heiBIB: Dieterich, Christoph

Dieterich, Christoph Prof. Dr. rer. nat.Universität HeidelbergHeidelberg

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englisch (102)
deutsch (3)

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Publikationen in heiBIB

Wagner, Rebecca E.: SRSF2 safeguards efficient transcription of DNA damage and repair genes / Rebecca E. Wagner, Leonie Arnetzl, Thiago Britto-Borges, Anke Heit-Mondrzyk, Ali Bakr, Etienne Solli… , 26 November 2024. - 26 S.
In: Cell reports, ISSN 2211-1247. 43(2024), 11, Artikel-ID 114869, Seite 1-26
DOI: 10.1016/j.celrep.2024.114869
Richter-Pechanski, Phillip: Clinical information extraction for lower-resource languages and domains with few-shot learning using pretrained language models and prompting / Phillip Richter-Pechanski, Philipp Wiesenbach, Dominic Mathias Schwab, Christina Kiriakou, Nicolas G… , 31 October 2024. - 24 S. : Illustrationen
In: Natural language processing, ISSN 2977-0424. (2024), Seite 1-24
DOI: 10.1017/nlp.2024.52
Gonzalo-Calvo, David de: Machine learning for catalysing the integration of noncoding RNA in research and clinical practice / David de Gonzalo-Calvo, Kanita Karaduzovic-Hadziabdic, Louise Torp Dalgaard, Christoph Dieterich, Ma… , 18 July 2024. - 16 S.
In: EBioMedicine, ISSN 2352-3964. 106(2024), Artikel-ID 105247, Seite 1-16
DOI: 10.1016/j.ebiom.2024.105247
Rabolli, Charles: Nanopore detection of METTL3-dependent m6A-modified mRNA reveals a new mechanism regulating cardiomyocyte mitochondrial metabolism / Charles P. Rabolli, BS, Isabel S. Naarmann-de Vries, PhD, Catherine A. Makarewich, PhD, Kedryn K. Ba… , Apr 2024. - 4 S. : Illustrationen
In: Circulation, ISSN 1524-4539. 149(2024), 16 vom: Apr., Seite 1319-1322
DOI: 10.1161/CIRCULATIONAHA.123.066473
Morandell, Jasmin: CircHTT(2,3,4,5,6) - co-evolving with the HTT CAG-repeat tract : modulates Huntington's disease phenotypes / Jasmin Morandell, Alan Monziani, Martina Lazioli, Deborah Donzel, Jessica Döring, Claudio Oss Pegora… , 10 September 2024. - 21 S. : Illustrationen
In: Molecular therapy, ISSN 2162-2531. 35(2024), 3 vom: Sept., Artikel-ID 102234, Seite 1-21
DOI: 10.1016/j.omtn.2024.102234
Chan, Adrian: Detecting m6A at single-molecular resolution via direct RNA sequencing and realistic training data / Adrian Chan, Isabel S. Naarmann-de Vries, Carolin P.M. Scheitl, Claudia Höbartner & Christoph Dieter… , 18 April 2024. - 8 S.
In: Nature Communications, ISSN 2041-1723. 15(2024), Artikel-ID 3323, Seite 1-8
DOI: 10.1038/s41467-024-47661-2
Gjerga, Enio: Transverse aortic constriction multi-omics analysis uncovers pathophysiological cardiac molecular mechanisms / Enio Gjerga, Matthias Dewenter, Thiago Britto-Borges, Johannes Grosso, Frank Stein, Jessica Eschenba… , 20 July 2024. - 10 S.
In: Database, ISSN 1758-0463. 2024(2024), Artikel-ID baae060, Seite 1-10
DOI: 10.1093/database/baae060
Britto-Borges, Thiago: NMDtxDB: data-driven identification and annotation of human NMD target transcripts / Thiago Britto-Borges, Niels H. Gehring, Volker Boehm, and Christoph Dieterich, October 2024. - 16 S. : Illustrationen
In: RNA, ISSN 1469-9001. 30(2024), 10, Seite 1277-1291
DOI: 10.1261/rna.080066.124
Lorenzo, Jose Paulo: APOBEC2 safeguards skeletal muscle cell fate through binding chromatin and regulating transcription of non-muscle genes during myoblast differentiation / J. Paulo Lorenzo, Linda Molla, Elias Moris Amro, Ignacio L. Ibarra, Sandra Ruf, Cedrik Neber, Christ… , April 16, 2024. - 12 S. : Illustrationen, Diagramme
In: Proceedings of the National Academy of Sciences of the United States of America, ISSN 1091-6490. 121(2024), 17, Artikel-ID e2312330121, Seite 1-12
DOI: 10.1073/pnas.2312330121
Tsvilovskyy, Volodymyr: OCaR1 endows exocytic vesicles with autoregulatory competence by preventing uncontrolled Ca2+ release, exocytosis, and pancreatic tissue damage / Volodymyr Tsvilovskyy, Roger Ottenheijm, Ulrich Kriebs, Aline Schütz, Kalliope Nina Diakopoulos, Arc… , 2024. - 16 S. : Illustrationen
In: The journal of clinical investigation, ISSN 1558-8238. 134(2024), 7, Artikel-ID e169428, Seite 1-15
DOI: 10.1172/JCI169428
Krefting, Dagmar: Herding cats in pandemic times : towards technological and organizational convergence of heterogeneous solutions for investigating and mastering the pandemic in university medical centers / Dagmar Krefting, Nico T. Mutters, Rüdiger Pryss, Martin Sedlmayr, Martin Boeker, Christoph Dieterich… , 2024. - 5 S.
In: MEDINFO 2023 - the 3uture is accessible. 310(2024), Seite 1271-1275
DOI: 10.3233/SHTI231169
Hartstock, Katja: MePMe-seq : antibody-free simultaneous m6A and m5C mapping in mRNA by metabolic propargyl labeling and sequencing / Katja Hartstock, Nadine A. Kueck, Petr Spacek, Anna Ovcharenko, Sabine Huewel, Nicolas V. Cornelisse… , 07 November 2023. - 19 S. : Illustrationen, Diagramme
In: Nature Communications, ISSN 2041-1723. 14(2023), Artikel-ID 7154, Seite 1-19
DOI: 10.1038/s41467-023-42832-z
Trendel, Jakob: PEPseq quantifies transcriptome-wide changes in protein occupancy and reveals selective translational repression after translational stress / Jakob Trendel, Etienne Boileau, Marco Jochem, Christoph Dieterich and Jeroen Krijgsveld, 11 August 2023. - 20 S. : Illustrationen
In: Nucleic acids research, ISSN 1362-4962. 51(2023), 14, Seite 1-20
DOI: 10.1093/nar/gkad557
Naarmann-de Vries, Isabel S.: Adaptive sampling for nanopore direct RNA-sequencing / Isabel S. Naarmann-de Vries, Enio Gjerga, Catharina L. A. Gandor and Christoph Dieterich, September 6, 2023. - 11 S.
In: RNA, ISSN 1469-9001. 29(2023), 12, Seite 1939-1949
DOI: 10.1261/rna.079727.123
Naarmann-de Vries, Isabel S.: Comprehensive identification of diverse ribosomal RNA modifications by targeted nanopore direct RNA sequencing and JACUSA2 / Isabel S. Naarmann-de Vries, Christiane Zorbas, Amina Lemsara, Michael Piechotta, Felix G. M. Ernst,… , 27 Aug 2023. - 14 S.
In: RNA biology, ISSN 1555-8584. 20(2023), 1, Seite 652-665
DOI: 10.1080/15476286.2023.2248752
Sun, Yu: Detection of queuosine and queuosine precursors in tRNAs by direct RNA sequencing / Yu Sun, Michael Piechotta, Isabel Naarmann-de Vries, Christoph Dieterich and Ann E. Ehrenhofer-Murra… , 10 November 2023. - 16 S. : Illustrationen
In: Nucleic acids research, ISSN 1362-4962. 51(2023), 20 vom: Nov., Seite 11197-11212
DOI: 10.1093/nar/gkad826
Grosch, Markus: Striated muscle-specific base editing enables correction of mutations causing dilated cardiomyopathy / Markus Grosch, Laura Schraft, Adrian Chan, Leonie Küchenhoff, Kleopatra Rapti, Anne-Maud Ferreira, J… , 2023. - 15 S. : Illustrationen
In: Nature Communications, ISSN 2041-1723. 14(2023), Artikel-ID 3714, Seite 1-15
DOI: 10.1038/s41467-023-39352-1
Gjerga, Enio: Characterizing alternative splicing effects on protein interaction networks with LINDA / Enio Gjerga, Isabel S. Naarmann-de Vries, Christoph Dieterich, June 2023. - 7 S. : Illustrationen
In: Bioinformatics, ISSN 1367-4811. 39(2023), Supplement_1, Seite i458-i464
DOI: 10.1093/bioinformatics/btad224
Bruns, Bastian: Calcineurin signaling promotes takotsubo syndrome / Bastian Bruns, Marilena Antoniou, Irena Baier, Maximilian Joos, Meryem Sevinchan, Marie-Christine Mo… , 13 July 2023. - 11 S.
In: Nature cardiovascular research, ISSN 2731-0590. 2(2023), 7, Seite 645-655
DOI: 10.1038/s44161-023-00296-w
Richter-Pechanski, Phillip: A distributable German clinical corpus containing cardiovascular clinical routine doctor’s letters / Phillip Richter-Pechanski, Philipp Wiesenbach, Dominic M. Schwab, Christina Kiriakou, Mingyang He, M… , 14 April 2023. - 16 S.
In: Scientific data, ISSN 2052-4463. 10(2023) vom: Apr., Artikel-ID 207, Seite 1-16
DOI: 10.1038/s41597-023-02128-9
Schlautmann, Lena P.: Exon junction complex-associated multi-adapter RNPS1 nucleates splicing regulatory complexes to maintain transcriptome surveillance / Lena P. Schlautmann, Jan-Wilm Lackmann, Janine Altmüller, Christoph Dieterich, Volker Boehm and Niel… , 30 May 2022. - 20 S. : Illustrationen
In: Nucleic acids research, ISSN 1362-4962. 50(2022), 10, Seite 5899-5918
DOI: 10.1093/nar/gkac428
Wallmeroth, Damaris: Human UPF3A and UPF3B enable fault‐tolerant activation of nonsense‐mediated mRNA decay / Damaris Wallmeroth, Jan‐Wilm Lackmann, Sabrina Kueckelmann, Janine Altmüller, Christoph Dieterich, V… , 22 April 2022. - 23 S. : Illustrationen
In: The EMBO journal, ISSN 1460-2075. 41(2022), 10, Artikel-ID e109191, Seite 1-23
DOI: 10.15252/embj.2021109191
Patel, Areeba: Rapid-CNS2: rapid comprehensive adaptive nanopore-sequencing of CNS tumors, a proof-of-concept study : correspondence / Areeba Patel, Helin Dogan, Alexander Payne, Elena Krause, Philipp Sievers, Natalie Schoebe, Daniel S… , 31 March 2022. - 4 S. : Illustrationen
In: Acta neuropathologica, ISSN 1432-0533. 143(2022), 5, Seite 609-612
DOI: 10.1007/s00401-022-02415-6
Josipovic, Natasa: circRAB3IP modulates cell proliferation by reorganizing gene expression and mRNA processing in a paracrine manner / Natasa Josipovic, Karoline K. Ebbesen, Anne Zirkel, Adi Danieli-Mackay, Christoph Dieterich, Leo Kur… , August 16, 2022. - 15 S.
In: RNA, ISSN 1469-9001. 28(2022), 11 vom: Nov., Seite 1481-1495
DOI: 10.1261/rna.079195.122
Britto-Borges, Thiago: Magnetique : an interactive web application to explore transcriptome signatures of heart failure / Thiago Britto-Borges, Annekathrin Ludt, Etienne Boileau, Enio Gjerga, Federico Marini and Christoph … , 07 November 2022. - 9 S.
In: Journal of translational medicine, ISSN 1479-5876. 20(2022), Artikel-ID 513, Seite 1-9
DOI: 10.1186/s12967-022-03694-z
Lerchenmüller, Carolin: Restoration of cardiomyogenesis in aged mouse hearts by voluntary exercise / Carolin Lerchenmüller, MD; Ana Vujic, PhD; Sonja Mittag, MD; Annie Wang, BS; Charles P. Rabolli, BS;… , 6 Jul 2022. - 15 S.
In: Circulation, ISSN 1524-4539. 146(2022), 5 vom: Aug., Seite 412-426
DOI: 10.1161/CIRCULATIONAHA.121.057276
Dieterich, Christoph: CARDIO:DE / Christoph Dieterich. -
Heidelberg: Universität, 2022-11-24. - 1 Online-Ressource (2 Files)
DOI: 10.11588/data/AFYQDY
Rajcsanyi, Luisa Sophie: Evidence for correlations between BMI-associated SNPs and circRNAs / Luisa Sophie Rajcsanyi, Inga Diebels, Lydia Pastoors, Deniz Kanber, Triinu Peters, Anna-Lena Volckma… , 25 July 2022. - 13 S.
In: Scientific reports, ISSN 2045-2322. 12(2022), Artikel-ID 12643, Seite 1-13
DOI: 10.1038/s41598-022-16495-7
Boileau, Etienne: Full-length spatial transcriptomics reveals the unexplored isoform diversity of the myocardium post-MI / Etienne Boileau, Xue Li, Isabel S Naarmann-de Vries, Christian Becker, Ramona Casper, Janine Altmüll… , 22 July 2022. - 11 S.
In: Frontiers in genetics, ISSN 1664-8021. 13(2022) vom: Juli, Artikel-ID 912572, Seite 1-11
DOI: 10.3389/fgene.2022.912572
Naarmann-de Vries, Isabel S.: Targeted analysis of circRNA expression in patient samples by lexo-circSeq / Isabel S. Naarmann-de Vries, Jessica Eschenbach, Sarah Schudy, Benjamin Meder and Christoph Dieteric… , 08 June 2022. - 10 S.
In: Frontiers in molecular biosciences, ISSN 2296-889X. 9(2022) vom: Aug., Artikel-ID 875805, Seite 1-10
DOI: 10.3389/fmolb.2022.875805
Heumüller, Andreas: Locus-conserved circular RNA cZNF292 controls endothelial cell flow responses / Andreas W. Heumüller, Alisha N. Jones, André Mourão, Marius Klangwart, Chenyue Shi, Ilka Wittig, Ari… , 7 January 2022. - 13 S.
In: Circulation research, ISSN 1524-4571. 130(2022), 1, Seite 67-79
DOI: 10.1161/CIRCRESAHA.121.320029
Sommer, Kim K.: Structured, harmonized, and interoperable integration of clinical routine data to compute heart failure risk scores / Kim K. Sommer, Ali Amr, Udo Bavendiek, Felix Beierle, Peter Brunecker, Henning Dathe, Jürgen Eils, M… , 18 May 2022. - 18 S.
In: Life, ISSN 2075-1729. 12(2022), 5, special issue, Artikel-ID 749, Seite 1-18
DOI: 10.3390/life12050749
Naarmann-de Vries, Isabel S.: Improved nanopore direct RNA sequencing of cardiac myocyte samples by selective mt-RNA depletion / Isabel S. Naarmann-de Vries, Jessica Eschenbach, Christoph Dieterich, 2022. - 12 S.
In: Journal of molecular and cellular cardiology, ISSN 1095-8584. 163(2022), Seite 175-186
DOI: 10.1016/j.yjmcc.2021.10.010
Piechotta, Michael: RNA modification mapping with JACUSA2 / Michael Piechotta, Isabel S. Naarmann-de Vries, Qi Wang, Janine Altmüller and Christoph Dieterich, 16 May 2022. - 11 S.
In: Genome biology, ISSN 1474-760X. 23(2022), Artikel-ID 115, Seite 1-11
DOI: 10.1186/s13059-022-02676-0
Daswani, Reetu Ramesh: MicroRNA-138 controls hippocampal interneuron function and short-term memory in mice / Reetu Daswani, Carlotta Gilardi, Michael Soutschek, Prakruti Nanda, Kerstin Weiss, Silvia Bicker, Ro… , 15 March 2022. - 24 S.
In: eLife, ISSN 2050-084X. 11(2022), Artikel-ID e74056, Seite 1-24
DOI: 10.7554/eLife.74056
Bencun, Maja: New tricks with old dogs : computational identification and experimental validation of new miRNA-mRNA regulation in hiPSC-CMs / Maja Bencun, Thiago Britto-Borges, Jessica Eschenbach and Christoph Dieterich, 6 February 2022. - 17 S.
In: Biomedicines, ISSN 2227-9059. 10(2022), 2, Artikel-ID 391, Seite 1-17
DOI: 10.3390/biomedicines10020391
Froese, Natali: Analysis of myocardial cellular gene expression during pressure overload reveals matrix based functional intercellular communication / Natali Froese, Julio Cordero, Aya Abouissa, Felix A. Trogisch, Steve Grein, Malgorzata Szaroszyk, Yo… , March 18, 2022. - 29 S.
In: iScience, ISSN 2589-0042. 25(2022), 3 vom: 18. März, Artikel-ID 103965, Seite 1-29
DOI: 10.1016/j.isci.2022.103965
Günther, Stefan: Deciphering heterogeneity of splicing events of adult murine cardiomyocytes on single cell level : Abschlussbericht : Projekttyp: shared expertise : Laufzeit des Projektes: 01.01.2020-30.06.2021 / Zuwendungsempfänger: Max-Planck-Institut für Herz- und Lungenforschung ; Projektleiter: Dr. Stefan G… . -
Bad Nauheim: [Max-Planck-Institut für Herz- und Lungenforschung], 22.11.2021. - 1 Online-Ressource (10 Seiten, 253,21 KB) : Diagramme
DOI: 10.2314/KXP:1830424831
Günther, Stefan: Deciphering heterogeneity of splicing events of adult murine cardiomyocytes on single cell level : Abschlussbericht : Projekttyp: Shared expertise : Laufzeit des Projektes: 01.01.2020-30.06.2021 / Zuwendungsempfänger: Max-Planck-Institut für Herz- und Lungenforschung ; Projektleiter: Dr. Stefan G… . -
Bad Nauheim: Max-Planck-Institut für Herz- und Lungenforschung, 22.11.2021. - 9 Blätter, 1 ungezähltes Blatt : Diagramme
Górska, Aga: Muscle-specific Cand2 is translationally upregulated by mTORC1 and promotes adverse cardiac remodeling / Agnieszka A Górska, Clara Sandmann, Eva Riechert, Christoph Hofmann, Ellen Malovrh, Eshita Varma, Vi… , 4 October 2021. - 19 S.
In: EMBO reports, ISSN 1469-3178. 22(2021), 12, Artikel-ID e52170, Seite 1-19
DOI: 10.15252/embr.202052170
Lin, Rixing: Circular RNA circCCNT2 is upregulated in the anterior cingulate cortex of individuals with bipolar disorder / Rixing Lin, Juan Pablo Lopez, Cristiana Cruceanu, Caroline Pierotti, Laura M. Fiori, Alessio Squassi… , 10 December 2021. - 8 S.
In: Translational Psychiatry, ISSN 2158-3188. 11(2021), Artikel-ID 629, Seite 1-8
DOI: 10.1038/s41398-021-01746-4
Bandiera, Roberto: RN7SK small nuclear RNA controls bidirectional transcription of highly expressed gene pairs in skin / Roberto Bandiera, Rebecca E. Wagner, Thiago Britto-Borges, Christoph Dieterich, Sabine Dietmann, Sus… , 07 October 2021. - 14 S.
In: Nature Communications, ISSN 2041-1723. 12(2021), Artikel-ID 5864, Seite 1-14
DOI: 10.1038/s41467-021-26083-4
Radke, Michael: Therapeutic inhibition of RBM20 improves diastolic function in a murine heart failure model and human engineered heart tissue / Michael H. Radke, Victor Badillo-Lisakowski, Thiago Britto-Borges, Dieter A. Kubli, René Jüttner, Pr… , 1 Dec 2021. - 11 S.
In: Science translational medicine, ISSN 1946-6242. 13(2021), 622, Artikel-ID eabe8952, Seite 1-11
DOI: 10.1126/scitranslmed.abe8952
Boileau, Etienne: A comparison of metabolic labeling and statistical methods to infer genome-wide dynamics of RNA turnover / Etienne Boileau, Janine Altmüller, Isabel S. Naarmann-de Vries and Christoph Dieterich, 07 July 2021. - 14 S.
In: Briefings in bioinformatics, ISSN 1477-4054. 22(2021), 6, Artikel-ID bbab219, Seite 1-14
DOI: 10.1093/bib/bbab219
Richter-Pechanski, Phillip: Automatic extraction of 12 cardiovascular concepts from German discharge letters using pre-trained language models : $hPhillip Richter-Pechanski, Nicolas A Geis, Christina Kiriakou, Dominic M Schwab and Christoph Dieterich, November 26, 2021. - 10 S.
In: Digital health, ISSN 2055-2076. 7(2021), Artikel-ID 20552076211057662, Seite 1-10
DOI: 10.1177/20552076211057662
Körtel, Nadine: Deep and accurate detection of m6A RNA modifications using miCLIP2 and m6Aboost machine learning / Nadine Körtel, Cornelia Rücklé, You Zhou, Anke Busch, Peter Hoch-Kraft, F.X. Reymond Sutandy, Jacob … , 20 September 2021. - 19 S.
In: Nucleic acids research, ISSN 1362-4962. 49(2021), 16, Artikel-ID e92, Seite 1-19
DOI: 10.1093/nar/gkab485
Boileau, Etienne: Corrigendum: A multi-network comparative analysis of transcriptome and translatome identifies novel hub genes in cardiac remodeling / Etienne Boileau, Shirin Doroudgar, Eva Riechert, Lonny Jürgensen, Thanh Cao Ho, Hugo A. Katus, Mirko… , 17 June 2021. - 1 S.
In: Frontiers in genetics, ISSN 1664-8021. 12(2021), Artikel-ID 706542
DOI: 10.3389/fgene.2021.706542
Wagner, Julian Uwe Gabriel: Increased susceptibility of human endothelial cells to infections by SARS-CoV-2 variants / Julian U.G. Wagner, Denisa Bojkova, Mariana Shumliakivska, Guillermo Luxán, Luka Nicin, Galip S. Asl… , 1 June 2021. - 12 S.
In: Basic research in cardiology, ISSN 1435-1803. 116(2021), Artikel-ID 42, Seite 1-12
DOI: 10.1007/s00395-021-00882-8
Wang, Qi: Single-cell transcriptome sequencing on the Nanopore platform with ScNapBar / Qi Wang, Sven Bönigk, Volker Böhm, Niels Gehring, Janine Altmüller and Christoph Dieterich, April 27, 2021. - 8 S.
In: RNA, ISSN 1469-9001. 27(2021), 7, Seite 763-770
DOI: 10.1261/rna.078154.120
Böhm, Volker: SMG5-SMG7 authorize nonsense-mediated mRNA decay by enabling SMG6 endonucleolytic activity / Volker Boehm, Sabrina Kueckelmann, Jennifer V. Gerbracht, Sebastian Kallabis, Thiago Britto-Borges, … , 25 June 2021. - 19 S.
In: Nature Communications, ISSN 2041-1723. 12(2021), Artikel-ID 3965, Seite 1-19
DOI: 10.1038/s41467-021-24046-3
Hesse, Julia: Single-cell transcriptomics defines heterogeneity of epicardial cells and fibroblasts within the infarcted murine heart / Julia Hesse, Christoph Owenier, Tobias Lautwein, Ria Zalfen, Jonas F Weber, Zhaoping Ding, Christina… , 21 June 2021. - 21 S.
In: eLife, ISSN 2050-084X. 10(2021), Artikel-ID e65921, Seite 1-21
DOI: 10.7554/eLife.65921
Worpenberg, Lina: Ythdf is a N6-methyladenosine reader that modulates Fmr1 target mRNA selection and restricts axonal growth in Drosophila / Lina Worpenberg, Chiara Paolantoni, Sara Longhi, Miriam M Mulorz, Tina Lence, Hans-Hermann Wessels, … , 11 January 2021. - 20 S.
In: The EMBO journal, ISSN 1460-2075. 40(2021), 4 vom: Feb., Artikel-ID e104975, Seite 1-20
DOI: 10.15252/embj.2020104975
Joglekar, Anoushka: A spatially resolved brain region- and cell type-specific isoform atlas of the postnatal mouse brain / Anoushka Joglekar, Andrey Prjibelski, Ahmed Mahfouz, Paul Collier, Susan Lin, Anna Katharina Schlusc… , 19 January 2021. - 16 S.
In: Nature Communications, ISSN 2041-1723. 12(2021), Artikel-ID 463, Seite 1-16
DOI: 10.1038/s41467-020-20343-5
Camacho Londoño, Juan Eduardo: Transcriptional signatures regulated by TRPC1/C4-mediated background Ca 2+ entry after pressure-overload induced cardiac remodelling / Juan E. Camacho Londoño, Vladimir Kuryshev, Markus Zorn, Kathrin Saar, Qinghai Tian, Norbert Hübner,… , 2021. - 19 S.
In: Progress in biophysics & molecular biology, ISSN 1873-1732. 159(2021), Seite 86-104
DOI: 10.1016/j.pbiomolbio.2020.07.006
Müller, Torsten: Updated and enhanced pig cardiac transcriptome based on long-read RNA sequencing and proteomics / Torsten Müller, Etienne Boileau, Sweta Talyan, Dorothea Kehr, Karl Varadi, Martin Busch, Patrick Mos… , 2021. - 9 S.
In: Journal of molecular and cellular cardiology, ISSN 1095-8584. 150(2021), Seite 23-31
DOI: 10.1016/j.yjmcc.2020.10.005
Weigelt, Carina Marianne: An insulin-sensitive circular RNA that regulates lifespan in drosophila / Carina Marianne Weigelt, Rohan Sehgal, Luke Stephen Tain, Jun Cheng, Jacqueline Esser, Andre Pahl, C… , Jul 16 2020. - 12 S.
In: Molecular cell, ISSN 1097-4164. 79(2020), 2, Seite 268-279
DOI: 10.1016/j.molcel.2020.06.011
Gerbracht, Jennifer V.: CASC3 promotes transcriptome-wide activation of nonsense-mediated decay by the exon junction complex / Jennifer V. Gerbracht, Volker Boehm, Thiago Britto-Borges, Sebastian Kallabis, Janica L. Wiederstein… , 4 July 2020. - 19 S.
In: Nucleic acids research, ISSN 1362-4962. 48(2020), 15, Seite 8626-8644
DOI: 10.1093/nar/gkaa564
Boileau, Etienne: A multi-network comparative analysis of transcriptome and translatome identifies novel hub genes in cardiac remodeling / Etienne Boileau, Shirin Doroudgar, Eva Riechert, Lonny Jürgensen, Thanh Cao Ho, Hugo A. Katus, Mirko… , 16 November 2020. - 11 S.
In: Frontiers in genetics, ISSN 1664-8021. 11(2020) Artikel-Nummer 583124, 11 Seiten
DOI: 10.3389/fgene.2020.583124
Kapoor, Utkarsh: ADAR-deficiency perturbs the global splicing landscape in mouse tissues / Utkarsh Kapoor, Konstantin Licht, Fabian Amman, Tobias Jakobi, David Martin, Christoph Dieterich, an… , July 29, 2020. - 12 S.
In: Genome research, ISSN 1549-5469. 30(2020), 8, Seite 1107-1118
DOI: 10.1101/gr.256933.119
Weichmann, Franziska: Validation strategies for antibodies targeting modified ribonucleotides / Franziska Weichmann, Robert Hett, Aloys Schepers, Taku Ito-Kureha, Andrew Flatley, Kaouthar Slama, F… , July 7, 202. - 18 S.
In: RNA, ISSN 1469-9001. 26(2020), 10, Seite 1489-1506
DOI: 10.1261/rna.076026.120
Jakobi, Tobias: Deep characterization of circular RNAs from human cardiovascular cell models and cardiac tissue / Tobias Jakobi, Dominik Siede, Jessica Eschenbach, Andreas W. Heumüller, Martin Busch, Rouven Nietsch… , 4 July 2020. - 25 S.
In: Cells, ISSN 2073-4409. 9(2020,7) Artikel-Nummer 1616, 25 Seiten
DOI: 10.3390/cells9071616
Pradas-Juni, Marta: A MAFG-lncRNA axis links systemic nutrient abundance to hepatic glucose metabolism / Marta Pradas-Juni, Nils R. Hansmeier, Jenny C. Link, Elena Schmidt, Bjørk Ditlev Larsen, Paul Klemm,… , 31 January 2020. - 17 S. : Illustrationen
In: Nature Communications, ISSN 2041-1723. 11(2020) Artikel-Nummer 644, 17 Seiten
DOI: 10.1038/s41467-020-14323-y
Zhou, Yifei: A secreted microRNA disrupts autophagy in distinct tissues of Caenorhabditis elegans upon ageing / Yifei Zhou, Xueqing Wang, Mengjiao Song, Zhidong He, Guizhong Cui, Guangdun Peng, Christoph Dieteric… , 23 October 2019. - 14 S.
In: Nature Communications, ISSN 2041-1723. 10(2019) Article number: 4827, 14 Seiten
DOI: 10.1038/s41467-019-12821-2
Ahuja, Gaurav: Loss of genomic integrity induced by lysosphingolipid imbalance drives ageing in the heart / Gaurav Ahuja, Deniz Bartsch, Wenjie Yao, Simon Geissen, Stefan Frank, Aitor Aguirre, Nicole Russ, Ja… , 18 March 2019. - 20 S.
In: EMBO reports, ISSN 1469-3178. 20(2019,4) Artikel-Nummer e47407, 20 Seiten
DOI: 10.15252/embr.201847407
Uvarovskii, Alexey: On the optimal design of metabolic RNA labeling experiments / Alexey Uvarovskii, Isabel S. Naarmann-de Vries, Christoph Dieterich, August 7, 2019. - 22 S.
In: PLoS Computational Biology, ISSN 1553-7358. 15(2019,8) Artikel-Nummer e1007252, 22 Seiten
DOI: 10.1371/journal.pcbi.1007252
Jebessa, Zegeye Hailu: The lipid-droplet-associated protein ABHD5 protects the heart through proteolysis of HDAC4 / Zegeye H. Jebessa, Kumar D. Shanmukha, Matthias Dewenter, Lorenz H. Lehmann, Chang Xu, Friederike Sc… , 15 November 2019. - 11 S.
In: Nature metabolism, ISSN 2522-5812. 1(2019), 11, Seite 1157-1167
DOI: 10.1038/s42255-019-0138-4
Hosseinzadeh, Ava: Stable redox-cycling nitroxide tempol has antifungal and immune-modulatory properties / Ava Hosseinzadeh, Marios Stylianou, José Pedro Lopes, Daniel C. Müller, André Häggman, Sandra Holmbe… , 20 August 2019
In: Frontiers in microbiology, ISSN 1664-302X. 10(2019) Artikel-Nummer 1843, 13 Seiten
DOI: 10.3389/fmicb.2019.01843
Lackinger, Martin: A placental mammal-specific microRNA cluster acts as a natural brake for sociability in mice / Martin Lackinger, A. Özge Sungur, Reetu Daswani, Michael Soutschek, Silvia Bicker, Lea Stemmler, Tat… , 2019. - ? S.
In: EMBO reports, ISSN 1469-3178. 20(2019), 2, Seite e46429
DOI: 10.15252/embr.201846429
Doroudgar, Shirin: Monitoring cell-type-specific gene expression using ribosome profiling in vivo during cardiac hemodynamic stress / Shirin Doroudgar, Christoph Hofmann, Etienne Boileau, Brandon Malone, Eva Riechert, Agnieszka A. Gor… , August 2, 2019. - 18 S.
In: Circulation research, ISSN 1524-4571. 125(2019), 4, Seite 431-448
DOI: 10.1161/CIRCRESAHA.119.314817
Jakobi, Tobias: Computational approaches for circular RNA analysis / Tobias Jakobi, Christoph Dieterich, 20 February 2019. - 14 S.
In: Wiley interdisciplinary reviews, ISSN 1757-7012. 10(2019,3) Artikelnummer e1528, 14 Seiten
DOI: 10.1002/wrna.1528
Ignarski, Michael: The RNA-protein interactome of differentiated kidney tubular epithelial cells / Michael Ignarski, Constantin Rill, Rainer W.J. Kaiser, Madlen Kaldirim, René Neuhaus, Reza Esmaillie… , 2019. - 13 S.
In: Journal of the American Society of Nephrology, ISSN 1533-3450. 30(2019), 4, Seite 564-576
DOI: 10.1681/ASN.2018090914
Blackwood, Erik A.: ATF6 regulates cardiac hypertrophy by transcriptional induction of the mTORC1 activator, Rheb / Erik A. Blackwood, Christoph Hofmann, Michelle Santo Domingo, Alina S. Bilal, Anup Sarakki, Winston… , 4 Jan 2019. - 15 S.
In: Circulation research, ISSN 1524-4571. 124(2019), 1, Seite 79-93
DOI: 10.1161/CIRCRESAHA.118.313854
Worpenberg, Lina: Identification of methylated transcripts using the TRIBE approach / Lina Worpenberg, Tobias Jakobi, Christoph Dieterich, Jean-Yves Roignant, 2019. - 18 S.
In: Epitranscriptomics. (2019), Seite 89-106
DOI: 10.1007/978-1-4939-8808-2_7
Jakobi, Tobias: Deep computational circular RNA analytics from RNA-seq data / Tobias Jakobi, Christoph Dieterich, 11 January 2018. - 17 S.
In: Circular RNAs. (2018), Seite 9-25
DOI: 10.1007/978-1-4939-7562-4_2
Boileau, Etienne: RNA modification level estimation with pulseR / Etienne Boileau andChristoph Dieterich, 10 December 2018. - 8 S.
In: Genes, ISSN 2073-4425. 9(2018,12) Artikel-Nummer 619, 8 Seiten
DOI: 10.3390/genes9120619
Böhm, Volker: Exon junction complexes suppress spurious splice sites to safeguard transcriptome integrity / Volker Boehm, Thiago Britto-Borges, Anna-Lena Steckelberg, Kusum K. Singh, Jennifer V. Gerbracht, El… , November 1, 2018. - 14 S.
In: Molecular cell, ISSN 1097-4164. 72(2018,12) Artikel-Nummer e 7, 14 Seiten
DOI: 10.1016/j.molcel.2018.08.030
Richter-Pechanski, Phillip: De-Identification of German medical admission notes / Phillip Richter-Pechanski, Stefan Riezler and Christoph Dieterich, [2018]. - 5 S.
In: German medical data sciences. 253(2018), Seite 165-169
DOI: 10.3233/978-1-61499-896-9-165
Jakobi, Tobias: Circtools - a one-stop software solution for circular RNA research / Tobias Jakobi, Alexey Uvarovskii and Christoph Dieterich, 21 November 2018. - 3 S.
In: Bioinformatics, ISSN 1367-4811. 35(2019), 13, Seite 2326-2328
DOI: 10.1093/bioinformatics/bty948
Haarbrandt, Birger: HiGHmed : an open platform approach to enhance care and research across institutional boundaries / Birger Haarbrandt, Björn Schreiweis, Sabine Rey, Ulrich Sax, Simone Scheithauer, Otto Rienhoff, Petr… , 17. Juli 2018. - 16 S.
In: Methods of information in medicine, ISSN 2511-705X. 57(2018), S 01, Seite e66-e81
DOI: 10.3414/ME18-02-0002
Dal Magro, Christina: A vastly increased chemical variety of RNA modifications containing a thioacetal structure / Christina Dal Magro, Patrick Keller, Annika Kotter, Stephan Werner, Victor Duarte, Virginie Marchand… , 06 April 2018. - 5 S.
In: Angewandte Chemie, ISSN 1521-3773. 57(2018), 26, Seite 7893-7897
DOI: 10.1002/anie.201713188
Boeckel, Jes-Niels: Identification and regulation of the long non-coding RNA Heat2 in heart failure / Jes-Niels Boeckel, Maya F. Perret, Simone F. Glaser, Timon Seeger, Andreas W. Heumüller, Wei Chen, D… , 2019. - 10 S.
In: Journal of molecular and cellular cardiology, ISSN 1095-8584. 126(2019), Seite 13-22
DOI: 10.1016/j.yjmcc.2018.11.004
Saez, Isabel: Insights into the ubiquitin-proteasome system of human embryonic stem cells / Isabel Saez, Seda Koyuncu, Ricardo Gutierrez-Garcia, Christoph Dieterich & David Vilchez, 06 March 2018
In: Scientific reports, ISSN 2045-2322. 8(2018) Artikel-Nummer 4092, 21 Seiten
DOI: 10.1038/s41598-018-22384-9
Pedrosa da Costa Gomes, Clarissa: Circular RNAs in the cardiovascular system / Clarissa P.C. Gomes, Antonio Salgado-Somoza, Esther E. Creemers, Christoph Dieterich, Mitja Lustrek,… , 25 February 2018. - 11 S.
In: Non-coding RNA research, ISSN 2468-0540. 3(2018), 1, Seite 1-11
DOI: 10.1016/j.ncrna.2018.02.002
Circular RNAs : Methods and Protocols / edited by Christoph Dieterich, Argyris Papantonis. -
New York, NY: Humana Press, 2018. - Online-Ressource (XIII, 220 p. 50 illus., 33 illus. in color, online resource), ISBN 978-1-4939-7562-4
(Springer eBook Collection)
(SpringerLink : Bücher)
(Methods in Molecular Biology ; 1724)
DOI: 10.1007/978-1-4939-7562-4
Circular RNAs : methods and protocols / edited by Christoph Dieterich, Argyris Papantonis. -
New York, NY: Humana Press, [2018]. - xiii, 220 Seiten : Illustrationen, ISBN 978-1-4939-7561-7
(Methods in molecular biology ; 1724)
(Springer protocols)
Tain, Luke S.: A proteomic atlas of insulin signalling reveals tissue-specific mechanisms of longevity assurance / Luke S Tain, Robert Sehlke, Chirag Jain, Manopriya Chokkalingam, Nagarjuna Nagaraj, Paul Essers, Mar… , 15 September 2017. - 19 S.
In: Molecular systems biology, ISSN 1744-4292. 13(2017,9) Artikel-Nummer 939, 19 Seiten
DOI: 10.15252/msb.20177663
Rajman, Marek: A microRNA-129-5p/Rbfox crosstalk coordinates homeostatic downscaling of excitatory synapses / Marek Rajman, Franziska Metge, Roberto Fiore, Sharof Khudayberdiev, Ayla Aksoy‐Aksel, Silvia Bicker,… , 14 June 2017. - 18 S.
In: The EMBO journal, ISSN 1460-2075. 36(2017), 12, Seite 1770-1787
DOI: 10.15252/embj.201695748
Meyer, Sören: The cardiac microenvironment uses non‐canonical WNT signaling to activate monocytes after myocardial infarction / Ingmar Sören Meyer, Andreas Jungmann, Christoph Dieterich, Min Zhang, Felix Lasitschka, Susann Werkm… , August 3, 2017. - 15 S.
In: EMBO molecular medicine, ISSN 1757-4684. 9(2017), 9, Seite 1279-1293
DOI: 10.15252/emmm.201707565
Metge, Franziska: FUCHS - towards full circular RNA characterization using RNAseq / Franziska Metge, Lisa F. Czaja-Hasse, Richard Reinhardt, Christoph Dieterich, 28 February 2017. - 14 S.
In: PeerJ, ISSN 2167-8359. 5(2017), Artikel-ID e2934
DOI: 10.7717/peerj.2934
Malone, Brandon: Bayesian prediction of RNA translation from ribosome profiling / Brandon Malone, Ilian Atanassov, Florian Aeschimann, Xinping Li, Helge Großhans and Christoph Dieter… , 25 January 2017. - 13 S.
In: Nucleic acids research, ISSN 1362-4962. 45(2017), 6, Seite 2960-2972
DOI: 10.1093/nar/gkw1350
Uvarovskii, Alexey: pulseR : versatile computational analysis of RNA turnover from metabolic labeling experiments / Alexey Uvarovskii and Christoph Dieterich. - 3 S.
In: Bioinformatics, ISSN 1367-4811. 33(2017), 20, S. 3305-3307
DOI: 10.1093/bioinformatics/btx368
Siede, Dominik: Identification of circular RNAs with host gene-independent expression in human model systems for cardiac differentiation and disease / Siede D., Rapti K., Gorska A.A., Katus H.A., Altmüller J., Boeckel J.N., Meder B., Maack C., Völkers… , 1 July 2017. - 9 S.
In: Journal of molecular and cellular cardiology, ISSN 1095-8584. 109(2017), Seite 48-56
DOI: 10.1016/j.yjmcc.2017.06.015
Roehr, Johannes: Flexbar 3.0 : SIMD and multicore parallelization / Johannes T. Roehr, Christoph Dieterich and Knut Reinert. - 2 S.
In: Bioinformatics, ISSN 1367-4811. 33(2017), 18, S. 2941-2942
DOI: 10.1093/bioinformatics/btx330
Lee, Hyun Ju: A post-transcriptional program coordinated by CSDE1 prevents intrinsic neural differentiation of human embryonic stem cells / Hyun Ju Lee, Deniz Bartsch, Cally Xiao, Santiago Guerrero, Gaurav Ahuja, Christina Schindler, James …
In: Nature Communications, ISSN 2041-1723. 8(2017) Artikel-Nummer 1456, 19 Seiten
DOI: 10.1038/s41467-017-01744-5
Sedaghat-Hamedani, Farbod: Clinical genetics and outcome of left ventricular non-compaction cardiomyopathy / Farbod Sedaghat-Hamedani, Jan Haas, Feng Zhu, Christian Geier, Elham Kayvanpour, Martin Liss, Alan L… , 06 October 2017. - 12 S.
In: European heart journal, ISSN 1522-9645. 38(2017), 46, Seite 3449-3460
DOI: 10.1093/eurheartj/ehx545
Ehret Kasemo, Totta: Dual RNA-seq reveals no plastic transcriptional response of the coccidian parasite Eimeria falciformis to host immune defenses / Totta Ehret; Simone Spork; Christoph Dieterich; Richard Lucius; Emanuel Heitlinger. -
London; Berlin; Heidelberg: BioMed Central; Springer, 2017. - 1 Online-Ressource
DOI: 10.1186/s12864-017-4095-6
Piechotta, Michael: JACUSA : site-specific identification of RNA editing events from replicate sequencing data / Michael Piechotta, Emanuel Wyler, Uwe Ohler, Markus Landthaler and Christoph Dieterich. -
London; Berlin; Heidelberg: BioMed Central; Springer, 2017. - 1 Online-Ressource (15 Seiten)
DOI: 10.1186/s12859-016-1432-8
Noormohammadi, Alireza: Somatic increase of CCT8 mimics proteostasis of human pluripotent stem cells and extends C. elegans lifespan / Alireza Noormohammadi, Amirabbas Khodakarami, Ricardo Gutierrez-Garcia, Hyun Ju Lee, Seda Koyuncu, T… , 28 Nov 2016. - 15 S.
In: Nature Communications, ISSN 2041-1723. 7(2016) Artikel-Nummer 13649, 15 Seiten
DOI: 10.1038/ncomms13649
Hinze, Florian: Reducing RBM20 activity improves diastolic dysfunction and cardiac atrophy / Florian Hinze, Christoph Dieterich, Michael H. Radke, Henk Granzier, Michael Gotthardt, 26 November 2016. - 10 S.
In: Journal of molecular medicine, ISSN 1432-1440. 94(2016), 12, Seite 1349-1358
DOI: 10.1007/s00109-016-1483-3
Kel, Ivan: SPIRE, a modular pipeline for eQTL analysis of RNA-Seq data, reveals a regulatory hotspot controlling miRNA expression in C. elegans / Ivan Kel, Zisong Chang, Nadia Galluccio, Margherita Romeo, Stefano Beretta, Luisa Diomede, Alessandr… , [2016]. - 12 S. : Illustrationen
In: Molecular BioSystems, ISSN 1742-2051. 12(2016), 11, Seite 3447-3458
DOI: 10.1039/C6MB00453A
Nakamura, Shuhei: Mondo complexes regulate TFEB via TOR inhibition to promote longevity in response to gonadal signals / Shuhei Nakamura, Özlem Karalay, Philipp S. Jäger, Makoto Horikawa, Corinna Klein, Kayo Nakamura, Chr… , 22 March 2016
In: Nature Communications, ISSN 2041-1723. 7(2016) Artikel-Nummer 10944, 15 Seiten
DOI: 10.1038/ncomms10944
Jakobi, Tobias: Profiling and validation of the circular RNA repertoire in adult murine hearts / Tobias Jakobi, Lisa F. Czaja-Hasse, Richard Reinhardt, Christoph Dieterich. - 8 S.
In: Genomics, proteomics & bioinformatics, ISSN 2210-3244. 14(2016), 4, S. 216-223
DOI: 10.1016/j.gpb.2016.02.003
Cheng, Jun: Specific identification and quantification of circular RNAs from sequencing data / Jun Cheng, Franziska Metge and Christoph Dieterich, 2016. - 3 S.
In: Bioinformatics, ISSN 1367-4811. 32(2016), 7, Seite 1094-1096
DOI: 10.1093/bioinformatics/btv656
Dieterich, Christoph: Comparative sequence analysis and association mining in gene regulation / Christoph Dieterich, [2005]. - Online-Ressource

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