heiBIB: Lipka, Daniel

Lipka, Daniel Dr. med.Universität HeidelbergHeidelberg

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englisch (48)
deutsch (1)

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Publikationen in heiBIB

Weichenhan, Dieter: Altered enhancer-promoter interaction leads to MNX1 expression in pediatric acute myeloid leukemia with t(7;12)(q36;p13) / Dieter Weichenhan, Anna Riedel, Etienne Sollier, Umut H. Toprak, Joschka Hey, Kersten Breuer, Justyn… , October 8, 2024. - 12 S. : Illustrationen
In: Blood advances, ISSN 2473-9537. 8(2024), 19, Seite 5100-5111
DOI: 10.1182/bloodadvances.2023012161
Haage, Tobias Ronny: Neutrophil-specific expression of JAK2-V617F or CALRmut induces distinct inflammatory profiles in myeloproliferative neoplasia / Tobias Ronny Haage, Emmanouil Charakopoulos, Vikas Bhuria, Conny K. Baldauf, Mark Korthals, Juliane … , 09 June 2024. - 23 S. : Illustrationen
In: Journal of hematology & oncology, ISSN 1756-8722. 17(2024), Artikel-ID 43, Seite 1-23
DOI: 10.1186/s13045-024-01562-5
Ellermann, Julia: Multi-omic and functional analysis for classification and treatment of sarcomas with FUS-TFCP2 or EWSR1-TFCP2 fusions / Julia Schöpf, Sebastian Uhrig, Christoph E. Heilig, Kwang-Seok Lee, Tatjana Walther, Alexander Caraz… , 02 January 2024. - 17 S.
In: Nature Communications, ISSN 2041-1723. 15(2024), Artikel-ID 51, Seite 1-17
DOI: 10.1038/s41467-023-44360-2
Schönung, Maximilian: Dynamic DNA methylation reveals novel cis-regulatory elements in mouse hematopoiesis / Maximilian Schönung, Mark Hartmann, Stephen Krämer, Sina Stäble, Mariam Hakobyan, Emely Kleinert, Th… , January 2023. - 26 S.
In: Experimental hematology, ISSN 1873-2399. 117(2023), 8 vom: Jan., Seite 24-42.e7
DOI: 10.1016/j.exphem.2022.11.001
Zioni, Naama: Inflammatory signals from fatty bone marrow support DNMT3A driven clonal hematopoiesis / N. Zioni, A. Akhiad Bercovich, N. Chapal-Ilani, Tal Bacharach, N. Rappoport, A. Solomon, R. Avraham,… , 12 April 2023. - 17 S.
In: Nature Communications, ISSN 2041-1723. 14(2023), Artikel-ID 2070, Seite 1-17
DOI: 10.1038/s41467-023-36906-1
Maron, Roman C.: Model soups improve performance of dermoscopic skin cancer classifiers / Roman C. Maron, Achim Hekler, Sarah Haggenmüller, Christof von Kalle, Jochen S. Utikal, Verena Mülle… , September 2022. - 10 S.
In: European journal of cancer, ISSN 1879-0852. 173(2022), Seite 307-316
DOI: 10.1016/j.ejca.2022.07.002
Dietlein, Nikolaus: Usp22 is an intracellular regulator of systemic emergency hematopoiesis / Nikolaus Dietlein, Xi Wang, Jonas Metz, Olivier Disson, Fuwei Shang, Celine Beyersdörffer, Esther Ro… , 9 Dec 2022. - 17 S.
In: Science immunology, ISSN 2470-9468. 7(2022), 78 vom: Dez., Artikel-ID eabq2061, Seite 1-17
DOI: 10.1126/sciimmunol.abq2061
Harrison, Claire N.: A phase Ib dose-finding study of panobinostat and ruxolitinib in myelofibrosis / Claire Harrison, Florian H. Heidel, Alessandro M. Vannucchi, Jean-Jacques Kiladjian, Amjad Hayat, Fr… , August 2022. - 4 S.
In: HemaSphere, ISSN 2572-9241. 6(2022), 8, Artikel-ID e757, Seite 1-4
DOI: 10.1097/HS9.0000000000000757
Jahn, Arne: Comprehensive cancer predisposition testing within the prospective MASTER trial identifies hereditary cancer patients and supports treatment decisions for rare cancers / A. Jahn, A. Rump, T.J. Widmann, C. Heining, P. Horak, B. Hutter, N. Paramasivam, S. Uhrig, L. Gieldo… , 18 August 2022. - 14 S.
In: Annals of oncology, ISSN 1569-8041. 33(2022), 11, Seite 1186-1199
DOI: 10.1016/j.annonc.2022.07.008
Heilig, Christoph E.: Gene expression-based prediction of pazopanib efficacy in sarcoma / Christoph E. Heilig, Andreas Laßmann, Sadaf S. Mughal, Andreas Mock, Sebastian Pirmann, Veronica Tel… , 25 June 2022. - 12 S.
In: European journal of cancer, ISSN 1879-0852. 172(2022), Seite 107-118
DOI: 10.1016/j.ejca.2022.05.025
Meier, Ruth: The antileukemic activity of decitabine upon PML/RARA-negative AML blasts is supported by all-trans retinoic acid : in vitro and in vivo evidence for cooperation / Ruth Meier, Gabriele Greve, Dennis Zimmer, Helena Bresser, Bettina Berberich, Ralitsa Langova, Julia… , 22 August 2022. - 13 S.
In: Blood cancer journal, ISSN 2044-5385. 12(2022), 8, Artikel-ID 122, Seite 1-13
DOI: 10.1038/s41408-022-00715-4
Weichenhan, Dieter: Epigenomic technologies for precision oncology / Dieter Weichenhan, Daniel B. Lipka, Pavlo Lutsik, Ashish Goyal, Christoph Plass, September 2022. - 9 S.
In: Seminars in cancer biology, ISSN 1096-3650. 84(2022), Seite 60-68
DOI: 10.1016/j.semcancer.2020.08.004
Bogeska, Ruzhica: Inflammatory exposure drives long-lived impairment of hematopoietic stem cell self-renewal activity and accelerated aging / Ruzhica Bogeska, Ana-Matea Mikecin, Paul Kaschutnig, Malak Fawaz, Marleen Büchler-Schäff, Duy Le, Mi… , 4 August 2022. - 12 S.
In: Cell stem cell, ISSN 1875-9777. 29(2022), 8, Seite 1273-1284.e8
DOI: 10.1016/j.stem.2022.06.012
Möhrmann, Lino: Comprehensive genomic and epigenomic analysis in cancer of unknown primary guides molecularly-informed therapies despite heterogeneity / Lino Möhrmann, Maximilian Werner, Małgorzata Oleś, Andreas Mock, Sebastian Uhrig, Arne Jahn, Simon K… , 02 August 2022. - 15 S.
In: Nature Communications, ISSN 2041-1723. 13(2022), Artikel-ID 4485, Seite 1-15
DOI: 10.1038/s41467-022-31866-4
Hauser, Katja: Explainable artificial intelligence in skin cancer recognition : a systematic review / Katja Hauser, Alexander Kurz, Sarah Haggenmüller, Roman C. Maron, Christof von Kalle, Jochen S. Utik… , May 2022. - 16 S.
In: European journal of cancer, ISSN 1879-0852. 167(2022), Seite 54-69
DOI: 10.1016/j.ejca.2022.02.025
Czéh, Melinda: DNMT1 deficiency impacts on plasmacytoid dendritic cells in homeostasis and autoimmune disease / Melinda Czeh, Sina Stäble, Stephen Krämer, Lena Tepe, Sweta Talyan, Joana Carrelha, Yiran Meng, Barb… , January 11, 2022. - 13 S.
In: The journal of immunology, ISSN 1550-6606. 208(2022), 2 vom: Jan., Seite 358-370
DOI: 10.4049/jimmunol.2100624
Schönung, Maximilian: AmpliconDesign : an interactive web server for the design of high-throughput targeted DNA methylation assays / Maximilian Schönung, Jana Hess, Pascal Bawidamann, Sina Stäble, Joschka Hey, Jens Langstein, Yassen … , 2021. - 7 S. : Illustrationen
In: Epigenetics, ISSN 1559-2308. 16(2021), 9, Seite 933-939
DOI: 10.1080/15592294.2020.1834921
Grigoryan, Ani: Attrition of X chromosome inactivation in aged hematopoietic stem cells / Ani Grigoryan, Johannes Pospiech, Stephen Krämer, Daniel Lipka, Thomas Liehr, Hartmut Geiger, Hirosh… , 13 April 2021. - 9 S.
In: Stem cell reports, ISSN 2213-6711. 16(2021), 4 vom: Apr., Seite 708-716
DOI: 10.1016/j.stemcr.2021.03.007
Scheller, Marina: Hotspot DNMT3A mutations in clonal hematopoiesis and acute myeloid leukemia sensitize cells to azacytidine via viral mimicry response / Marina Scheller, Anne Kathrin Ludwig, Stefanie Göllner, Christian Rohde, Stephen Krämer, Sina Stäble… , 25 May 2021. - 18 S.
In: Nature cancer, ISSN 2662-1347. 2(2021), 5, Seite 527-544
DOI: 10.1038/s43018-021-00213-9
Zanetti, Costanza: The age of the bone marrow microenvironment influences B-cell acute lymphoblastic leukemia progression via CXCR5-CXCL13 / Costanza Zanetti, Rahul Kumar, Joscha Ender, Parimala S. Godavarthy, Mark Hartmann, Joschka Hey, Ker… , 2021. - 15 S.
In: Blood, ISSN 1528-0020. 138(2021), 19, Seite 1870-1884
DOI: 10.1182/blood.2021011557
Faure-Dupuy, Suzanne: Control of APOBEC3B induction and cccDNA decay by NF-κB and miR-138-5p / Suzanne Faure-Dupuy, Tobias Riedl, Maude Rolland, Zoheir Hizir, Florian Reisinger, Katharina Neuhaus… , 14 October 2021. - 14 S.
In: JHEP reports, ISSN 2589-5559. 3(2021), 6, Artikel-ID 100354, Seite 1-14
DOI: 10.1016/j.jhepr.2021.100354
Haggenmüller, Sarah: Skin cancer classification via convolutional neural networks : systematic review of studies involving human experts / Sarah Haggenmüller, Roman C. Maron, Achim Hekler, Jochen S. Utikal, Catarina Barata, Raymond L. Barn… , 8 September 2021. - 15 S.
In: European journal of cancer, ISSN 1879-0852. 156(2021), Seite 202-216
DOI: 10.1016/j.ejca.2021.06.049
Maron, Roman C.: A benchmark for neural network robustness in skin cancer classification / Roman C. Maron, Justin G. Schlager, Sarah Haggenmüller, Christof von Kalle, Jochen S. Utikal, Friede… , 11 August 2021. - 9 S.
In: European journal of cancer, ISSN 1879-0852. 155(2021), Seite 191-199
DOI: 10.1016/j.ejca.2021.06.047
Niemeyer, Charlotte: Response to upfront azacitidine in juvenile myelomonocytic leukemia in the AZA-JMML-001 trial / Charlotte M. Niemeyer, Christian Flotho, Daniel B. Lipka, Jan Starý, Claudia Rössig, André Baruchel,… , 23 July 2021. - 8 S.
In: Blood advances, ISSN 2473-9537. 5(2021), 14, Seite 2901-2908
DOI: 10.1182/bloodadvances.2020004144
Höhn, Julia: Integrating patient data into skin cancer classification using convolutional neural networks : systematic review / Julia Höhn, MSc; Achim Hekler, MSc; Eva Krieghoff-Henning, PhD; Jakob Nikolas Kather, Prof Dr med; J… , 2.7.2021. - 14 S.
In: Journal of medical internet research, ISSN 1438-8871. 23(2021), 7, Artikel-ID e20708, Seite 1-14
DOI: 10.2196/20708
Höhn, Julia: Combining CNN-based histologic whole slide image analysis and patient data to improve skin cancer classification / Julia Höhn, Eva Krieghoff-Henning, Tanja B. Jutzi, Christof von Kalle, Jochen S. Utikal, Friedegund … , 7 April 2021. - 8 S.
In: European journal of cancer, ISSN 1879-0852. 149(2021) vom: Mai, Seite 94-101
DOI: 10.1016/j.ejca.2021.02.032
Horak, Peter: Comprehensive genomic and transcriptomic analysis for guiding therapeutic decisions in patients with rare cancers / Peter Horak, Christoph Heining, Simon Kreutzfeldt, Barbara Hutter, Andreas Mock, Jennifer Hullein, M… , June 10, 2021. - 16 S.
In: Cancer discovery, ISSN 2159-8290. 11(2021), 11, Seite 2780-2795
DOI: 10.1158/2159-8290.CD-21-0126
Maron, Roman C.: Robustness of convolutional neural networks in recognition of pigmented skin lesions / Roman C. Maron, Sarah Haggenmüller, Christof von Kalle, Jochen S. Utikal, Friedegund Meier, Frank F.… , 7 January 2021. - 11 S.
In: European journal of cancer, ISSN 1879-0852. 145(2021), Seite 81-91
DOI: 10.1016/j.ejca.2020.11.020
Niemöller, Christoph: Bisulfite-free epigenomics and genomics of single cells through methylation-sensitive restriction / Christoph Niemöller, Julius Wehrle, Julian Riba, Rainer Claus, Nathalie Renz, Janika Rhein, Sabine B… , 01 February 2021. - 10 S.
In: Communications biology, ISSN 2399-3642. 4(2021), Artikel-ID 153, Seite 1-10
DOI: 10.1038/s42003-021-01661-w
Sill, Martin: Molecular tumor classification using DNA methylome analysis / Martin Sill, Christoph Plass, Stefan M. Pfister and Daniel B. Lipka, 3 July 2020. - 9 S.
In: Human molecular genetics, ISSN 1460-2083. 29(2020), R2, Seite R205-R213
DOI: 10.1093/hmg/ddaa147
Mayakonda Thippeswamy, Anand: Methrix : an R/bioconductor package for systematic aggregation and analysis of bisulfite sequencing data / Anand Mayakonda, Maximilian Schönung, Joschka Hey, Rajbir Nath Batra, Clarissa Feuerstein-Akgoz, Kri… , 2020. - 2 S.
In: Bioinformatics, ISSN 1367-4811. 36(2020), 22/23, Seite 5524-5525
DOI: 10.1093/bioinformatics/btaa1048
Hekler, Achim: Effects of label noise on deep learning-based skin cancer classification / Achim Hekler, Jakob N. Kather, Eva Krieghoff-Henning, Jochen S. Utikal, Friedegund Meier, Frank F. G… , 06 May 2020. - 7 S.
In: Frontiers in medicine, ISSN 2296-858X. Bd. 7.2020, Art. 177, insgesamt 7 Seiten
DOI: 10.3389/fmed.2020.00177
Schönung, Maximilian: International consensus definition of DNA methylation subgroups in juvenile myelomonocytic leukemia / Maximilian Schönung, Julia Meyer, Peter Nöllke, Adam B. Olshen, Mark Hartmann, Norihiro Murakami, Ma… , 2021. - 11 S.
In: Clinical cancer research, ISSN 1557-3265. 27(2021), 1, Seite 158-168
DOI: 10.1158/1078-0432.CCR-20-3184
Wierzbińska, Justyna Anna: Methylome-based cell-of-origin modeling (Methyl-COOM) identifies aberrant expression of immune regulatory molecules in CLL / Justyna A. Wierzbinska, Reka Toth, Naveed Ishaque, Karsten Rippe, Jan-Philipp Mallm, Lara C. Klett, … , 18 March 2020. - 19 S.
In: Genome medicine, ISSN 1756-994X. 12(2020), Artikel-ID 29, Seite 1-19
DOI: 10.1186/s13073-020-00724-7
Goeppert, Benjamin: Integrative analysis defines distinct prognostic subgroups of intrahepatic cholangiocarcinoma / Benjamin Goeppert, Reka Toth, Stephan Singer, Thomas Albrecht, Daniel B. Lipka, Pavlo Lutsik, David … , 07 January 2019. - 16 S.
In: Hepatology, ISSN 1527-3350. 69(2019), 5, Seite 2091-2106
DOI: 10.1002/hep.30493
Garg, Swati: Hepatic leukemia factor is a novel leukemic stem cell regulator in DNMT3A, NPM1, and FLT3-ITD triple-mutated AML / Swati Garg, Armando Reyes-Palomares, Lixiazi He, Anne Bergeron, Vincent-Philippe Lavallée, Sébastien… , July 18 2019. - 14 S.
In: Blood, ISSN 1528-0020. 134(2019), 3, Seite 263-276
DOI: 10.1182/blood.2018862383
Lipka, Daniel: From basic knowledge to effective therapies / Daniel B. Lipka, Pavlo Lutsik, and Christoph Plass, 10 December 2018
In: Cancer cell, ISSN 1878-3686. 34(2018), 6, Seite 871-873
DOI: 10.1016/j.ccell.2018.11.013
Langstein, Jens: Impact of DNA methylation programming on normal and pre-leukemic hematopoiesis / Jens Langstein, Michael D. Milsom, Daniel B. Lipka, August 2018. - 12 S.
In: Seminars in cancer biology, ISSN 1096-3650. 51(2018), Seite 89-100
DOI: 10.1016/j.semcancer.2017.09.008
Schlereth, Katharina: The transcriptomic and epigenetic map of vascular quiescence in the continuous lung endothelium / Katharina Schlereth, Dieter Weichenhan, Tobias Bauer, Tina Heumann, Evangelia Giannakouri, Daniel Li… , 11 May 2018. - 23 S.
In: eLife, ISSN 2050-084X. 7(2018), Artikel-ID e34423, Seite 1-23
DOI: 10.7554/eLife.34423
Stieglitz, Elliot: Genome-wide DNA methylation is predictive of outcome in juvenile myelomonocytic leukemia / Elliot Stieglitz, Tali Mazor, Adam B. Olshen, Huimin Geng, Laura C. Gelston, Jon Akutagawa, Daniel B… , 19 December 2017. - 8 S.
In: Nature Communications, ISSN 2041-1723. 8(2017), Artikel-ID 2127, Seite 1-8
DOI: 10.1038/s41467-017-02178-9
Lipka, Daniel: RAS-pathway mutation patterns define epigenetic subclasses in juvenile myelomonocytic leukemia / Daniel B. Lipka, Tania Witte, Reka Toth, Jing Yang, Manuel Wiesenfarth, Peter Nöllke, Alexandra Fisc… , 19 December 2017. - 14 S.
In: Nature Communications, ISSN 2041-1723. 8(2017), Artikel-ID 2126, Seite 1-14
DOI: 10.1038/s41467-017-02177-w
Lipka, Daniel: Prolonged cellular midostaurin retention suggests potential alternative dosing strategies for FLT3-ITD-positive leukemias : letters to the editor / DB Lipka, M-C Wagner, M Dziadosz and T Fischer, 03 May 2016. - 4 S.
In: Leukemia, ISSN 1476-5551. 30(2016), 10, Seite 2090-2093
DOI: 10.1038/leu.2016.127
Schnöder, Tina: Epo-induced erythroid maturation is dependent on Plcγ1 signaling / TM Schnöder, P Arreba-Tutusaus, I Griehl, L Bullinger, M Buschbeck, SW Lane, K Döhner, C Plass, DB L… , 2015. - 12 S.
In: Cell death and differentiation, ISSN 1476-5403. 22(2015), 6, Seite 974-985
DOI: 10.1038/cdd.2014.186
Brocks, David: Intratumor DNA methylation heterogeneity reflects clonal evolution in aggressive prostate cancer / David Brocks, Yassen Assenov, Sarah Minner, Olga Bogatyrova, Ronald Simon, Christina Koop, Christoph… , 7 August 2014. - 9 S.
In: Cell reports, ISSN 2211-1247. 8(2014), Seite 798-806
DOI: 10.1016/j.celrep.2014.06.053
Lipka, Daniel: Identification of DNA methylation changes at cis-regulatory elements during early steps of HSC differentiation using tagmentation-based whole genome bisulfite sequencing / Daniel B. Lipka, Qi Wang, Nina Cabezas-Wallscheid, Daniel Klimmeck, Dieter Weichenhan, Carl Herrmann… , 10 December 2014. - 12 S.
In: Cell cycle, ISSN 1551-4005. 13(2014), 22, Seite 3476-3487
DOI: 10.4161/15384101.2014.973334
Cabezas Wallscheid, Nina: Identification of regulatory networks in HSCs and their immediate progeny via integrated proteome, transcriptome, and DNA methylome analysis / Nina Cabezas-Wallscheid, Daniel Klimmeck, Jenny Hansson, Daniel B. Lipka, Alejandro Reyes, Qi Wang, … , August 21, 2014. - 16 S.
In: Cell stem cell, ISSN 1875-9777. 15(2014), 4, Seite 507-522
DOI: 10.1016/j.stem.2014.07.005
Wagner, Marie-Christine: Nilotinib shows prolonged intracellular accumulation upon pulse-exposure : a novel mechanism for induction of apoptosis in CML cells : letter to the editor / M-C Wagner, M Dziadosz, JV Melo, F Heidel, T Fischer and DB Lipka, 2013. - 4 S.
In: Leukemia, ISSN 0887-6924. 27(2013), 7, Seite 1567-1570
DOI: 10.1038/leu.2012.364
Dziadosz, Marek: High-performance liquid chromatography with ultraviolet detection and protein precipitation as a way of quantitative determination of nilotinib with and without internal standard / Marek Dziadosz, Marie-Christine Wagner, Daniel B. Lipka, Thomas Fischer, Heidemarie Bartels, 2012. - 8 S.
In: Journal of liquid chromatography & related technologies, ISSN 1082-6076. 35(2012), 17, Seite 2503-2510
DOI: 10.1080/10826076.2011.636469
Lipka, Daniel: Molekulargenetische Charakterisierung der kritischen Deletionsregion bei myeloischen Leukämien in den chromosomalen Banden 7q22-q31.1. / vorgelegt von Daniel Lipka, 2003 [ersch.] 2006. - IV, 74 Bl. : Ill., graph. Darst.

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