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Verfasst von:Gao, Qi [VerfasserIn]   i
 Rohr, Karl [VerfasserIn]   i
Titel:A global method for non-rigid registration of cell nuclei in live cell time-lapse images
Verf.angabe:Qi Gao, Karl Rohr
E-Jahr:2019
Jahr:27 February 2019
Umfang:12 S.
Fussnoten:Gesehen am 09.12.2019
Titel Quelle:Enthalten in: Institute of Electrical and Electronics EngineersIEEE transactions on medical imaging
Ort Quelle:New York, NY : Institute of Electrical and Electronics Engineers,, 1982
Jahr Quelle:2019
Band/Heft Quelle:38(2019), 10, Seite 2259-2270
ISSN Quelle:1558-254X
Abstract:Non-rigid registration of cell nuclei in time-lapse microscopy images can be achieved through estimating the deformation fields using optical flow methods. In contrast to local optical flow models employed in the existing non-rigid registration methods, we introduce approaches based on a global optical flow model. Our registration model consists of a data fidelity term and a regularization term. We compared different regularizers for the deformation fields and found that a convex quadratic function is more suitable than non-convex ones. To improve the robustness, we propose an adaptive weighting scheme based on the statistics of the noise in fluorescence microscopy images as well as a combined local-global scheme. Moreover, we extend the global method by exploiting high-order image features. The best suitable high-order features are determined through learning two generative image models, namely, fields of experts and convolutional Gaussian restricted Boltzmann machine, whose model formulations are both consistent with the assumption of high-order feature constancy in the registration model. Using multiple data sets of real 2D and 3D live cell microscopy image sequences as well as synthetic image data, we demonstrate that our proposed approach outperforms the previous methods in terms of both registration accuracy and computational efficiency.
DOI:doi:10.1109/TMI.2019.2901918
URL:Bitte beachten Sie: Dies ist ein Bibliographieeintrag. Ein Volltextzugriff für Mitglieder der Universität besteht hier nur, falls für die entsprechende Zeitschrift/den entsprechenden Sammelband ein Abonnement besteht oder es sich um einen OpenAccess-Titel handelt.

Volltext: https://dx.doi.org/10.1109/TMI.2019.2901918
 DOI: https://doi.org/10.1109/TMI.2019.2901918
Datenträger:Online-Ressource
Sprache:eng
Sach-SW:Biomedical optical imaging
 Computational modeling
 fluorescence microscopy images
 Markov random field
 Microscopy
 Non-rigid registration
 optical flow
 Optical imaging
 Optical microscopy
 Optical scattering
 regularization
 restricted Boltzmann machine
 Strain
K10plus-PPN:1684866405
Verknüpfungen:→ Zeitschrift

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