| Titel: | Plant gene regulatory networks |
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| Titelzusatz: | methods and protocols |
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| Mitwirkende: | Kaufmann, Kerstin [HerausgeberIn]  |
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| | Müller-Röber, Bernd [HerausgeberIn] |
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| Verf.angabe: | edited by Kerstin Kaufmann, Bernd Mueller-Roeber |
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| Verlagsort: | New York, NY |
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| Verlag: | Humana Press |
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| E-Jahr: | 2017 |
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| Jahr: | [2017] |
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| Umfang: | xi, 350 Seiten |
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| Illustrationen: | Illustrationen, Diagramme |
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| Format: | 25.4 cm x 17.8 cm |
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| Gesamttitel/Reihe: | Methods in molecular biology ; 1629 |
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| | Springer Protocols |
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| Fussnoten: | Includes bibliographical references and index |
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| Ang. zum Inhalt: | From genes to networks : characterizing gene-regulatory interactions in plants / Kerstin Kaufmann and Dijun Chen |
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| | From genes to networks : characterizing gene-regulatory interactions in plants / Kerstin Kaufmann and Dijun Chen |
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| | Inducible promoter systems for gene perturbation experiments in Arabidopsis / Bennett Thomson, Emmanuelle Graciet, and Frank Wellmer |
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| | Cell type-specific gene expression profiling using fluorescence-activated nuclear sorting / Daniel Slane and Martin Bayer |
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| | Characterization of cell-type-specific DNA binding sites of plant transcription factors using chromatin immunoprecipitation / On Sun Lau |
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| | Yeast one- and two-hybrid high-throughput screenings using arrayed libraries / Rocío Sánchez-Montesino and Luis Oñate-Sánchez |
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| | SELEX-seq : a method to determine DNA binding specificities of plant transcription factors / Cezary Smaczniak, Gerco C. Angenent, and Kerstin Kaufmann |
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| | Analysis of a plant transcriptional regulatory network using transient expression Systems / Sara Díaz-Triviño, Yuchen Long, Ben Scheres, and Ikram Blilou |
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| | Analysis of in vivo chromatin and protein interactions of Arabidopsis transcript elongation factors / Alexander Pfab, Wojciech Antosz, Philipp Holzinger, Astrid Bruckmann, Joachim Griesenbeck, and Klaus D. Grasser |
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| | Characterization of mediator complex and its associated proteins from rice / Subhasis Samanta and Jitendra Kumar Thakur |
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| | DNase I SIM : a simplified in-nucleus method for DNase I hypersensitive site sequencing / Sergei A. Filichkin and Molly Megraw |
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| | In situ Hi-C library preparation for plants to study their three-dimensional chromatin interactions on a genome-wide scale / Chang Liu |
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| | Multiplexed transcriptional activation or repression in plants using CRISPR-dCas9-based systems / Levi G. Lowder, Joseph W. Paul III, and Yiping Qi |
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| | Generation of dTALEs and libraries of synthetic TALE-activated promoters for engineering of gene regulatory networks in plants / Tom Schreiber and Alain Tissier |
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| | Design of knowledge bases for plant gene regulatory networks / Eric Mukundi, Fabio Gomez-Cano, Wilberforce Zachary Ouma, and Erich Grotewold |
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| | AraNet : a network biology server for Arabidopsis thaliana and other non-model plant species / Tak Lee and Insuk Lee |
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| | Integration of genome-wide TF binding and gene expression data to characterize gene regulatory networks in plant development / Dijun Chen and Kerstin Kaufmann |
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| | Predicting transcription factor binding sites and their cognate transcription factors using gene expression data / Chun-Ping Yu and Wen-Hsiung Li |
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| | Computational approaches to study gene regulatory networks / Nooshin Omranian and Zoran Nikoloski |
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| | Boolean dynamic modeling approaches to study plant gene regulatory networks : integration, validation, and prediction / José Dávila Velderraín, Juan Carlos Martínez-García, and Elena R. Álvarez-Buylla |
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| | ODE-based modeling of complex regulatory circuits / Daniel D. Seaton |
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| | Inferring gene regulatory networks in the Arabidopsis root using a dynamic Bayesian network approach / Maria Angels de Luis Balaguer and Rosangela Sozzani. |
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| | Inducible promoter systems for gene perturbation experiments in Arabidopsis / Bennett Thomson, Emmanuelle Graciet, and Frank Wellmer |
|---|
| | Cell type-specific gene expression profiling using fluorescence-activated nuclear sorting / Daniel Slane and Martin Bayer |
|---|
| | Characterization of cell-type-specific DNA binding sites of plant transcription factors using chromatin immunoprecipitation / On Sun Lau |
|---|
| | Yeast one- and two-hybrid high-throughput screenings using arrayed libraries / Rocío Sánchez-Montesino and Luis Oñate-Sánchez |
|---|
| | SELEX-seq : a method to determine DNA binding specificities of plant transcription factors / Cezary Smaczniak, Gerco C. Angenent, and Kerstin Kaufmann |
|---|
| | Analysis of a plant transcriptional regulatory network using transient expression Systems / Sara Díaz-Triviño, Yuchen Long, Ben Scheres, and Ikram Blilou |
|---|
| | Analysis of in vivo chromatin and protein interactions of Arabidopsis transcript elongation factors / Alexander Pfab, Wojciech Antosz, Philipp Holzinger, Astrid Bruckmann, Joachim Griesenbeck, and Klaus D. Grasser |
|---|
| | Characterization of mediator complex and its associated proteins from rice / Subhasis Samanta and Jitendra Kumar Thakur |
|---|
| | DNase I SIM : a simplified in-nucleus method for DNase I hypersensitive site sequencing / Sergei A. Filichkin and Molly Megraw |
|---|
| | In situ Hi-C library preparation for plants to study their three-dimensional chromatin interactions on a genome-wide scale / Chang Liu |
|---|
| | Multiplexed transcriptional activation or repression in plants using CRISPR-dCas9-based systems / Levi G. Lowder, Joseph W. Paul III, and Yiping Qi |
|---|
| | Generation of dTALEs and libraries of synthetic TALE-activated promoters for engineering of gene regulatory networks in plants / Tom Schreiber and Alain Tissier |
|---|
| | Design of knowledge bases for plant gene regulatory networks / Eric Mukundi, Fabio Gomez-Cano, Wilberforce Zachary Ouma, and Erich Grotewold |
|---|
| | AraNet : a network biology server for Arabidopsis thaliana and other non-model plant species / Tak Lee and Insuk Lee |
|---|
| | Integration of genome-wide TF binding and gene expression data to characterize gene regulatory networks in plant development / Dijun Chen and Kerstin Kaufmann |
|---|
| | Predicting transcription factor binding sites and their cognate transcription factors using gene expression data / Chun-Ping Yu and Wen-Hsiung Li |
|---|
| | Computational approaches to study gene regulatory networks / Nooshin Omranian and Zoran Nikoloski |
|---|
| | Boolean dynamic modeling approaches to study plant gene regulatory networks : integration, validation, and prediction / José Dávila Velderraín, Juan Carlos Martínez-García, and Elena R. Álvarez-Buylla |
|---|
| | ODE-based modeling of complex regulatory circuits / Daniel D. Seaton |
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| | Inferring gene regulatory networks in the Arabidopsis root using a dynamic Bayesian network approach / Maria Angels de Luis Balaguer and Rosangela Sozzani. |
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| ISBN: | 1-4939-7124-7 |
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| | 978-1-4939-7124-4 |
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| Bestellnr.: | 978-1-4939-7124-4 |
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| | 86534488 |
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| URL: | Inhaltstext: http://deposit.d-nb.de/cgi-bin/dokserv?id=dfa8b8941e3e4fa382dc6f915172bda6&prov=M&dok_var=1&dok_ext=htm |
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| Schlagwörter: | (s)Pflanzen / (s)Genregulation / (s)Molekularbiologische Methode |
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| Sprache: | eng |
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| Bibliogr. Hinweis: | Erscheint auch als : Online-Ausgabe |
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| | Erscheint auch als : Online-Ausgabe: Plant Gene Regulatory Networks. - New York, NY : Humana Press, 2017. - Online-Ressource (XI, 350 p. 57 illus., 51 illus. in color, online resource) |
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| RVK-Notation: | WN 5400 |
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| | WG 1940 |
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| K10plus-PPN: | 893546321 |
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| Verknüpfungen: | → Übergeordnete Aufnahme |
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