{\"o}nnen nicht ausgeschlossen werden}, doi={10.2314/GBV:1662942257}, keywords={Sequenzdaten / Lymphom / B-Zell-Lymphom / Burkitt-Lymphom / Genom / Transkriptom / Molekulare Medizin}, } @article{UBHD-69117632, author={Sch{\"o}nung, Maximilian and Hartmann, Mark and Kr{\"a}mer, Stephen and St{\"a}ble, Sina and Hakobyan, Mariam and Kleinert, Emely and Aurich, Theo and Cobanoglu, Defne and Heidel, Florian and Fr{\"o}hling, Stefan and Milsom, Michael and Schlesner, Matthias and Lutsik, Pavlo and Lipka, Daniel}, title={Dynamic DNA methylation reveals novel cis-regulatory elements in mouse hematopoiesis}, year={2023}, pages={24-42.e7}, language={eng}, issn={1873-2399}, volume={117}, number={8 vom: Jan.}, journal={Experimental hematology}, doi={10.1016/j.exphem.2022.11.001}, } @article{UBHD-69293300, author={Seiboldt, Till and Zeiser, Constantia and Nguyen, Duy and Çeliky{\"u}rekli, Simay and Herter, Sonja and Najafi, Sara and Stroh-Dege, Alexandra and Meulenbroeks, Chris and Mack, Norman and Salem-Altintas, Rabia and Westermann, Frank and Schlesner, Matthias and Milde, Till and Kool, Marcel and Holland-Letz, Tim and Vogler, Meike and Peterziel, Heike and Witt, Olaf and Oehme, Ina}, title={Synergy of retinoic acid and BH3 mimetics in MYC(N)-driven embryonal nervous system tumours}, year={2024}, pages={763-777}, language={eng}, issn={1532-1827}, volume={131}, number={4}, note={Gesehen am 22.01.2025}, journal={British journal of cancer}, doi={10.1038/s41416-024-02740-5}, } @article{UBHD-68573967, author={Shostak, Anton and Ruppert, Bianca and Ha, Nati and Bruns, Philipp and Toprak, Umut and Eils, Roland and Schlesner, Matthias and Diernfellner, Axel and Brunner, Michael}, title={MYC/MIZ1-dependent gene repression inversely coordinates the circadian clock with cell cycle and proliferation}, year={2016}, pages={11 S.}, language={eng}, issn={2041-1723}, volume={7(2016) Artikel-Nummer 11807}, number={11 Seiten}, note={Gesehen am 24.06.2020}, journal={Nature Communications}, doi={10.1038/ncomms11807}, } @article{UBHD-68560523, author={Sieverling, Lina Katharine and Hong, Chen and Koser, Sandra D. and Ginsbach, Philip and Kleinheinz, Kortine and Hutter, Barbara and Braun, Delia and Cortés-Ciriano, Isidro and Xi, Ruibin and Kabbe, Rolf and Park, Peter J. and Eils, Roland and Schlesner, Matthias and Brors, Benedikt and Rippe, Karsten and Jones, David T. W. and Feuerbach, Lars}, title={Genomic footprints of activated telomere maintenance mechanisms in cancer}, year={2020}, pages={13 S.}, language={eng}, issn={2041-1723}, volume={11(2020) Artikel-Nummer 733}, number={13 Seiten}, note={Gesehen am 02.04.2020}, journal={Nature Communications}, doi={10.1038/s41467-019-13824-9}, } @article{UBHD-68563353, author={Sievers, Philipp and Chiang, Jason and Schrimpf, Daniel and Stichel, Damian and Paramasivam, Nagarajan and Sill, Martin and Gayden, Tenzin and Casalini, Belén and Reuss, David and Dalton, James and Pajtler, Kristian Wilfried and H{\"a}nggi, Daniel and Herold-Mende, Christel and Rushing, Elisabeth Jane and Korshunov, Andrey and Mawrin, Christian and Weller, Michael and Schlesner, Matthias and Wick, Wolfgang and Jabado, Nada and Jones, David T. W. and Pfister, Stefan and Deimling, Andreas von and Ellison, David W. and Sahm, Felix}, title={YAP1-fusions in pediatric NF2-wildtype meningioma}, year={2020}, pages={215-218}, language={eng}, issn={1432-0533}, volume={139}, number={1}, note={Published online: 16 November 2019 ; Gesehen am 09.04.2020}, journal={Acta neuropathologica}, doi={10.1007/s00401-019-02095-9}, } @article{UBHD-68422019, author={Simm, Franziska and Griesbeck, Anne and Choukair, Daniela and Weiß, Birgit and Paramasivam, Nagarajan and Klammt, J{\"u}rgen and Schlesner, Matthias and Wiemann, Stefan and Martinez, Cristina and Hoffmann, Georg F. and Pf{\"a}ffle, Roland Werner and Bettendorf, Markus and Rappold, Gudrun}, title={Identification of SLC20A1 and SLC15A4 among other genes as potential risk factors for combined pituitary hormone deficiency}, year={2018}, pages={728-736}, language={eng}, issn={1530-0366}, volume={20}, number={7}, note={Advance online publication: 26 October 2017 ; Gesehen am 19.08.2019}, journal={Genetics in medicine}, doi={10.1038/gim.2017.165}, } @article{UBHD-68793222, author={Singhal, Mahak and Gengenbacher, Nicolas and Abdul Pari, Ashik Ahmed and Kamiyama, Miki and Hai, Ling and Kuhn, Bianca and Kallenberg, David M. and Kulkarni, Shubhada and Camilli, Carlotta and Preuss, Stephanie and Leuchs, Barbara and Mogler, Carolin and Espinet, Elisa and Besemfelder, Eva and Heide, Danijela and Heikenwalder, Mathias and Sprick, Martin and Trumpp, Andreas and Krijgsveld, Jeroen and Schlesner, Matthias and Hu, Junhao and Moss, Stephen E. and Greenwood, John and Augustin, Hellmut}, title={Temporal multi-omics identifies LRG1 as a vascular niche instructor of metastasis}, year={2021}, pages={1-14}, language={eng}, issn={1946-6242}, volume={13}, note={Gesehen am 25.10.2021}, journal={Science translational medicine}, doi={10.1126/scitranslmed.abe6805}, } @article{UBHD-68741067, author={Skopelitou, Diamanto and Miao, Beiping and Srivastava, Aayushi and Kumar, Abhishek and Kuświk, Magdalena and Dymerska, Dagmara and Paramasivam, Nagarajan and Schlesner, Matthias and Lubiński, Jan and Hemminki, Kari and F{\"o}rsti, Asta and Bandapalli, Obul Reddy}, title={A novel low-risk germline variant in the SH2 domain of the SRC gene affects multiple pathways in familial colorectal cancer}, year={2021}, pages={1-15}, language={eng}, issn={2075-4426}, volume={11}, note={Gesehen am 26.05.2021}, journal={Journal of Personalized Medicine}, doi={10.3390/jpm11040262}, } @article{UBHD-68721795, author={Skopelitou, Diamanto and Miao, Beiping and Srivastava, Aayushi and Kumar, Abhishek and Kuswick, Magdalena and Dymerska, Dagmara and Paramasivam, Nagarajan and Schlesner, Matthias and Lubinski, Jan and Hemminki, Kari and F{\"o}rsti, Asta and Bandapalli, Obul Reddy}, title={Whole exome sequencing identifies APCDD1 and HDAC5 genes as potentially cancer predisposing in familial colorectal cancer}, year={2021}, pages={1-21}, language={eng}, issn={1422-0067 and 1661-6596}, volume={22}, note={Gesehen am 27.08.2021}, journal={International journal of molecular sciences}, doi={10.3390/ijms22041837}, } @article{UBHD-68794142, author={Slater, Emily P. and Wilke, Lisa M. and B{\"o}hm, Lutz Benedikt and Strauch, Konstantin and Lutz, Manuel and Gercke, Norman and Matth{\"a}i, Elvira and Hemminki, Kari and F{\"o}rsti, Asta and Schlesner, Matthias and Paramasivam, Nagarajan and Bartsch, Detlef K.}, title={Combinations of low-frequency genetic variants might predispose to familial pancreatic cancer}, year={2021}, pages={1-14}, language={eng}, issn={2075-4426}, volume={11}, note={Gesehen am 27.10.2021}, journal={Journal of Personalized Medicine}, doi={10.3390/jpm11070631}, } @article{UBHD-68496134, author={Stenzinger, Albrecht and Endris, Volker and Budczies, Jan and Merkelbach-Bruse, Sabine and Kazdal, Daniel and Dietmaier, Wolfgang and Pfarr, Nicole and Siebolts, Udo and Hummel, Michael and Herold, Sylvia and Andreas, Johanna and Zoche, Martin and T{\"o}gel, Lars and Rempel, Eugen and Maas, J{\"o}rg and Merino, Diana and Stewart, Mark and Plath, Karim and Schlesner, Matthias and Glimm, Hanno and Fr{\"o}hling, Stefan and Allen, Jeff and Horst, David and Baretton, Gustavo and Wickenhauser, Claudia and Tiemann, Markus and Evert, Matthias and Moch, Holger and Kirchner, Thomas and B{\"u}ttner, Reinhard and Schirmacher, Peter and Jung, Andreas and Haller, Florian and Weichert, Wilko and Dietel, Manfred}, title={Harmonization and standardization of panel-based tumor mutational burden (TMB) measurement}, subtitle={real-world results and recommendations of the QuIP study}, year={2020}, pages={1177-1189}, language={eng}, issn={1556-1380}, volume={15}, number={7}, note={Gesehen am 04.03.2020}, journal={Journal of thoracic oncology}, doi={10.1016/j.jtho.2020.01.023}, } @article{UBHD-68443888, author={Sturm, Dominik and Orr, Brent A. and Toprak, Umut and Hovestadt, Volker and Jones, David T. W. and Capper, David and Sill, Martin and Buchhalter, Ivo and Northcott, Paul A. and Leis, Irina and Ryzhova, Marina and K{\"o}lsche, Christian and Pfaff, Elke and Allen, Sariah J. and Balasubramanian, Gnana Prakash and Jones, Barbara Christine and Pajtler, Kristian Wilfried and Brabetz, Sebastian and Johann, Pascal-David and Sahm, Felix and Reimand, J{\"u}ri and Mackay, Alan and Carvalho, Diana M. and Remke, Marc and Phillips, Joanna J. and Perry, Arie and Cowdrey, Cynthia and Drissi, Rachid and Fouladi, Maryam and Giangaspero, Felice and Łastowska, Maria and Grajkowska, Wiesława and Scheurlen, Wolfram and Pietsch, Torsten and Hagel, Christian and Gojo, Johannes and L{\"o}tsch, Daniela and Berger, Walter and Slavc, Irene and Haberler, Christine and Jouvet, Anne and Holm, Stefan and Hofer, Silvia and Prinz, Marco and Keohane, Catherine and Fried, Iris and Mawrin, Christian and Scheie, David and Mobley, Bret C. and Schniederjan, Matthew J. and Santi, Mariarita and Buccoliero, Anna M. and Dahiya, Sonika and Kramm, Christof M. and Bueren, André von and Hoff, Katja von and Rutkowski, Stefan and Herold-Mende, Christel and Fr{\"u}hwald, Michael and Milde, Till and Hasselblatt, Martin and Wesseling, Pieter and R{\"o}ßler, Jochen and Sch{\"u}ller, Ulrich and Ebinger, Martin and Schittenhelm, Jens Florian and Frank, Stephan and Grobholz, Rainer and Vajtai, Istvan and Schneppenheim, Reinhard and Zitterbart, Karel and Collins, V. Peter and Aronica, Eleonora and Varlet, Pascale and Puget, Stephanie and Dufour, Christelle and Grill, Jacques and Figarella-Branger, Dominique and Wolter, Marietta and Schuhmann, Martin Ulrich and Shalaby, Tarek and Grotzer, Michael and Meter, Timothy van and Felsberg, J{\"o}rg and Reifenberger, Guido and Snuderl, Matija and Forrester, Lynn Ann and Koster, Jan and Versteeg, Rogier and Volckmann, Richard and Sluis, Peter van and Wolf, Stephan and Mikkelsen, Tom and Gajjar, Amar and Aldape, Kenneth and Moore, Andrew S. and Taylor, Michael D. and Jones, Chris and Jabado, Nada and Karajannis, Matthias A. and Eils, Roland and Schlesner, Matthias and Lichter, Peter and Deimling, Andreas von and Pfister, Stefan and Ellison, David W. and Korshunov, Andrey and Kool, Marcel}, title={New brain tumor entities emerge from molecular classification of CNS-PNETs}, year={2016}, pages={1060-1072}, language={eng}, issn={1097-4172}, volume={164}, number={5}, note={Gesehen am 23.10.2019}, journal={Cell}, doi={10.1016/j.cell.2016.01.015}, } @book{UBHD-68495511, organization={Deutsches Krebsforschungszentrum}, title={SYS-GLIO: Systembasierte Vorhersagen f{\"u}r das biologische und klinische Verhalten von Gliomen}, subtitle={Abschlussbericht : Laufzeit des Vorhabens: 01.03.2015-28.02.2018 (verl{\"a}ngert bis 31.12.2018) : Berichtszeitraum: 01.03.2015-31.12.2018}, publisher={DKFZ}, address={Heidelberg}, year={2018}, pages={8 Bl{\"a}tter}, language={ger}, note={F{\"o}rderkennzeichen BMBF 031A425A ; Verbundnummer 01154459 ; Unterschiede zwischen dem gedruckten Dokument und der elektronischen Ressource k{\"o}nnen nicht ausgeschlossen werden}, keywords={Gliom / Therapieresistenz / Systemmedizin / Neuropathologie}, } @book{UBHD-68495515, organization={Deutsches Krebsforschungszentrum}, title={SYS-GLIO: Systembasierte Vorhersagen f{\"u}r das biologische und klinische Verhalten von Gliomen}, subtitle={Abschlussbericht : Laufzeit des Vorhabens: 01.03.2015-28.02.2018 (verl{\"a}ngert bis 31.12.2018) : Berichtszeitraum: 01.03.2015-31.12.2018}, publisher={DKFZ}, address={Heidelberg}, year={2019}, pages={1 Online-Ressource (8 Seiten, 95,42 KB)}, language={ger}, note={F{\"o}rderkennzeichen BMBF 031A425A ; Verbundnummer 01154459 ; Unterschiede zwischen dem gedruckten Dokument und der elektronischen Ressource k{\"o}nnen nicht ausgeschlossen werden}, doi={10.2314/KXP:1689649704}, keywords={Gliom / Therapieresistenz / Systemmedizin / Neuropathologie}, } @article{UBHD-68581361, author={Trump, Saskia and Bieg, Matthias and Gu, Zuguang and Th{\"u}rmann, Loreen and Bauer, Tobias and Bauer, Mario and Ishaque, Naveed and R{\"o}der, Stefan and Gu, Lei and Herberth, Gunda and Lawerenz, Christian and Borte, Michael and Schlesner, Matthias and Plass, Christoph and Diessl, Nicolle and Eszlinger, Markus and M{\"u}cke, Oliver and Elvers, Horst-Dietrich and Wissenbach, Dirk K. and von Bergen, Martin and Herrmann, Carl and Weichenhan, Dieter and Wright, Rosalind J. and Lehmann, Irina and Eils, Roland}, title={Prenatal maternal stress and wheeze in children}, subtitle={novel insights into epigenetic regulation}, year={2016}, pages={14 S.}, language={eng}, issn={2045-2322}, volume={6(2016) Artikel-Nummer 28616}, number={14 Seiten}, note={Gesehen am 27.05.2020}, journal={Scientific reports}, doi={10.1038/srep28616}, } @article{UBHD-69125059, author={Turco, Verena and Pfleiderer, Kira and Hunger, Jessica and Horvat, Natalie and Karimian-Jazi, Kianush and Schregel, Katharina and Fischer, Manuel and Brugnara, Gianluca and J{\"a}hne, Kristine and Sturm, Volker J{\"o}rg Friedrich and Streibel, Yannik and Nguyen, Duy and Altamura, Sandro and Agardy, Dennis and Soni, Shreya S. and Alsasa, Abdulrahman and Bunse, Theresa and Schlesner, Matthias and Muckenthaler, Martina and Weissleder, Ralph and Wick, Wolfgang and Heiland, Sabine and Vollmuth, Philipp and Bendszus, Martin and Rodell, Christopher B. and Breckwoldt, Michael O. and Platten, Michael}, title={T cell-independent eradication of experimental glioma by intravenous TLR7/8-agonist-loaded nanoparticles}, year={2023}, pages={1-15}, language={eng}, issn={2041-1723}, volume={14}, number={Artikel-ID 771}, note={Gesehen am 28.09.2023}, journal={Nature Communications}, doi={10.1038/s41467-023-36321-6}, } @article{UBHD-68265311, author={Ullah, Anwar and Paramasivam, Nagarajan and Schlesner, Matthias}, title={A report of whole-genome sequencing in neurologic Wilson's disease}, year={2017}, pages={629-631}, language={eng}, issn={1998-4022}, volume={65}, number={3}, note={Date of web publication 9-May-2017 ; Gesehen am 26.06.2018}, journal={Neurology India}, doi={10.4103/neuroindia.NI_1274_16}, } @article{UBHD-68571776, author={Wagener, Rabea and Toprak, Umut and Seufert, Julian and Schlesner, Matthias}, title={Cryptic insertion of MYC exons 2 and 3 into the immunoglobulin heavy chain locus detected by whole genome sequencing in a case of “MYC-negative” Burkitt lymphoma}, year={2020}, pages={e202-e205}, language={eng}, issn={1592-8721}, volume={105}, number={4}, note={Gesehen am 29.04.2020}, journal={Haematologica}, doi={10.3324/haematol.2018.208140}, } @article{UBHD-68401989, author={Warsow, Gregor and H{\"u}bschmann, Daniel and Kleinheinz, Kortine and Nientiedt, Cathleen and Heller, Martina and Van Coile, Laura and Tolstov, Yanis and Trennheuser, Lukas and Wieczorek, Kathrin and Pecqueux, Carine and Gasch, Claudia and Kuru, Timur Hasan and Nyarangi-Dix, Joanne and Hatiboglu, Gencay and Teber, Dogu and Stenzinger, Albrecht and Roth, Wilfried and Hadaschik, Boris and Pahernik, Sascha and J{\"a}ger, Dirk and Gr{\"u}llich, Carsten and Duensing, Anette and Eils, Roland and Schlesner, Matthias and S{\"u}ltmann, Holger and Hohenfellner, Markus and Duensing, Stefan}, title={Genomic features of renal cell carcinoma with venous tumor thrombus}, year={2018}, pages={12 S.}, language={eng}, issn={2045-2322}, volume={8(2018) Artikel-Nummer 7477}, number={12 Seiten}, note={Gesehen am 26.06.2019}, journal={Scientific reports}, doi={10.1038/s41598-018-25544-z}, } @article{UBHD-68661299, author={Whalley, Justin P. and Buchhalter, Ivo and Rheinbay, Esther and Raine, Keiran M. and Stobbe, Miranda D. and Kleinheinz, Kortine and Werner, Johannes and Beltran, Sergi and Gut, Marta and H{\"u}bschmann, Daniel and Hutter, Barbara and Livitz, Dimitri and Perry, Marc D. and Rosenberg, Mara and Saksena, Gordon and Trotta, Jean-Rémi and Eils, Roland and Gerhard, Daniela S. and Campbell, Peter J. and Schlesner, Matthias and Gut, Ivo G.}, title={Framework for quality assessment of whole genome cancer sequences}, year={2020}, language={eng}, issn={2041-1723}, volume={11(2020) Artikel-Nummer 5040}, number={8 Seiten}, note={Gesehen am 16.11.2020}, journal={Nature Communications}, doi={10.1038/s41467-020-18688-y}, } @article{UBHD-68893317, author={Xie, Ruifan and Keßler, Tobias and Grosch, Julia Katharina and Hai, Ling and Venkataramani, Varun and Huang, Lulu and Hoffmann, Dirk C. and Solecki, Gergely and Ratliff, Miriam and Schlesner, Matthias and Wick, Wolfgang and Winkler, Frank}, title={Tumor cell network integration in glioma represents a stemness feature}, year={2021}, pages={757-769}, language={eng}, issn={1523-5866}, volume={23}, number={5}, note={Gesehen am 09.03.2022 ; Published: 15 December 2020}, journal={Neuro-Oncology}, doi={10.1093/neuonc/noaa275}, } @article{UBHD-68666686, author={Zheng, Guoqiao and Catalano, Calogerina and Bandapalli, Obul Reddy and Paramasivam, Nagarajan and Chattopadhyay, Subhayan and Schlesner, Matthias and Sijmons, Rolf and Hemminki, Akseli and Dymerska, Dagmara and Lubinski, Jan and Hemminki, Kari and F{\"o}rsti, Asta}, title={Cancer predisposition genes in cancer-free families}, year={2020}, pages={13 S.}, language={eng}, issn={2072-6694}, volume={12(2020}, note={Gesehen am 30.11.2020}, journal={Cancers}, doi={10.3390/cancers12102770}, } @article{UBHD-68897048, author={Zhu, Lizhen and Miao, Beiping and Dymerska, Dagmara and Kuswik, Magdalena and Bueno-Martínez, Elena and Sanoguera-Miralles, Lara and Velasco, Eladio A. and Paramasivam, Nagarajan and Schlesner, Matthias and Kumar, Abhishek and Yuan, Ying and Lubinski, Jan and Bandapalli, Obul Reddy and Hemminki, Kari and F{\"o}rsti, Asta}, title={Germline variants of CYBA and TRPM4 predispose to familial colorectal cancer}, year={2022}, pages={1-15}, language={eng}, issn={2072-6694}, volume={14}, note={Gesehen am 22.03.2022}, journal={Cancers}, doi={10.3390/cancers14030670}, }